setup target
#apply calibrations to runs:
cd /data/dp3.b/data/745/calibChunks
target -com "calibrate 745 1 141 610 . -rerun 1 -astromDir /data/dp3.b/data/745/astromf"
target -com "calibrate 745 2 141 610 . -rerun 1 -astromDir /data/dp3.b/data/745/astromf"
target -com "calibrate 745 3 141 610 . -rerun 1 -astromDir /data/dp3.b/data/745/astromf"
target -com "calibrate 745 4 141 610 . -rerun 1 -astromDir /data/dp3.b/data/745/astromf"
target -com "calibrate 745 5 141 610 . -rerun 1 -astromDir /data/dp3.b/data/745/astromf"
target -com "calibrate 745 6 141 610 . -rerun 1 -astromDir /data/dp3.b/data/745/astromf"
#a tsChunk file appropriate for this run was generated by hand

cd /data/dp3.b/data/752/calibChunks
target -com "calibrate 752 1 244 713 . -rerun 1 -astromDir /data/dp3.b/data/752/astromf"
target -com "calibrate 752 2 244 713 . -rerun 1 -astromDir /data/dp3.b/data/752/astromf"
target -com "calibrate 752 3 244 713 . -rerun 1 -astromDir /data/dp3.b/data/752/astromf"
target -com "calibrate 752 4 244 713 . -rerun 1 -astromDir /data/dp3.b/data/752/astromf"
target -com "calibrate 752 5 141 713 . -rerun 1 -astromDir /data/dp3.b/data/752/astromf"
target -com "calibrate 752 6 244 713 . -rerun 1 -astromDir /data/dp3.b/data/752/astromf"
#a tsChunk file appropriate for this run was generated by hand

#run target selection
# assume tsChunk file/tsPlan files made by hand
cd /data/dp3.b/data/745/target
target -com "targetSelectFromChunk tsPlan.par -fits 3"
cd /data/dp3.b/data/752/target
target -com "targetSelectFromChunk tsPlan.par -fits 3"

#these commands read the selected targets and cull out selected bad QSOs
#they unify all HDUs of a tsObjOut file into tiling input files.
target -com "taToTile tsPlan.par 1003-0 0 " >& err0
target -com "taToTile tsPlan.par 1003-1 1 " >>& err0
target -com "taToTile tsPlan.par 1003-2 2 " >>& err0
target -com "taToTile tsPlan.par 1003-3 3 " >>& err0
target -com "taToTile tsPlan.par 1003-4 4 " >>& err0
target -com "taToTile tsPlan.par 1003-5 5 " >>& err0
target -com "taToTile tsPlan.par 1003-6 6 " >>& err0
target -com "taToTile tsPlan.par 1003-7 7 " >>& err0
target -com "taToTile tsPlan.par 1003-8 8 " >>& err0
target -com "taToTile tsPlan.par 1003-9 9 " >>& err0
target -com "taToTile tsPlan.par 1003-10 10 " >>& err0
target -com "taToTile tsPlan.par 1003-11 11 " >>& err0

#merges all tiInputTargets file from each of 12 cols into 1 big file

target -com "tileCat [glob tiInputTargets-1003-*] 1003" >>& err0

#run tiling (on the equator for nice linear tile lineup is done with tileEq)
setup tiling
tiling -com "tileEq tiPlan.par" >>& err0

#unify all together all HDUs in tsObjOut files with NON-tilable targets into ct files
cd /data/dp3.b/data/745/target
target -com "compt /data/dp3.b/data/745/calibChunks/tsChunk-10-464500.par 0" >& /dev/null
target -com "compt /data/dp3.b/data/745/calibChunks/tsChunk-10-464500.par 1" >& /dev/null
target -com "compt /data/dp3.b/data/745/calibChunks/tsChunk-10-464500.par 2" >& /dev/null
target -com "compt /data/dp3.b/data/745/calibChunks/tsChunk-10-464500.par 3" >& /dev/null
target -com "compt /data/dp3.b/data/745/calibChunks/tsChunk-10-464500.par 4" >& /dev/null
target -com "compt /data/dp3.b/data/745/calibChunks/tsChunk-10-464500.par 5" >& /dev/null

cd /data/dp3.b/data/752/target
target -com "compt /data/dp3.b/data/752/calibChunks/tsChunk-10-903700.par 0" >& /dev/null
target -com "compt /data/dp3.b/data/752/calibChunks/tsChunk-10-903700.par 1" >& /dev/null
target -com "compt /data/dp3.b/data/752/calibChunks/tsChunk-10-903700.par 2" >& /dev/null
target -com "compt /data/dp3.b/data/752/calibChunks/tsChunk-10-903700.par 3" >& /dev/null
target -com "compt /data/dp3.b/data/752/calibChunks/tsChunk-10-903700.par 4" >& /dev/null
target -com "compt /data/dp3.b/data/752/calibChunks/tsChunk-10-903700.par 5" >& /dev/null

#merge all ct files from each column into one master ctIn.fit file
cd /data/dp3.b/data/745/tile
target -com "joinem 745 /data/dp3.b/data/745/target 752 /data/dp3.b/data/752/target 1 6" >/dev/null

#convert tile centers into data model compliant format
target -com "cvrt tile-1003Out.par tile1003OutC.par"

#set tiling assignments to all targets in completed tile inputs.
#51 is number of tiles 
target -com "matchtiled ctIn.fit tiOutputTargets-1003.fit ctInT.fit 51"

# Assign fibers to plates
target -com "completetile ctInT.fit tile-1003OutC.par" >& tileerr &