compass.ocean.tests.tides.mesh.vr45to5.VRTidesMesh
- class compass.ocean.tests.tides.mesh.vr45to5.VRTidesMesh(test_case, pixel, name='base_mesh', subdir=None, elev_file='RTopo_2_0_4_GEBCO_v2023_30sec_pixel.nc', spac_dhdx=0.1, spac_hmin=10.0, spac_hmax=75.0, spac_hbar=60.0, ncell_nwav=60, ncell_nslp=0, filt_sdev=3.0, filt_halo=50, filt_plev=0.325)[source]
A step for creating a variable resolution tides mesh
- __init__(test_case, pixel, name='base_mesh', subdir=None, elev_file='RTopo_2_0_4_GEBCO_v2023_30sec_pixel.nc', spac_dhdx=0.1, spac_hmin=10.0, spac_hmax=75.0, spac_hbar=60.0, ncell_nwav=60, ncell_nslp=0, filt_sdev=3.0, filt_halo=50, filt_plev=0.325)[source]
Methods
__init__(test_case, pixel[, name, subdir, ...])add_input_file([filename, target, database, ...])Add an input file to the step (but not necessarily to the MPAS model).
add_model_as_input()make a link to the model executable and add it to the inputs
add_namelist_file(package, namelist[, ...])Add a file with updates to namelist options to the step to be parsed when generating a complete namelist file if and when the step gets set up.
add_namelist_options(options[, out_name, mode])Add the namelist replacements to be parsed when generating a namelist file if and when the step gets set up.
add_output_file(filename)Add the output file that must be produced by this step and may be made available as an input to steps, perhaps in other test cases.
add_streams_file(package, streams[, ...])Add a streams file to the step to be parsed when generating a complete streams file if and when the step gets set up.
coarsen_spacing_pixels(hmat, down)constrain_resources(available_resources)Constrain
cpus_per_taskandntasksbased on the number of cores available to this stepelev_sharpness_spacing(ocnh, nslp, hmin, ...)limit_spacing_gradient(spac, dhdx)make_jigsaw_mesh(lon, lat, cell_width)Build the JIGSAW mesh.
process_inputs_and_outputs()Process the inputs to and outputs from a step added with
compass.Step.add_input_file()andcompass.Step.add_output_file().run()Run this step of the test case
runtime_setup()Update attributes of the step at runtime before calling the
run()method.save_and_plot_cell_width(lon, lat, cell_width)Save the cell width field on a lon/lat grid to
self.cell_width_filenameand plotset_resources([cpus_per_task, ...])Update the resources for the subtask.
setup()Add JIGSAW options based on config options
swe_wavelength_spacing(ocnh, nwav, hmin, ...)update_namelist_at_runtime(options[, out_name])Update an existing namelist file with additional options.
update_namelist_pio([out_name])Modify the namelist so the number of PIO tasks and the stride between them consistent with the number of nodes and cores (one PIO task per node).
update_streams_at_runtime(package, streams, ...)Update the streams files during the run phase of this step using the given template and replacements.