╭──────────────────────────────────────────────────────────────────────────────╮
│  Executing geNomad nn-classification (v1.7.1). This will classify the input  │
│  sequences into chromosome, plasmid, or virus based on the nucleotide        │
│  sequence.                                                                   │
│  ──────────────────────────────────────────────────────────────────────────  │
│  Outputs:                                                                    │
│    /expanse/projects/nmdc/edge_app/test/nmdc-edge/io/projects/rNXOkOpGri4Lg  │
│    iMH/output/virus_plasmid/metag_1_contigs_nn_classification                │
│    ├── metag_1_contigs_nn_classification.json (execution parameters)         │
│    ├── metag_1_contigs_encoded_sequences (directory containing encoded       │
│    │   sequence data)                                                        │
│    ├── metag_1_contigs_nn_classification.tsv (contig classification:         │
│    │   tabular format)                                                       │
│    ├── metag_1_contigs_nn_classification.npz (contig classification: binary  │
│    │   format)                                                               │
│    ├── metag_1_contigs_encoded_proviruses (directory containing encoded      │
│    │   sequence data)                                                        │
│    ├── metag_1_contigs_provirus_nn_classification.tsv (provirus              │
│    │   classification: tabular format)                                       │
│    └── metag_1_contigs_provirus_nn_classification.npz (provirus              │
│        classification: binary format)                                        │
╰──────────────────────────────────────────────────────────────────────────────╯
[13:44:14] Executing genomad nn-classification.                                 
[13:44:14] Creating the                                                         
           /expanse/projects/nmdc/edge_app/test/nmdc-edge/io/projects/rNXOkOpGri
           4LgiMH/output/virus_plasmid/metag_1_contigs_nn_classification        
           directory.                                                           
[13:44:14] Creating the                                                         
           /expanse/projects/nmdc/edge_app/test/nmdc-edge/io/projects/rNXOkOpGri
           4LgiMH/output/virus_plasmid/metag_1_contigs_nn_classification/metag_1
           _contigs_encoded_sequences directory.                                
[13:44:18] Encoded sequence data written to metag_1_contigs_encoded_sequences.  
[13:44:18] Creating the                                                         
           /expanse/projects/nmdc/edge_app/test/nmdc-edge/io/projects/rNXOkOpGri
           4LgiMH/output/virus_plasmid/metag_1_contigs_nn_classification/metag_1
           _contigs_encoded_proviruses directory.                               
[13:44:18] Encoded provirus data written to metag_1_contigs_encoded_proviruses. 
[13:45:24] Sequences classified.                                                
[13:45:24] Sequence classification in binary format written to                  
           metag_1_contigs_nn_classification.npz.                               
[13:45:24] Deleting encoded sequence data.                                      
[13:45:24] Sequence classification in tabular format written to                 
           metag_1_contigs_nn_classification.tsv.                               
[13:45:27] Proviruses classified.                                               
[13:45:27] Provirus classification in binary format written to                  
           metag_1_contigs_provirus_nn_classification.npz.                      
[13:45:27] Deleting encoded provirus data.                                      
[13:45:27] Provirus classification in tabular format written to                 
           metag_1_contigs_provirus_nn_classification.tsv.                      
[13:45:27] geNomad nn-classification finished!