Input-seq: fna/UHGV-1269188.fna

Template:  UHGV-1269188 strand: - 40945-41021
Variable:  UHGV-1269188 strand: - 41454-41530 alnlen 76 mutations 12 involve-A 0 involve-T 9

40945      AGCCGTTGTTTCCTCCTCGGGTGTCGTCTGCTTCAATTACTGCAACAATGTCATCGGTGTTCGCCCAGTTTGTATC
           ::::::::::::::::::::::  ::::  :  :::: :::::::::::: :: :::::::::::::   ::::::
41454      AGCCGTTGTTTCCTCCTCGGGTAACGTCAACAACAATAACTGCAACAATGACAACGGTGTTCGCCCAACCTGTATC

Template:  UHGV-1269188 strand: + 41455-41530
Variable:  UHGV-1269188 strand: + 39742-39817 alnlen 75 mutations 15 involve-A 13 involve-T 0

41455      GCCGTTGTTTCCTCCTCGGGTAACGTCAACAACAATAACTGCAACAATGACAACGGTGTTCGCCCAACCTGTATC
           :::::::::::::::::::::  ::::  : :: ::::::::  :: :: :  :::::::::::::   ::::::
39742      GCCGTTGTTTCCTCCTCGGGTGGCGTCTGCTACTATAACTGCTGCAGTGTCTTCGGTGTTCGCCCAGTTTGTATC

Template:  UHGV-1269188 strand: + 41454-41530
Variable:  UHGV-1269188 strand: + 40343-40419 alnlen 76 mutations 14 involve-A 12 involve-T 0

41454      AGCCGTTGTTTCCTCCTCGGGTAACGTCAACAACAATAACTGCAACAATGACAACGGTGTTCGCCCAACCTGTATC
           ::::::::::::::::::::::: ::::: : :: :: :::::: :  :: :  :::::::::::::   ::::::
40343      AGCCGTTGTTTCCTCCTCGGGTAGCGTCAGCGACTATGACTGCATCTGTGGCCTCGGTGTTCGCCCAGTTTGTATC

Template:  UHGV-1269188 strand: + 41454-41530
Variable:  UHGV-1269188 strand: + 40945-41021 alnlen 76 mutations 12 involve-A 10 involve-T 0

41454      AGCCGTTGTTTCCTCCTCGGGTAACGTCAACAACAATAACTGCAACAATGACAACGGTGTTCGCCCAACCTGTATC
           ::::::::::::::::::::::  ::::  :  :::: :::::::::::: :: :::::::::::::   ::::::
40945      AGCCGTTGTTTCCTCCTCGGGTGTCGTCTGCTTCAATTACTGCAACAATGTCATCGGTGTTCGCCCAGTTTGTATC

Total tr-vr pair: 4