species track_path track_name track_color track_height autoscale min max athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0290_pseu_negative.bw ont_pseu_X0290_negative rgb(100,233,136) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0290_pseu_positive.bw ont_pseu_X0290_positive rgb(100,233,136) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0290_m6a_negative.bw ont_m6a_X0290_negative rgb(200,100,200) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0290_m6a_positive.bw ont_m6a_X0290_positive rgb(200,100,200) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0289_pseu_negative.bw ont_pseu_X0289_negative rgb(100,233,136) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0289_pseu_positive.bw ont_pseu_X0289_positive rgb(100,233,136) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0289_m6a_negative.bw ont_m6a_X0289_negative rgb(200,100,200) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/X0289_m6a_positive.bw ont_m6a_X0289_positive rgb(200,100,200) 30 FALSE 0.2 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/Ath_PhyloP.bw phylop_conservation_ath rgb(100,33,100) 75 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/alyrata_root_X0239_vs_combIVT_uniq.bw root_X0239vsCombIVT rgb(100,0,100) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/leaf_pseudoU_cfreq_genome2024.bedGraph pseu_leaf_nanorms rgb(50,100,0) 25 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/drna_bgs/seedling_pseudoU_cfreq_genome2024.bedGraph pseu_seedling_nanorms rgb(100,50,0) 25 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/alyrata_root_X0240_vs_combIVT_uniq.bw root_X0240vsCombIVT rgb(100,0,200) 50 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/alyrata_shoot_X0241_vs_combIVT_uniq.bw shoot_X0241vsCombIVT rgb(0,100,0) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/athaliana_leaf_ath_combined_leaf_uniq.bw leaf_combined rgb(0,100,0) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/athaliana_root_ath_combined_root_uniq.bw root_combined rgb(100,0,200) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/athaliana_seedling_ath_combined_seedling_uniq.bw seedling_combined rgb(100,0,0) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/athaliana_shoot_ath_combined_shoot_uniq.bw shoot_combined rgb(0,100,0) 50 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/crubella_root_X0236vsX0286_uniq.bw root_X0236vsX0286 rgb(100,0,200) 50 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/crubella_shoot_X0237vsX0286_uniq.bw shoot_X0237vsX0286 rgb(0,100,0) 50 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/camelina_root_X0234vsX0288_camelina_root_uniq.bw root_X0234vsX0288 rgb(100,0,200) 50 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/bigwigs/camelina_shoot_X0235vsX0288_camelina_shoot_uniq.bw shoot_X0235vsX0288 rgb(0,100,0) 50 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/alyrata/X0239_vs_combIVT_nanocompore_peaks_genome.bed root_X0239_vs_combIVT rgb(100,0,100) 25 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/alyrata/X0241_vs_combIVT_nanocompore_peaks_genome.bed shoot_X0241_vs_combIVT rgb(0,100,0) 25 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/alyrata/X0240_vs_combIVT_nanocompore_peaks_genome.bed root_X0240_vs_combIVT rgb(100,0,100) 25 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/camelina/X0234vsX0288_camelina_root_nanocompore_peaks_genome.bed root_X0234vsX0288_camelina_root rgb(100,0,100) 25 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/camelina/X0235vsX0288_camelina_shoot_nanocompore_peaks_genome.bed shoot_X0235vsX0288_camelina_shoot rgb(0,100,0) 25 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/crubella/X0236vsX0286_nanocompore_peaks_genome.bed root_X0236vsX0286 rgb(100,0,100) 25 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/crubella/X0237vsX0286_nanocompore_peaks_genome.bed shoot_X0237vsX0286 rgb(0,100,0) 25 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/athaliana/ath_combined_seedling_nanocompore_peaks_genome.bed seedling_ath_combined_seedling rgb(100,0,0) 25 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/athaliana/ath_combined_root_nanocompore_peaks_genome.bed root_ath_combined_root rgb(100,0,100) 25 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/athaliana/ath_combined_shoot_nanocompore_peaks_genome.bed shoot_ath_combined_shoot rgb(0,100,0) 25 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/athaliana/ath_combined_leaf_nanocompore_peaks_genome.bed leaf_ath_combined_leaf rgb(0,100,0) 25 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/peaks/athaliana/leaf_arabidopsis_miCLIP_sites.bed public_miCLIP_sites rgb(100,100,0) 25 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/alyrata/X0241_lyrata_shootNative_32thread_sampled_genome.bam shoot_bam_sampled_X0241 rgb(0,100,0) 50 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/alyrata/X0239_alyrata_rootNative_sampled_genome.bam root_bam_sampled_X0239 rgb(100,0,100) 50 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/alyrata/X0240_lyrata_rootNative_v3_sampled_genome.bam root_bam_sampled_X0240 rgb(100,50,100) 50 TRUE 1 1 alyrata /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/alyrata/alyrata_ivt_combinedX074_X0284_sampled_genome.bam ivt_combined_bam_sampled rgb(100,100,100) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/arabidopsis_seedling_reanalysis_oct17_sampled_genome.bam seedling_bam_sampled_combined rgb(100,0,0) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/leaf_sampled_genome.bam leaf_bam_sampled_combined rgb(0,100,0) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/arabidopsis_root_sample_dec2_sampled_genome.bam root_bam_sampled_combined rgb(100,50,100) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/arabidopsis_ivt_sample_dec8_sampled_genome.bam ivt_bam_sampled_combined rgb(100,100,100) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/arabidopsis_shoot_sample_dec2_sampled_genome.bam shoot_bam_sampled_combined rgb(0,100,0) 50 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/camelina/X0288_camelina_IVT_sampled_genome.bam ivt_bam_sampled_X0288 rgb(100,100,100) 50 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/camelina/X0235_camelina_shoot_sampled_genome.bam shoot_bam_sampled_X0235 rgb(0,100,0) 50 TRUE 1 1 camelina /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/camelina/X0234_camelina_root_sampled_genome.bam root_bam_sampled_X0234 rgb(100,50,100) 50 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/crubella/X0286_crubella_rootIVT_sampled_genome.bam ivt_bam_sampled_X0286 rgb(100,100,100) 50 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/crubella/X0237_crubella_shootNative_sampled_genome.bam shoot_bam_sampled_X0237 rgb(0,100,0) 50 TRUE 1 1 crubella /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/crubella/X0236_crubella_rootNative_sampled_genome.bam root_bam_sampled_X0236 rgb(100,50,100) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/X0289_sup_m6A_pseU-calls.bam X0289_alignments rgb(65,33,100) 50 TRUE 1 1 athaliana /global/cfs/cdirs/m342/www/jgi_usa/drna_tracks/alignments/athaliana/X0290_sup_m6A_pseU-calls.bam X0290_alignments rgb(100,33,36) 50 TRUE 1 1