Index of /cfs/m342/jgi_usa/rnamod_meme

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• 2022/
• april_custom/
• meme.html
• meme_out_12FLANK_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_-1_pad5/
• meme_out_12FLANK_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_0_pad5/
• meme_out_12FLANK_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_1_pad5/
• meme_out_12FLANK_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_2_pad5/
• meme_out_12FLANK_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_3_pad5/
• meme_out_12FLANK_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_4_pad5/
• meme_out_3rep_gmm_logit_1e-3_cluster-1_pad5/
• meme_out_3rep_gmm_logit_1e-3_cluster0_pad5/
• meme_out_3rep_gmm_logit_1e-3_cluster1_pad5/
• meme_out_3rep_gmm_logit_1e-3_cluster2_pad5/
• meme_out_3rep_gmm_logit_1e-3_cluster3_pad5/
• meme_out_AT1G01060_meme_results_pad25/
• meme_out_AT1G19000_meme_results_pad25/
• meme_out_AT1G22810_meme_results_pad25/
• meme_out_AT1G27730_meme_results_pad25/
• meme_out_AT1G34180_meme_results_pad25/
• meme_out_AT1G74650_meme_results_pad25/
• meme_out_AT1G75240_meme_results_pad25/
• meme_out_AT2G18060_meme_results_pad25/
• meme_out_AT2G31230_meme_results_pad25/
• meme_out_AT2G43000_meme_results_pad25/
• meme_out_AT3G10113_meme_results_pad25/
• meme_out_AT3G12250_meme_results_pad25/
• meme_out_AT3G22830_meme_results_pad25/
• meme_out_AT3G56850_meme_results_pad25/
• meme_out_AT4G01280_meme_results_pad25/
• meme_out_AT4G17980_meme_results_pad25/
• meme_out_AT4G31800_meme_results_pad25/
• meme_out_AT4G32730_meme_results_pad25/
• meme_out_AT4G36160_meme_results_pad25/
• meme_out_AT4G37260_meme_results_pad25/
• meme_out_AT5G05550_meme_results_pad25/
• meme_out_AT5G06100_meme_results_pad25/
• meme_out_AT5G08330_meme_results_pad25/
• meme_out_AT5G13180_meme_results_pad25/
• meme_out_AT5G17300_meme_results_pad25/
• meme_out_AT5G23930_meme_results_pad25/
• meme_out_AT5G46830_meme_results_pad25/
• meme_out_AT5G52660_meme_results_pad25/
• meme_out_AT5G58850_meme_results_pad25/
• meme_out_AT5G65310_meme_results_pad25/
• meme_out_AT5G65410_meme_results_pad25/
• meme_out_AT5G66700_meme_results_pad25/
• meme_out_AT5G67580_meme_results_pad25/
• meme_out_GMM_logit_pvalue_context_3_leaf_pad20_top500_pad20/
• meme_out_GMM_logit_pvalue_context_3_pad10_top1000_pad10/
• meme_out_GMM_logit_pvalue_context_3_pad10_top500_pad10/
• meme_out_GMM_logit_pvalue_context_3_pad20_top1000_pad20/
• meme_out_GMM_logit_pvalue_context_3_pad20_top500_pad20/
• meme_out_GMM_logit_pvalue_context_3_seed_pad20_top500_pad20/
• meme_out_GMM_logit_pvalue_leaf_pad20_top500_pad20/
• meme_out_GMM_logit_pvalue_pad10_top1000_pad10/
• meme_out_GMM_logit_pvalue_pad10_top500_pad10/
• meme_out_GMM_logit_pvalue_pad20_top1000_pad20/
• meme_out_GMM_logit_pvalue_pad20_top500_pad20/
• meme_out_GMM_logit_pvalue_seed_pad20_top500_pad20/
• meme_out_KS_dwell_pvalue_context_3_leaf_pad20_top500_pad20/
• meme_out_KS_dwell_pvalue_context_3_pad10_top1000_pad10/
• meme_out_KS_dwell_pvalue_context_3_pad10_top500_pad10/
• meme_out_KS_dwell_pvalue_context_3_pad20_top1000_pad20/
• meme_out_KS_dwell_pvalue_context_3_pad20_top500_pad20/
• meme_out_KS_dwell_pvalue_context_3_seed_pad20_top500_pad20/
• meme_out_KS_dwell_pvalue_leaf_pad20_top500_pad20/
• meme_out_KS_dwell_pvalue_pad10_top1000_pad10/
• meme_out_KS_dwell_pvalue_pad10_top500_pad10/
• meme_out_KS_dwell_pvalue_pad20_top1000_pad20/
• meme_out_KS_dwell_pvalue_pad20_top500_pad20/
• meme_out_KS_dwell_pvalue_seed_pad20_top500_pad20/
• meme_out_KS_intensity_pvalue_context_3_leaf_pad20_top500_pad20/
• meme_out_KS_intensity_pvalue_context_3_pad10_top1000_pad10/
• meme_out_KS_intensity_pvalue_context_3_pad10_top500_pad10/
• meme_out_KS_intensity_pvalue_context_3_pad20_top1000_pad20/
• meme_out_KS_intensity_pvalue_context_3_pad20_top500_pad20/
• meme_out_KS_intensity_pvalue_context_3_seed_pad20_top500_pad20/
• meme_out_KS_intensity_pvalue_leaf_pad20_top500_pad20/
• meme_out_KS_intensity_pvalue_pad10_top1000_pad10/
• meme_out_KS_intensity_pvalue_pad10_top500_pad10/
• meme_out_KS_intensity_pvalue_pad20_top1000_pad20/
• meme_out_KS_intensity_pvalue_pad20_top500_pad20/
• meme_out_KS_intensity_pvalue_seed_pad20_top500_pad20/
• meme_out_LeafIVT_rerun1e3lor_pad5_width10/
• meme_out_LeafIVT_rerun1e3lor_pad8_width12/
• meme_out_LeafIVT_rerun1e7lor_pad5_width10/
• meme_out_LeafIVT_rerun1e7lor_pad8_width12/
• meme_out_MLUSI_X0214X0218_GMM001_nocluster_pad7w15_pad7/
• meme_out_MLUSI_X0214_byRegion_CDS_pad5w10_pad5/
• meme_out_MLUSI_X0214_byRegion_CDS_pad7w15_pad7/
• meme_out_MLUSI_X0214_byRegion_five_prime_UTR_pad5w10_pad5/
• meme_out_MLUSI_X0214_byRegion_five_prime_UTR_pad7w15_pad7/
• meme_out_MLUSI_X0214_byRegion_three_prime_UTR_pad5w10_pad5/
• meme_out_MLUSI_X0214_byRegion_three_prime_UTR_pad7w15_pad7/
• meme_out_MLUSI_X0218vX0214_pad10_W20_ignoreClusters_pad10/
• meme_out_MLUSI_X0218vX0214_pad15_W20_ignoreClusters_pad15/
• meme_out_MLUSI_X0218vX0214_pad5_W10_Recluster_NOV2_clust0_pad5/
• meme_out_MLUSI_X0218vX0214_pad5_W10_Recluster_NOV2_clust0_pad7/
• meme_out_MLUSI_X0218vX0214_pad5_W10_Recluster_NOV2_clust1_pad5/
• meme_out_MLUSI_X0218vX0214_pad5_W10_Recluster_NOV2_clust1_pad7/
• meme_out_MLUSI_X0218vX0214_pad5_W10_Recluster_NOV_clust0_pad5/
• meme_out_MLUSI_X0218vX0214_pad5_W10_Recluster_NOV_clust1_pad5/
• meme_out_MLUSI_X0218vX0214_pad5_W10_ignoreClusters_pad5/
• meme_out_MLUSI_X0218vX0214_pad8_W15_ignoreClusters_pad8/
• meme_out_MLUSI_X0218vX0219_DWELL_pad7_w10_ignoreClusters_pad7/
• meme_out_MLUSI_X0218vX0219_INTENSE_1e5_pad5_w10_ignoreClusters_pad5/
• meme_out_MLUSI_X0218vX0219_INTENSE_1e7_pad5_w10_ignoreClusters_pad5/
• meme_out_MLUSI_X0218vX0219_INTENSE_1e7_pad7_w12_ignoreClusters_pad7/
• meme_out_MLUSI_X0218vX0219_INTENSE_lt1e3_gt1e4_pad5_w10_ignoreClusters_pad5/
• meme_out_MLUSI_X0218vX0219_INTENSE_lt1e4_gt1e5_pad5_w10_ignoreClusters_pad5/
• meme_out_MLUSI_X0218vX0219_gmm_1e1_pad7_w12_ignoreClusters_pad7/
• meme_out_MLUSI_X0218vX0219_gmm_1e3_pad7_w12_ignoreClusters_pad7/
• meme_out_MLUSI_X0219X0218_GMM0001_nocluster_pad7w15_pad7/
• meme_out_MLUSI_X0219X0218_GMM001_nocluster_pad7w15_pad7/
• meme_out_MLUSI_X0219X0218_KS00001_nocluster_pad10w15_pad10/
• meme_out_MLUSI_X0219X0218_KS0001_nocluster_pad7w15_pad7/
• meme_out_MLUSI_X0219X0218_KS001_nocluster_pad10w15_pad10/
• meme_out_MLUSI_X0219X0218_KS1e5_nocluster_pad10w15_pad10/
• meme_out_MLUSI_X0219X0218_KS1e5_nocluster_pad5w15_pad5/
• meme_out_MLUSI_X0219X0218_KS1e5_nocluster_pad5w15_pad7/
• meme_out_MLUSI_X0219X0218_KS1e5_nocluster_pad7w20_pad7/
• meme_out_MLUSI_X0219_byRegion_CDS_pad7w15_pad7/
• meme_out_MLUSI_X0219_byRegion_five_prime_UTR_pad7w15_pad7/
• meme_out_MLUSI_X0219_byRegion_three_prime_UTR_pad7w15_pad7/
• meme_out_MLUSI_resample_X0218vX0214_pad10_W20_Recluster_NOV3_clust-1_pad10/
• meme_out_MLUSI_resample_X0218vX0214_pad10_W20_Recluster_NOV3_clust0_pad10/
• meme_out_MLUSI_resample_X0218vX0214_pad10_W20_Recluster_NOV3_clust1_pad10/
• meme_out_MLUSI_resample_X0218vX0214_pad5_W10_Recluster_NOV3_clust-1_pad5/
• meme_out_MLUSI_resample_X0218vX0214_pad5_W10_Recluster_NOV3_clust0_pad5/
• meme_out_MLUSI_resample_X0218vX0214_pad5_W10_Recluster_NOV3_clust1_pad5/
• meme_out_MLUSI_resample_X0218vX0214_pad7_W16_Recluster_NOV3_clust1_pad7/
• meme_out_MLUSI_resample_X0218vX0219_Oct20_clustering_pad5_W10_Recluster-1_pad5/
• meme_out_MLUSI_resample_X0218vX0219_Oct20_clustering_pad5_W10_Recluster0_pad5/
• meme_out_MLUSI_resample_X0218vX0219_Oct20_clustering_pad5_W10_Recluster1_pad5/
• meme_out_MLUSI_resample_X0218vX0219_pad5_W10_Recluster_NOV_clust_0001-1_pad5/
• meme_out_MLUSI_resample_X0218vX0219_pad5_W10_Recluster_NOV_clust_00010_pad5/
• meme_out_MLUSI_resample_X0218vX0219_pad5_W10_Recluster_NOV_clust_00011_pad5/
• meme_out_MLUSI_resample_X0218vX0219_pad7_W12_Recluster_NOV_clust-1_pad7/
• meme_out_MLUSI_resample_X0218vX0219_pad7_W12_Recluster_NOV_clust0_pad7/
• meme_out_MLUSI_resample_X0218vX0219_pad7_W12_Recluster_NOV_clust1_pad7/
• meme_out_SeedIVT_rerun1e3lor_pad5_width10/
• meme_out_SeedIVT_rerun1e3lor_pad8_width12/
• meme_out_SeedIVT_rerun1e7lor_pad5_width10/
• meme_out_SeedIVT_rerun1e7lor_pad8_width12/
• meme_out_X0190_ctrlX0203_pseu_refpos_pad10/
• meme_out_X0191_ctrlX0203_pseu_refpos_pad10/
• meme_out_X0192_ctrlX0203_pseu_refpos_pad10/
• meme_out_X0193_ctrlX0203_pseu_refpos_pad10/
• meme_out_X0214_gmm001_Only_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_Only_multIntersect_top15_pad3_width5/
• meme_out_X0214_gmm001_Only_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_Only_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_Only_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_Only_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_X0223gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_X0219_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_X0219_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_X0219_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0214_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0214_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0214_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0214_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0214_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0214_gmmscore1e3_dec14_pad5_width7/
• meme_out_X0214_gmmscore1e3_dec14_pad7_width10/
• meme_out_X0214_gmmscore1e5_dec14_pad5_width7/
• meme_out_X0214_peaks_gmm3_combined_peaks_pad5_width7/
• meme_out_X0214_peaks_gmm3_combined_peaks_pad7_width12/
• meme_out_X0214_peaks_gmm3_combined_peaks_pad8_width15/
• meme_out_X0214_peaks_top1k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0214_peaks_top5k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0214_peaks_top5k_gmmscore_pad7_width10/
• meme_out_X0214_peaks_top5k_gmmscore_pad7_width12/
• meme_out_X0214_vIVT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0214_vIVT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0214_vIVT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0214_vIVT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0214_vIVT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0214_vIVT_autocollapse_bg_markov0_pad5_width12/
• meme_out_X0214_vIVT_autocollapse_bg_markov0_pad6_width12/
• meme_out_X0214_vIVT_autocollapse_bg_markov0_pad7_width12/
• meme_out_X0214_vIVT_autocollapse_bg_markov1_pad7_width14/
• meme_out_X0214_vIVT_bg_markov1_pad5_width10/
• meme_out_X0214_vIVT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0214_vIVT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0214_vIVT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0214_vIVT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0214_vIVT_rerun1e3lor_pad5_width10/
• meme_out_X0214_vIVT_rerun1e3lor_pad8_width12/
• meme_out_X0214_vIVT_rerun1e7lor_pad5_width10/
• meme_out_X0214_vIVT_rerun1e7lor_pad8_width12/
• meme_out_X0214_vWT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0214_vWT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0214_vWT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0214_vWT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0214_vWT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0214vWT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0214vWT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0214vWT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0214vWT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0214vWT_rerun1e3lor_pad5_width10/
• meme_out_X0214vWT_rerun1e3lor_pad8_width12/
• meme_out_X0214vWT_rerun1e7lor_pad5_width10/
• meme_out_X0214vWT_rerun1e7lor_pad8_width12/
• meme_out_X0219_gmm001_Only_multIntersect_top15_pad10_width5/
• meme_out_X0219_gmm001_Only_multIntersect_top15_pad3_width5/
• meme_out_X0219_gmm001_Only_multIntersect_top15_pad5_width5/
• meme_out_X0219_gmm001_Only_multIntersect_top15_pad5_width7/
• meme_out_X0219_gmm001_Only_multIntersect_top15_pad7_width10/
• meme_out_X0219_gmm001_Only_multIntersect_top15_pad7_width7/
• meme_out_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0219_gmm001_XX_X0222gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0219_gmm001_XX_wtX0218_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0219_gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0219_gmmscore1e3_dec14_pad7_width10/
• meme_out_X0219_peaks_gmm3_combined_peaks_pad5_width7/
• meme_out_X0219_peaks_gmm3_combined_peaks_pad7_width12/
• meme_out_X0219_peaks_gmm3_combined_peaks_pad8_width15/
• meme_out_X0219_peaks_top1k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0219_peaks_top5k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0219_peaks_top5k_gmmscore_pad7_width10/
• meme_out_X0219_peaks_top5k_gmmscore_pad7_width12/
• meme_out_X0219_vIVT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0219_vIVT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0219_vIVT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0219_vIVT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0219_vIVT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0219_vIVT_autocollapse_bg_markov0_pad5_width12/
• meme_out_X0219_vIVT_autocollapse_bg_markov0_pad6_width12/
• meme_out_X0219_vIVT_autocollapse_bg_markov0_pad7_width12/
• meme_out_X0219_vIVT_autocollapse_bg_markov1_pad7_width14/
• meme_out_X0219_vIVT_bg_markov1_pad5_width10/
• meme_out_X0219_vIVT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0219_vIVT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0219_vIVT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0219_vIVT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0219_vIVT_rerun1e3lor_pad5_width10/
• meme_out_X0219_vIVT_rerun1e3lor_pad8_width12/
• meme_out_X0219_vIVT_rerun1e7lor_pad5_width10/
• meme_out_X0219_vIVT_rerun1e7lor_pad8_width12/
• meme_out_X0219_vWT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0219_vWT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0219_vWT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0219_vWT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0219_vWT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0219vWT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0219vWT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0219vWT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0219vWT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0219vWT_rerun1e3lor_pad5_width10/
• meme_out_X0219vWT_rerun1e3lor_pad8_width12/
• meme_out_X0219vWT_rerun1e7lor_pad5_width10/
• meme_out_X0219vWT_rerun1e7lor_pad8_width12/
• meme_out_X0222_gmmscore1e3_dec14_pad7_width10/
• meme_out_X0222_peaks_gmm3_combined_peaks_pad5_width7/
• meme_out_X0222_peaks_gmm3_combined_peaks_pad7_width12/
• meme_out_X0222_peaks_gmm3_combined_peaks_pad8_width15/
• meme_out_X0222_peaks_top1k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0222_peaks_top5k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0222_peaks_top5k_gmmscore_pad7_width10/
• meme_out_X0222_peaks_top5k_gmmscore_pad7_width12/
• meme_out_X0222_vIVT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0222_vIVT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0222_vIVT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0222_vIVT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0222_vIVT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0222_vWT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0222_vWT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0222_vWT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0222_vWT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0222_vWT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0222_v_X0218_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_X0222_v_X0218_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_X0222_v_X0218_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_X0222_v_X0218_all_mods_pad10_w20_GMMtop10k_pad10/
• meme_out_X0222_v_X0218_all_mods_pad10_w20_kstop10k_pad10/
• meme_out_X0222_v_X0218_all_mods_pad5_w10_GMMtop10k_pad5/
• meme_out_X0222_v_X0218_all_mods_pad5_w10_kstop10k_pad5/
• meme_out_X0222_v_X0218_all_mods_pad7_w14_GMMtop10k_pad5/
• meme_out_X0222_v_X0218_all_mods_pad7_w14_GMMtop10k_pad7/
• meme_out_X0222_v_X0218_all_mods_pad7_w14_kstop10k_pad5/
• meme_out_X0222_v_X0218_all_mods_pad7_w14_kstop10k_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_CDS_pad7w15_gmm1e3_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_CDS_pad7w15_ks1e3_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_CDS_pad7w15_ks1e5_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_five_prime_UTR_pad7w15_gmm1e3_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_five_prime_UTR_pad7w15_ks1e3_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_five_prime_UTR_pad7w15_ks1e5_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_three_prime_UTR_pad7w15_gmm1e3_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_three_prime_UTR_pad7w15_ks1e3_pad7/
• meme_out_X0222_v_X0218_rnamtMutant_three_prime_UTR_pad7w15_ks1e5_pad7/
• meme_out_X0222gmm001_Only_multIntersect_top15_pad3_width5/
• meme_out_X0222gmm001_Only_multIntersect_top15_pad5_width7/
• meme_out_X0222gmm001_Only_multIntersect_top15_pad7_width10/
• meme_out_X0222gmm001_XX_X0223gmm001_multIntersect_top15_pad10_width5/
• meme_out_X0222gmm001_XX_X0223gmm001_multIntersect_top15_pad3_width5/
• meme_out_X0222gmm001_XX_X0223gmm001_multIntersect_top15_pad5_width5/
• meme_out_X0222gmm001_XX_X0223gmm001_multIntersect_top15_pad5_width7/
• meme_out_X0222gmm001_XX_X0223gmm001_multIntersect_top15_pad7_width10/
• meme_out_X0222gmm001_XX_X0223gmm001_multIntersect_top15_pad7_width7/
• meme_out_X0222vIVT_autocollapse_bg_markov0_pad5_width12/
• meme_out_X0222vIVT_autocollapse_bg_markov0_pad6_width12/
• meme_out_X0222vIVT_autocollapse_bg_markov0_pad7_width12/
• meme_out_X0222vIVT_autocollapse_bg_markov1_pad7_width14/
• meme_out_X0222vIVT_bg_markov1_pad5_width10/
• meme_out_X0222vIVT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0222vIVT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0222vIVT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0222vIVT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0222vIVT_rerun1e3lor_pad5_width10/
• meme_out_X0222vIVT_rerun1e3lor_pad8_width12/
• meme_out_X0222vIVT_rerun1e7lor_pad5_width10/
• meme_out_X0222vIVT_rerun1e7lor_pad8_width12/
• meme_out_X0222vWT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0222vWT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0222vWT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0222vWT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0222vWT_rerun1e3lor_pad5_width10/
• meme_out_X0222vWT_rerun1e3lor_pad8_width12/
• meme_out_X0222vWT_rerun1e7lor_pad5_width10/
• meme_out_X0222vWT_rerun1e7lor_pad8_width12/
• meme_out_X0223_gmmscore1e3_dec14_pad7_width10/
• meme_out_X0223_peaks_gmm3_combined_peaks_pad12_width15/
• meme_out_X0223_peaks_gmm3_combined_peaks_pad5_width7/
• meme_out_X0223_peaks_gmm3_combined_peaks_pad7_width12/
• meme_out_X0223_peaks_gmm3_combined_peaks_pad8_width15/
• meme_out_X0223_peaks_top1k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0223_peaks_top5k_gmmscore_noRRIDS_pad7_width10/
• meme_out_X0223_peaks_top5k_gmmscore_pad7_width10/
• meme_out_X0223_peaks_top5k_gmmscore_pad7_width12/
• meme_out_X0223_vIVT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0223_vIVT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0223_vIVT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0223_vIVT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0223_vIVT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0223_vWT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0223_vWT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0223_vWT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_X0223_vWT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0223_vWT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_X0223_v_X0218_rnamtMutant_CDS_pad7w15_gmm1e3_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_CDS_pad7w15_ks1e3_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_CDS_pad7w15_ks1e5_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad10_w20_GMMtop10k_pad10/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad10_w20_kstop10k_pad10/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad5_w10_GMMtop10k_pad5/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad5_w10_kstop10k_pad5/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad7_w14_GMMtop10k_pad5/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad7_w14_GMMtop10k_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad7_w14_kstop10k_pad5/
• meme_out_X0223_v_X0218_rnamtMutant_all_mods_pad7_w14_kstop10k_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_five_prime_UTR_pad7w15_gmm1e3_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_five_prime_UTR_pad7w15_ks1e3_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_five_prime_UTR_pad7w15_ks1e5_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_three_prime_UTR_pad7w15_gmm1e3_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_three_prime_UTR_pad7w15_ks1e3_pad7/
• meme_out_X0223_v_X0218_rnamtMutant_three_prime_UTR_pad7w15_ks1e5_pad7/
• meme_out_X0223gmm001_Only_multIntersect_top15_pad10_width5/
• meme_out_X0223gmm001_Only_multIntersect_top15_pad3_width5/
• meme_out_X0223gmm001_Only_multIntersect_top15_pad5_width5/
• meme_out_X0223gmm001_Only_multIntersect_top15_pad5_width7/
• meme_out_X0223gmm001_Only_multIntersect_top15_pad7_width10/
• meme_out_X0223gmm001_Only_multIntersect_top15_pad7_width7/
• meme_out_X0223vIVT_autocollapse_bg_markov0_pad5_width12/
• meme_out_X0223vIVT_autocollapse_bg_markov0_pad6_width12/
• meme_out_X0223vIVT_autocollapse_bg_markov0_pad7_width12/
• meme_out_X0223vIVT_autocollapse_bg_markov1_pad7_width14/
• meme_out_X0223vIVT_bg_markov1_pad5_width10/
• meme_out_X0223vIVT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0223vIVT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0223vIVT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0223vIVT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0223vIVT_rerun1e3lor_pad5_width10/
• meme_out_X0223vIVT_rerun1e3lor_pad8_width12/
• meme_out_X0223vIVT_rerun1e7lor_pad5_width10/
• meme_out_X0223vIVT_rerun1e7lor_pad8_width12/
• meme_out_X0223vWT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_X0223vWT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_X0223vWT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_X0223vWT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_X0223vWT_rerun1e3lor_pad5_width10/
• meme_out_X0223vWT_rerun1e3lor_pad8_width12/
• meme_out_X0223vWT_rerun1e7lor_pad5_width10/
• meme_out_X0223vWT_rerun1e7lor_pad8_width12/
• meme_out_X0234vsX0288_camelina_root_pad8_width15/
• meme_out_X0235vsX0288_camelina_shoot_pad8_width15/
• meme_out_X0236vsX0286_pad8_width15/
• meme_out_X0237vsX0286_pad8_width15/
• meme_out_X0239_vs_combIVT_pad8_width15/
• meme_out_X0240_vs_combIVT_pad8_width15/
• meme_out_X0241_vs_combIVT_pad8_width15/
• meme_out_X0241vX0285_pad8_width15/
• meme_out_X0274_X0239_pad8_width15/
• meme_out_X0274_X0240_pad8_width15/
• meme_out_X0284vsX0241_pad8_width15/
• meme_out_X0289_m6a_085_25x_pad8_width15/
• meme_out_X0289_pseu_025_25x_pad8_width15/
• meme_out_X0290_m6a_085_25x_pad8_width15/
• meme_out_X0290_pseu_025_25x_pad8_width15/
• meme_out_YANOCOMP_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_0_pad10/
• meme_out_YANOCOMP_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_1_pad10/
• meme_out_YANOCOMP_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_2_pad10/
• meme_out_YANOCOMP_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_3_pad10/
• meme_out_YANOCOMP_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_4_pad10/
• meme_out_YANOCOMP_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss3epoch_4_pad7/
• meme_out_actual_pseudo_ath_2repnanocomp_out_1e3_pad5/
• meme_out_actual_pseudo_ath_2repnanocomp_out_1e3_pad7/
• meme_out_actual_pseudo_ath_2repnanocomp_out_1e5_pad5/
• meme_out_actual_pseudo_ath_2repnanocomp_out_1e5_pad7/
• meme_out_all_Ts_individual_standardscaler_pad25/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad10_pad10/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad15_pad15/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad25/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad30_pad30/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad40_pad40/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad50_pad50/
• meme_out_all_bottom_left_corner_individual_standardscaler_pad5_pad5/
• meme_out_all_nanocomp_itercombined_1e5_pseduoRep_sigDiffZero_collapse_0_pad5/
• meme_out_all_nanocomp_itercombined_1e5_pseduoRep_sigDiffZero_collapse_cluster-1_pad5/
• meme_out_all_nanocomp_itercombined_1e5_pseduoRep_sigDiffZero_collapse_cluster0_pad5/
• meme_out_all_nanocomp_itercombined_1e5_pseduoRep_sigDiffZero_collapse_cluster1_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster-1_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster0_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster1_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster2_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster3_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster4_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster5_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster6_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster7_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster8_pad5/
• meme_out_all_nanocomp_itercombined_1e7_cluster9_pad5/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad12_width25/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad12_width30/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad6_width6/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad7_width12/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad8_width15/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad8_width25/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad8_width9/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad9_width20/
• meme_out_alyrata_X0241vX0285_GPTpeaks_pad9_width6/
• meme_out_alyrata_X0284vsX0241_GPTpeaks_t2_pad8_width15/
• meme_out_alyrata_X0284vsX0241_GPTpeaks_t3_pad8_width15/
• meme_out_april27_wNanoRMS_0_pad10/
• meme_out_april27_wNanoRMS_1_pad10/
• meme_out_april27_wNanoRMS_2_pad10/
• meme_out_april28_collapsed_leafsig_scaledNanormsANDsignalDwell_merged_flank5_minsize150_0_pad10/
• meme_out_april28_collapsed_leafsig_scaledNanormsANDsignalDwell_merged_flank5_minsize150_1_pad10/
• meme_out_april28_collapsed_leafsig_scaledNanormsANDsignalDwell_merged_flank5_minsize150_2_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_0_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_10flank_defaultSimpleCluster_0_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_10flank_defaultSimpleCluster_1_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_10flank_defaultSimpleCluster_2_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_1_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_2_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_3_pad10/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_0_pad5/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_1_pad5/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_2_pad5/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_3_pad5/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_defaultSimpleCluster_0_pad5/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_defaultSimpleCluster_1_pad5/
• meme_out_april28_wNanoRMS_union_signalOnly_5flank_defaultSimpleCluster_2_pad5/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust0_pad5_width10/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust1_pad5_width10/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust2_pad5_width10/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_Strand_2epoch25000_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_Strand_2epoch25001_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_Strand_2epoch25002_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerun0_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerun1_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerun2_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand0_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand1_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand2_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch2500-1_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch2500-1_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25000_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25000_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25001_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25001_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25002_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25002_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25003_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25003_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25004_pad5_width8/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_2epoch25004_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_pctEvent-1_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_pctEvent0_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_pctEvent1_pad7_width12/
• meme_out_arabidopsis_250xSeedling_clust_5900GenomeMotifs_clust_rerunStrand_pctEvent2_pad7_width12/
• meme_out_arabidopsis_GMMPeaksThresh2_peaks_dorado2023333_pad9_width12/
• meme_out_arabidopsis_GMMPeaksThresh2_peaks_dorado2023333_pad9_width15/
• meme_out_arabidopsis_dorado_ks5_peaks_doradoVSguppy_2023_pad7_width12/
• meme_out_arabidopsis_dorado_ks5_peaks_doradoVSguppy_2023_pad9_width15/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy22_2023_pad12_width15/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy22_2023_pad5_width10/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy22_2023_pad7_width15/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy22_2023_pad9_width15/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy_2023_pad12_width15/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy_2023_pad7_width12/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppy_2023_pad9_width15/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppyx22_2023_pad5_width13/
• meme_out_arabidopsis_dorado_only_peaks_doradoVSguppyx22_2023_pad7_width9/
• meme_out_arabidopsis_gmmPeaksThresh2_peaks_dorado2023_pad12_width15/
• meme_out_arabidopsis_gmmPeaksThresh2_peaks_dorado2023_pad9_width12/
• meme_out_arabidopsis_gmmPeaksThresh2_peaks_dorado2023_pad9_width15/
• meme_out_arabidopsis_guppy_gmm2_peaks_doradoVSguppy_2023_pad7_width12/
• meme_out_arabidopsis_guppy_gmm2_peaks_doradoVSguppy_2023_pad7_width8/
• meme_out_arabidopsis_guppy_gmm2_peaks_doradoVSguppy_2023_pad9_width10/
• meme_out_arabidopsis_guppy_gmm2_peaks_doradoVSguppy_2023_pad9_width15/
• meme_out_arabidopsis_guppy_ks5_peaks_doradoVSguppy_2023_pad10_width8/
• meme_out_arabidopsis_guppy_ks5_peaks_doradoVSguppy_2023_pad15_width10/
• meme_out_arabidopsis_guppy_ks5_peaks_doradoVSguppy_2023_pad7_width12/
• meme_out_arabidopsis_guppy_ks5_peaks_doradoVSguppy_2023_pad7_width8/
• meme_out_arabidopsis_guppy_ks5_peaks_doradoVSguppy_2023_pad9_width10/
• meme_out_arabidopsis_guppy_ks5_peaks_doradoVSguppy_2023_pad9_width15/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy22_2023_pad12_width15/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy22_2023_pad5_width10/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy22_2023_pad7_width15/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy22_2023_pad9_width15/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy_2023_pad12_width15/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy_2023_pad7_width12/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppy_2023_pad9_width15/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppyx22_2023_pad5_width13/
• meme_out_arabidopsis_guppy_only_peaks_doradoVSguppyx22_2023_pad7_width9/
• meme_out_arabidopsis_ksPeaksThresh5_peaks_dorado2023_pad12_width15/
• meme_out_arabidopsis_ksPeaksThresh5_peaks_dorado2023_pad9_width12/
• meme_out_arabidopsis_ksPeaksThresh5_peaks_dorado2023_pad9_width15/
• meme_out_arabidopsis_leaf_peaks_april10_2023_pad10_width8/
• meme_out_arabidopsis_leaf_peaks_april10_2023_pad8_width12/
• meme_out_arabidopsis_leaf_pseudo_march3023_pad6_width10/
• meme_out_arabidopsis_leaf_pseudo_march3023_pad8_width12/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy22_2023_pad12_width15/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy22_2023_pad5_width10/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy22_2023_pad7_width15/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy22_2023_pad9_width15/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy_2023_pad12_width15/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy_2023_pad7_width12/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppy_2023_pad9_width15/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppyx22_2023_pad5_width13/
• meme_out_arabidopsis_peak_both_peaks_doradoVSguppyx22_2023_pad7_width9/
• meme_out_arabidopsis_root_GMM5orKS5_pad8_width15/
• meme_out_arabidopsis_root_peaks_april10_2023_pad10_width8/
• meme_out_arabidopsis_root_peaks_april10_2023_pad8_width12/
• meme_out_arabidopsis_root_peaks_pad8_width15/
• meme_out_arabidopsis_seedling_peaks_april10_2023_pad10_width8/
• meme_out_arabidopsis_seedling_peaks_april10_2023_pad8_width12/
• meme_out_arabidopsis_seedling_pseudo_march3023_pad6_width10/
• meme_out_arabidopsis_seedling_pseudo_march3023_pad8_width12/
• meme_out_arabidopsis_seeedling_GMM5orKS5_pad8_width15/
• meme_out_arabidopsis_seeedling_peaks_pad8_width15/
• meme_out_arabidopsis_shoot_peaks_april10_2023_pad10_width8/
• meme_out_arabidopsis_shoot_peaks_april10_2023_pad8_width12/
• meme_out_ath_combined_leaf_pad8_width15/
• meme_out_ath_combined_root_pad8_width15/
• meme_out_ath_combined_seedling_pad8_width15/
• meme_out_ath_combined_shoot_pad8_width15/
• meme_out_ath_nanorms_n_pad5_n6201_pad5/
• meme_out_ath_nanorms_n_pad7_n6201_pad7/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_cluster0_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_cluster1_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_cluster2_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_cluster3_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_cluster4_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad10w20_cluster3_pad10/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad5w10_cluster0_pad5/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad5w10_cluster1_pad5/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad5w10_cluster2_pad5/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad5w10_cluster3_pad5/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad5w10_cluster4_pad5/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad6w12_cluster0_pad6/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad6w12_cluster1_pad6/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad6w12_cluster2_pad6/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad6w12_cluster3_pad6/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad6w12_cluster4_pad6/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad8w16_cluster0_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad8w16_cluster1_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad8w16_cluster2_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad8w16_cluster3_pad8/
• meme_out_ath_rerun_ks1e6_gmm1e3_oct18_aelGCL_2poch_56ksites_pad8w16_cluster4_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD80_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD81_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD82_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw100_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw101_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw102_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw103_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw104_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw105_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw106_pad8/
• meme_out_ath_rerun_ksGMM_1e10_oct17_aelGCL_bc2500_cluster_PAD8_maxw107_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster0_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster1_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster2_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster3_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster4_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster_1MOTIF_max100_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster_1MOTIF_max101_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster_1MOTIF_max102_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster_1MOTIF_max103_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_2epock_cluster_1MOTIF_max104_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_UTR_in_three_prime_UTR_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster0_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster1_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster2_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster3_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster4_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster5_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster6_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_cluster_2epock0_pad8/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_pad15_UTR_NOT_in_three_prime_UTR_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_pad15_UTR_in_three_prime_UTR_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_pad7_UTR_NOT_in_three_prime_UTR_pad7/
• meme_out_ath_rerun_ksGMM_1e5_oct13_aelGCL_bc2500_pad7_UTR_in_three_prime_UTR_pad7/
• meme_out_ath_rerun_ksGMM_1e5_oct13_ael_bc500_cluster0_pad15/
• meme_out_ath_rerun_ksGMM_1e5_oct13_ael_bc500_pad15/
• meme_out_big_clusters_sigDiff_cluster-1_pad5/
• meme_out_big_clusters_sigDiff_cluster-1_pad7_width10_pad7/
• meme_out_big_clusters_sigDiff_cluster0_pad5/
• meme_out_big_clusters_sigDiff_cluster0_pad7_width10_pad7/
• meme_out_big_clusters_sigDiff_cluster1_pad5/
• meme_out_big_clusters_sigDiff_cluster1_pad7_width10_pad7/
• meme_out_brassicaBolPbioRef_root_GMM2logit05_pad8_width15/
• meme_out_brassicaBolPbioRef_root_GMM3logit05_pad10_width15/
• meme_out_brassicaBolPbioRef_root_GMM3logit05_pad8_width15/
• meme_out_brassicaBolPbioRef_seedling_GMM3ks3_logit05_pad8_width15/
• meme_out_brassicaBolPbioRef_seedling_GMM3ks5_logit05_pad8_width15/
• meme_out_brassicaBolPbioRef_seedling_GMM3logit045_pad7_width10/
• meme_out_brassicaBolPbioRef_seedling_GMM3logit05_pad8_width15/
• meme_out_brassicaRapa_rootAug30_GMM2orKS3_pad7_width10/
• meme_out_brassicaRapa_rootAug30_GMM2orKS3_pad8_width15/
• meme_out_brassicaRapa_rootAug30_GMM3orKS5_pad7_width10/
• meme_out_brassicaRapa_root_GMM3orKS5_pad7_width10/
• meme_out_brassicaRapa_seedling_GMM3orKS5_pad7_width10/
• meme_out_brassicaRapa_seedling_GMM3orKS5_pad8_width15/
• meme_out_brassica_bolEnsembl_root_GMM2orKS2_pad10_width15/
• meme_out_brassica_bolEnsembl_root_GMM2orKS2_pad6_width10/
• meme_out_brassica_bolEnsembl_root_GMM2orKS2_pad8_width15/
• meme_out_brassica_bolEnsembl_root_GMM3orKS3_pad10_width15/
• meme_out_brassica_bolEnsembl_root_GMM3orKS3_pad6_width10/
• meme_out_brassica_bolEnsembl_root_GMM3orKS3_pad8_width15/
• meme_out_brassica_bolEnsembl_root_GMM3orKS5_pad10_width15/
• meme_out_brassica_bolEnsembl_root_GMM3orKS5_pad6_width10/
• meme_out_brassica_bolEnsembl_root_GMM3orKS5_pad7_width10/
• meme_out_brassica_bolEnsembl_root_GMM5orKS5_pad10_width15/
• meme_out_brassica_bolEnsembl_root_GMM5orKS5_pad6_width10/
• meme_out_brassica_bolEnsembl_root_GMM5orKS5_pad8_width15/
• meme_out_brassica_bolEnsembl_seedling_GMM5orKS5_pad10_width15/
• meme_out_brassica_bolEnsembl_seedling_GMM5orKS5_pad6_width10/
• meme_out_brassica_bolEnsembl_seedling_GMM5orKS5_pad7_width9/
• meme_out_brassica_bolEnsembl_seedling_GMM5orKS5_pad8_width15/
• meme_out_brassica_bol_root_GMM3orKS3_pad10_width12/
• meme_out_brassica_bol_root_GMM3orKS3_pad8_width15/
• meme_out_brassica_bol_root_gmm2peaks_aug24_pad6_width12/
• meme_out_brassica_bol_root_gmm2peaks_aug24_pad7_width10/
• meme_out_brassica_bol_root_gmm2peaks_aug24_pad7_width12/
• meme_out_brassica_bol_root_gmm2peaks_aug24_pad9_width15/
• meme_out_brassica_bol_root_gmm5peaks_aug24_pad6_width12/
• meme_out_brassica_bol_root_gmm5peaks_aug24_pad7_width10/
• meme_out_brassica_bol_root_gmm5peaks_aug24_pad7_width12/
• meme_out_brassica_bol_root_gmm5peaks_aug24_pad9_width15/
• meme_out_brassica_bol_seeedling_GMM3orKS3_pad10_width12/
• meme_out_brassica_bol_seeedling_GMM3orKS3_pad12_width15/
• meme_out_brassica_bol_seeedling_GMM3orKS3_pad7_width12/
• meme_out_brassica_bol_seeedling_GMM3orKS3_pad8_width15/
• meme_out_brassica_bol_seeedling_GMM5orKS5_pad7_width12/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad10_width12/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad15_width12/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad15_width15/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad6_width12/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad7_width10/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad7_width12/
• meme_out_brassica_bol_seeedling_gmm2peaks_aug24_pad9_width15/
• meme_out_brassica_bol_seeedling_gmm5peaks_aug24_pad6_width12/
• meme_out_brassica_bol_seeedling_gmm5peaks_aug24_pad7_width10/
• meme_out_brassica_bol_seeedling_gmm5peaks_aug24_pad7_width12/
• meme_out_brassica_bol_seeedling_gmm5peaks_aug24_pad9_width15/
• meme_out_brassica_ivtX0287_root_pad8_width15/
• meme_out_brassica_ivtX0287_root_ref2_pad8_width15/
• meme_out_brassica_ivtX0287_seedling_pad8_width15/
• meme_out_brassica_ivtX0287_seedling_ref2_pad8_width15/
• meme_out_brassica_rapa_root_GMM3orKS3_pad7_width12/
• meme_out_brassica_rapa_root_GMM3orKS3_pad8_width15/
• meme_out_brassica_rapa_seeedling_GMM3orKS3_pad8_width12/
• meme_out_brassica_rapa_seeedling_GMM3orKS3_pad8_width15/
• meme_out_brassica_rootNAPUS_peaksGMM1e2_april23_2023_pad10_width10/
• meme_out_brassica_rootNAPUS_peaksGMM1e2_april23_2023_pad7_width10/
• meme_out_brassica_rootNAPUS_peaksGMM1e5_april23_2023_pad10_width10/
• meme_out_brassica_rootNAPUS_peaksGMM1e5_april23_2023_pad7_width10/
• meme_out_brassica_rootNewRef_peaksGMM1e2_april21_2023_pad7_width10/
• meme_out_brassica_rootNewRef_peaksGMM1e5_april21_2023_pad7_width10/
• meme_out_brassica_rootNewRef_peaksGMM1e5_april21_2023_pad9_width10/
• meme_out_brassica_rootNewRef_sitesGMM1e3_april21_2023_pad10_width12/
• meme_out_brassica_rootNewRef_sitesGMM1e3_april21_2023_pad10_width8/
• meme_out_brassica_rootNewRef_sitesGMM1e3_april21_2023_pad7_width10/
• meme_out_brassica_seedlingNAPUS_peaksGMM1e2_april23_2023_pad10_width10/
• meme_out_brassica_seedlingNAPUS_peaksGMM1e2_april23_2023_pad10_width7/
• meme_out_brassica_seedlingNAPUS_peaksGMM1e2_april23_2023_pad7_width10/
• meme_out_brassica_seedlingNAPUS_peaksGMM1e2_april23_2023_pad7_width7/
• meme_out_brassica_seedlingNAPUS_peaksGMM1e5_april23_2023_pad10_width10/
• meme_out_brassica_seedlingNAPUS_peaksGMM1e5_april23_2023_pad7_width10/
• meme_out_brassica_seedlingNewRef_peaksGMM1e2_april21_2023_pad7_width10/
• meme_out_brassica_seedlingNewRef_peaksGMM1e5_april21_2023_pad7_width10/
• meme_out_brassica_seedlingNewRef_peaksGMM1e5_april21_2023_pad9_width10/
• meme_out_brassica_seedlingNewRef_sitesGMM1e3_april21_2023_pad10_width12/
• meme_out_brassica_seedlingNewRef_sitesGMM1e3_april21_2023_pad10_width8/
• meme_out_brassica_seedlingNewRef_sitesGMM1e3_april21_2023_pad7_width10/
• meme_out_collapsed_signalDifference_umapHDBscan_feb28_label0SmallCluster_5pad_pad5/
• meme_out_collapsed_signalDifference_umapHDBscan_feb28_label0SmallCluster_pad10/
• meme_out_collapsed_signalDifference_umapHDBscan_feb28_label1BigCluster_5pad_pad5/
• meme_out_collapsed_signalDifference_umapHDBscan_feb28_label1BigCluster_pad10/
• meme_out_collapsed_signalDifference_umapHDBscan_feb28_label1BigCluster_pad5/
• meme_out_collapsed_signal_nanocompore_umapHDBscan_feb28_pad10/
• meme_out_combo_test_yeast_all_aug13_1e2_gmm_logit_mods_combo_test_yeast_all_aug13_pad10/
• meme_out_combo_test_yeast_all_aug13_1e2_ksdwell_mods_combo_test_yeast_all_aug13_pad10/
• meme_out_combo_test_yeast_all_aug13_1e2_ksintensity_mods_combo_test_yeast_all_aug13_pad10/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_clusters_sigDiff-gmmlogit-all26k_cluster-1_pad5_width8_pad5/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_clusters_sigDiff-gmmlogit-all26k_cluster-1_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_clusters_sigDiff-gmmlogit-all26k_cluster0_pad5_width8_pad5/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_clusters_sigDiff-gmmlogit-all26k_cluster0_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_clusters_sigDiff-gmmlogit-all26k_cluster1_pad5_width8_pad5/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_clusters_sigDiff-gmmlogit-all26k_cluster1_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_gmm_logit_mods_combo_test_yeast_all_aug13_pad10/
• meme_out_combo_test_yeast_all_aug13_1e4_ksdwell_mods_combo_test_yeast_all_aug13_pad10/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_cluster-1_pad6_width10_pad6/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_cluster0_pad6_width10_pad6/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_cluster1_pad6_width10_pad6/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_cluster2_pad6_width10_pad6/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_clusters_sigDiff_cluster-1_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_clusters_sigDiff_cluster0_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_clusters_sigDiff_cluster1_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_clusters_sigDiff-gputest-10k_aelgcl_clusters_sigDiff_cluster2_pad7_width10_pad7/
• meme_out_combo_test_yeast_all_aug13_1e4_ksintensity_mods_combo_test_yeast_all_aug13_pad10/
• meme_out_crubella_X0237vsX0286_GPTpeaks_GMM2thresh_pad6_width15/
• meme_out_crubella_X0237vsX0286_GPTpeaks_GMM2thresh_pad7_width8/
• meme_out_crubella_X0237vsX0286_GPTpeaks_GMM2thresh_pad8_width15/
• meme_out_crubella_X0237vsX0286_GPTpeaks_pad8_width15/
• meme_out_crubella_X0237vsX0286_GPTpeaks_pad9_width25/
• meme_out_crubella_X0237vsX0286_GPTpeaks_pad9_width6/
• meme_out_dwell500intensity500_umap_leaf909_pad20/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_-1_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_0_pad10/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_0_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_1_pad10/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_1_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_2_pad10/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_2_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_3_pad10/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_3_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_4_pad10/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_4_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5_pad10/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5pad_0_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5pad_1_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5pad_2_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5pad_3_pad5/
• meme_out_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5pad_4_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_2windowCollapse_flank5_cluster-1_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_2windowCollapse_flank5_cluster0_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_2windowCollapse_flank5_cluster1_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_2windowCollapse_flank5_cluster2_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_2windowCollapse_flank5_cluster3_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_cluster-1_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_cluster0_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_cluster1_pad5/
• meme_out_gmm_ks10_ks_1e5_60k_nanocompore_cluster2_pad5/
• meme_out_green_hdbscan_pad20/
• meme_out_inWT_andNOT_222_IXNS_gmmscore1e3_jan24_pad5_width10/
• meme_out_inWT_andNOT_222_IXNS_gmmscore1e3_jan24_pad5_width5/
• meme_out_inWT_andNOT_222_IXNS_gmmscore1e3_jan24_pad7_width4/
• meme_out_inWT_andNOT_222_IXNS_gmmscore1e3_jan24_pad7_width7/
• meme_out_inWT_andNOT_222_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWT_andNOT_223_IXNS_gmmscore1e3_jan24_pad5_width10/
• meme_out_inWT_andNOT_223_IXNS_gmmscore1e3_jan24_pad5_width5/
• meme_out_inWT_andNOT_223_IXNS_gmmscore1e3_jan24_pad7_width4/
• meme_out_inWT_andNOT_223_IXNS_gmmscore1e3_jan24_pad7_width7/
• meme_out_inWT_andNOT_223_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWT_and_222_IXNS_gmmscore1e3_jan24_pad5_width10/
• meme_out_inWT_and_222_IXNS_gmmscore1e3_jan24_pad5_width5/
• meme_out_inWT_and_222_IXNS_gmmscore1e3_jan24_pad7_width4/
• meme_out_inWT_and_222_IXNS_gmmscore1e3_jan24_pad7_width7/
• meme_out_inWT_and_222_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWT_and_223_IXNS_gmmscore1e3_jan24_pad5_width10/
• meme_out_inWT_and_223_IXNS_gmmscore1e3_jan24_pad5_width5/
• meme_out_inWT_and_223_IXNS_gmmscore1e3_jan24_pad7_width4/
• meme_out_inWT_and_223_IXNS_gmmscore1e3_jan24_pad7_width7/
• meme_out_inWT_and_223_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWT_not214_autocollapse_bg_markov0_pad5_width12/
• meme_out_inWT_not214_autocollapse_bg_markov0_pad6_width12/
• meme_out_inWT_not214_autocollapse_bg_markov0_pad7_width12/
• meme_out_inWT_not214_autocollapse_bg_markov1_pad7_width12/
• meme_out_inWT_not214_autocollapse_bg_markov1_pad7_width14/
• meme_out_inWT_not214_bg_markov1_pad5_width10/
• meme_out_inWT_not219_autocollapse_bg_markov0_pad5_width12/
• meme_out_inWT_not219_autocollapse_bg_markov0_pad6_width12/
• meme_out_inWT_not219_autocollapse_bg_markov0_pad7_width12/
• meme_out_inWT_not219_autocollapse_bg_markov1_pad7_width12/
• meme_out_inWT_not219_autocollapse_bg_markov1_pad7_width14/
• meme_out_inWT_not219_bg_markov1_pad5_width10/
• meme_out_inWT_not222_autocollapse_bg_markov0_pad5_width12/
• meme_out_inWT_not222_autocollapse_bg_markov0_pad6_width12/
• meme_out_inWT_not222_autocollapse_bg_markov0_pad7_width12/
• meme_out_inWT_not222_autocollapse_bg_markov1_pad7_width12/
• meme_out_inWT_not222_autocollapse_bg_markov1_pad7_width14/
• meme_out_inWT_not222_bg_markov1_pad5_width10/
• meme_out_inWT_not223_autocollapse_bg_markov0_pad5_width12/
• meme_out_inWT_not223_autocollapse_bg_markov0_pad6_width12/
• meme_out_inWT_not223_autocollapse_bg_markov0_pad7_width12/
• meme_out_inWT_not223_autocollapse_bg_markov1_pad7_width12/
• meme_out_inWT_not223_autocollapse_bg_markov1_pad7_width14/
• meme_out_inWT_not223_bg_markov1_pad5_width10/
• meme_out_inWTivt_notX0222ivt_alsoInX0222vWT_gmmscore1e3_dec14_pad15_width7/
• meme_out_inWTivt_notX0222ivt_alsoInX0222vWT_gmmscore1e3_dec14_pad5_width7/
• meme_out_inWTivt_notX0222ivt_alsoInX0222vWT_gmmscore1e3_dec14_pad7_width12/
• meme_out_inWTivt_notX0222ivt_alsoInX0222vWT_gmmscore1e3_dec14_pad7_width7/
• meme_out_inWTivt_notX0222ivt_alsoInX0222vWT_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWTivt_notX0223ivt_alsoInX0223vWT_gmmscore1e3_dec14_pad15_width7/
• meme_out_inWTivt_notX0223ivt_alsoInX0223vWT_gmmscore1e3_dec14_pad5_width7/
• meme_out_inWTivt_notX0223ivt_alsoInX0223vWT_gmmscore1e3_dec14_pad7_width12/
• meme_out_inWTivt_notX0223ivt_alsoInX0223vWT_gmmscore1e3_dec14_pad7_width7/
• meme_out_inWTivt_notX0223ivt_alsoInX0223vWT_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWTvIVT_and_X0222vIVT_notInX0222vWT_gmmscore1e3_dec14_pad7_width12/
• meme_out_inWTvIVT_and_X0222vIVT_notInX0222vWT_gmmscore1e3_dec14_pad7_width7/
• meme_out_inWTvIVT_and_X0222vIVT_notInX0222vWT_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWTvIVT_and_X0223vIVT_notInX0223vWT_gmmscore1e3_dec14_pad7_width12/
• meme_out_inWTvIVT_and_X0223vIVT_notInX0223vWT_gmmscore1e3_dec14_pad7_width7/
• meme_out_inWTvIVT_and_X0223vIVT_notInX0223vWT_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWTx214x219_andNOT_222_IXNS_gmmscore1e3_jan24_pad5_width10/
• meme_out_inWTx214x219_andNOT_222_IXNS_gmmscore1e3_jan24_pad5_width5/
• meme_out_inWTx214x219_andNOT_222_IXNS_gmmscore1e3_jan24_pad5_width7/
• meme_out_inWTx214x219_andNOT_222_IXNS_gmmscore1e3_jan24_pad7_width4/
• meme_out_inWTx214x219_andNOT_222_IXNS_gmmscore1e3_jan24_pad7_width7/
• meme_out_inWTx214x219_andNOT_222_gmmscore1e3_jan28_pad6_width6/
• meme_out_inWTx214x219_andNOT_223_IXNS_gmmscore1e3_jan24_pad5_width7/
• meme_out_inWTx214x219_andNOT_223_gmmscore1e3_jan28_pad6_width6/
• meme_out_ks1e5_yeast_jawsSep26nanocomp_results_noscale_ael_0_pad7/
• meme_out_ks1e5_yeast_jawsSep26nanocomp_results_noscale_ael_1_pad7/
• meme_out_leaf_500_dwellintense_pad12/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_minMaxScaler_-1_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_minMaxScaler_0_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_minMaxScaler_1_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_minMaxScaler_2_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_standardScaler_-1_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_standardScaler_0_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_standardScaler_1_pad10/
• meme_out_leaf_ERRORandSIGNAL_ksORgmm_1e5_46k_standardScaler_2_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_-1_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_0_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_1_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_2_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_3_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_4_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_-1_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_0_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_10_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_11_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_12_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_13_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_14_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_15_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_16_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_17_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_18_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_1_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_2_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_3_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_4_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_5_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_6_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_7_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_8_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_aelANDgcl_mins50_9_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_-1_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_0_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_1_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_2_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_3_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_4_pad10/
• meme_out_leaf_ERRORonlyMinMaxScale_ksORgmm_1e5_46k_minsize50_batchsize150_5_pad10/
• meme_out_leaf_ERRORonly_ksORgmm_1e5_46k_-1_pad10/
• meme_out_leaf_ERRORonly_ksORgmm_1e5_46k_0_pad10/
• meme_out_leaf_ERRORonly_ksORgmm_1e5_46k_1_pad10/
• meme_out_leaf_ERRORonly_ksORgmm_1e5_46k_2_pad10/
• meme_out_leaf_ERRORonly_ksORgmm_1e5_46k_3_pad10/
• meme_out_leaf_GMM_logit_pvalue_10000_4nMotifs_umapSignature_pad20/
• meme_out_leaf_GMM_logit_pvalue_1000_4nMotifs_umapSignature_pad20/
• meme_out_leaf_GMM_logit_pvalue_2500_6nMotifs_umapSignature_pad20/
• meme_out_leaf_GMM_logit_pvalue_7500_8nMotifs_umapSignature_pad20/
• meme_out_leaf_KS_intensity_pvalue_7500_8nMotifs_umapSignature_pad20/
• meme_out_leaf_dwell_2500_6n_pad20/
• meme_out_leaf_dwell_3500_6n_pad20/
• meme_out_leaf_dwell_5k_3n_pad12/
• meme_out_leaf_dwell_7500_6n_pad20/
• meme_out_leaf_gmm_1k_1n_pad12/
• meme_out_leaf_gmm_1k_pad12/
• meme_out_leaf_gmm_2500_5n_pad20/
• meme_out_leaf_gmm_3500_5n_pad20/
• meme_out_leaf_gmm_5k_3n_pad12/
• meme_out_leaf_gmm_7500_5n_pad20/
• meme_out_leaf_gmm_pad12/
• meme_out_leaf_intense_2500_6n_pad20/
• meme_out_leaf_intense_3500_6n_pad20/
• meme_out_leaf_intense_5k_3n_pad12/
• meme_out_leaf_intense_7500_6n_pad20/
• meme_out_leaf_ks10_sep12_results_cluster0_pad15/
• meme_out_leaf_ks10_sep12_results_cluster1_pad15/
• meme_out_leaf_ksORgmm_1e5_46k_-1_pad10/
• meme_out_leaf_ksORgmm_1e5_46k_0_pad10/
• meme_out_leaf_ksORgmm_1e5_46k_1_pad10/
• meme_out_leaf_pca_gmm_150test_3n_pad20/
• meme_out_leaf_pca_gmm_500test_6n_pad20/
• meme_out_leaf_peaks_gmmscore_dec14_pad10_width10/
• meme_out_leaf_peaks_gmmscore_dec14_pad7_width10/
• meme_out_leaf_peaks_gmmscore_pad5_width10/
• meme_out_leaf_peaks_gmmscore_pad7_width15/
• meme_out_leaf_top25k_umapdefault_ksIntensity_-1_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_0_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_1_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_2_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_3_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_4_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_5_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_6_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_7_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_8_pad10/
• meme_out_leaf_top25k_umapdefault_ksIntensity_9_pad10/
• meme_out_leaf_umap_gmm_500test_6n_pad20/
• meme_out_leaf_umap_intense_2500_6n_pad20/
• meme_out_leaf_umapsig_gmm_500test_6n_pad20/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_-1_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_0_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_1_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_2_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_3_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_4_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad5_-1_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad5_0_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad5_1_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad5_2_pad5/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad7_-1_pad7/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad7_0_pad7/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad7_1_pad7/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad7_2_pad7/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad7_3_pad7/
• meme_out_memeYEAST_nanorms_nanocomporeAll1e6_collapse3wind_5flank_minsize150_2epochs_rerun_pad7_4_pad7/
• meme_out_mlus_ks1e2_negControl_0_pad15/
• meme_out_mlus_ks1e2_negControl_1_pad15/
• meme_out_mlus_ks1e2_negControl_addPadtest_0_pad15/
• meme_out_mlus_ks1e2_negControl_addPadtest_1_pad15/
• meme_out_mlus_reclust_oct18_aelGCL_bc1500_2epock_-1_pad8/
• meme_out_mlus_reclust_oct18_aelGCL_bc1500_2epock_0_pad8/
• meme_out_mlus_reclust_oct18_aelGCL_bc1500_2epock_1_pad8/
• meme_out_mlusi_SHUFFLED_WTvsIVTpeaksgmm5_shuffled_april1223_fulltxome_markovorder0_pad7_width14/
• meme_out_mlusi_SHUFFLED_WTvsIVTpeaksgmm5_shuffled_april1223_fulltxome_markovorder1_pad7_width14/
• meme_out_mlusi_SHUFFLED_WTvsIVTpeaksgmm5_shuffled_april1223_fulltxome_markovorder2_pad7_width14/
• meme_out_mlusi_WTvsIVT_butshuffled_april1223_pad7_width14/
• meme_out_mlusi_WTvsIVT_peaks_gmm5_april1223_fulltxome_markovorder0_pad7_width14/
• meme_out_mlusi_WTvsIVT_peaks_gmm5_april1223_fulltxome_markovorder1_pad7_width14/
• meme_out_mlusi_WTvsIVT_peaks_gmm5_april1223_fulltxome_markovorder2_pad7_width14/
• meme_out_mlusi_WTvsIVT_peaks_gmm5_march3023_pad8_width12/
• meme_out_mlusi_WTvsIVT_pseudo_march3023_pad10_width15/
• meme_out_mlusi_WTvsIVT_pseudo_march3023_pad8_width12/
• meme_out_mlusi_X0222vsWT_peaks_gmm5_march3023_pad8_width12/
• meme_out_mlusi_nov_X0218vX0214_newliftGenome_30xMin_mods_txome_pad10_w20_GMMtop10k_pad10/
• meme_out_mlusi_nov_X0218vX0214_newliftGenome_30xMin_mods_txome_pad10_w20_kstop10k_pad10/
• meme_out_mlusi_nov_X0218vX0214_newliftGenome_30xMin_mods_txome_pad7_w14_GMMtop10k_pad7/
• meme_out_mlusi_nov_X0218vX0214_newliftGenome_30xMin_mods_txome_pad7_w14_kstop10k_pad5/
• meme_out_mlusi_nov_X0218vX0214_newliftGenome_30xMin_mods_txome_pad7_w14_kstop10k_pad7/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_modtxbgdMo0_pad5_width5/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_modtxbgdMo1_pad5_width5/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_modtxbgdMo2_pad5_width5/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width5/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width5/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width5/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_mods_txome_pad10_w20_GMMtop10k_pad10/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_mods_txome_pad10_w20_kstop10k_pad10/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_mods_txome_pad7_w14_GMMtop10k_pad7/
• meme_out_mlusi_nov_X0218vX0219_newliftGenome_30xMin_mods_txome_pad7_w14_kstop10k_pad7/
• meme_out_mlusibloom_wtVSivt_GMM3_pad8_width15/
• meme_out_mlusitanicus_allmods_X0218_X0219_nanocompore_40x_oct20_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mlusitanicus_allmods_X0218_X0219_nanocompore_40x_oct20_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mlusitanicus_allmods_X0218_X0219_nanocompore_40x_oct20_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mlusitanicus_allmods_X0218_X0219_nanocompore_40x_oct20_all_mods_pad5_w10_GMMtop10k_pad5/
• meme_out_mlusitanicus_allmods_X0218_X0219_nanocompore_40x_oct20_all_mods_pad5_w10_kstop10k_pad5/
• meme_out_mlusitanicus_allmods_nanocompore_40x_results_cluster0_pad15/
• meme_out_mlusitanicus_allmods_nanocompore_40x_results_cluster1_pad15/
• meme_out_mucci3_X0214_vIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mucci3_X0214_vIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mucci3_X0214_vIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mucci3_X0214_vIVT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucci3_X0214_vIVT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucci3_X0214_vIVT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucci3_X0214_vIVT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucci3_X0214_vIVT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucci3_X0214_vIVT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_modtxbgdMo0_pad5_width5/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_modtxbgdMo1_pad5_width5/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_modtxbgdMo2_pad5_width5/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width5/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width5/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mucci3_X0219_vIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width5/
• meme_out_mucci3_X0219_vIVT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucci3_X0219_vIVT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucci3_X0219_vIVT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucci3_X0219_vIVT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucci3_X0219_vIVT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucci3_X0219_vIVT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0214vWT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucciX0214vWT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0214vWT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0214vWT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucciX0214vWT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0214vWT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0219vWT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucciX0219vWT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0219vWT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0219vWT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucciX0219vWT_top2500_gmm_BG2_pad5_width6/
• meme_out_mucciX0219vWT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0219vWT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0222vIVT_LOR05_gmmscore1e3_clusteredTopGMM_bg_markov0_pad7_width12/
• meme_out_mucciX0222vIVT_LOR05_gmmscore1e3_clusteredTopGMM_bg_markov1_pad7_width12/
• meme_out_mucciX0222vIVT_LOR05_gmmscore1e3_clusteredTopGMM_bg_markov2_pad7_width12/
• meme_out_mucciX0222vIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mucciX0222vIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mucciX0222vIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mucciX0222vIVT_gmmscore1e3_dec14_pad7_width10/
• meme_out_mucciX0222vIVT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucciX0222vIVT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0222vIVT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0222vIVT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucciX0222vIVT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0222vIVT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0222vWT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucciX0222vWT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0222vWT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0222vWT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucciX0222vWT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0222vWT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0223vIVT_LOR05_gmmscore1e3_clusteredTopGMM_bg_markov0_pad7_width12/
• meme_out_mucciX0223vIVT_LOR05_gmmscore1e3_clusteredTopGMM_bg_markov1_pad7_width12/
• meme_out_mucciX0223vIVT_LOR05_gmmscore1e3_clusteredTopGMM_bg_markov2_pad7_width12/
• meme_out_mucciX0223vIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mucciX0223vIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mucciX0223vIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mucciX0223vIVT_gmmscore1e3_dec14_pad7_width10/
• meme_out_mucciX0223vIVT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucciX0223vIVT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0223vIVT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0223vIVT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucciX0223vIVT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0223vIVT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0223vWT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucciX0223vWT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0223vWT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucciX0223vWT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucciX0223vWT_top2500_gmm_BG2_pad5_width6/
• meme_out_mucciX0223vWT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucciX0223vWT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov0_pad5_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov0_pad7_width12/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov0_pad8_width15/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov1_pad5_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov1_pad7_width12/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov2_pad5_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_collapsedTopGMM_bg_markov2_pad7_width12/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_modtxbgdMo0_pad5_width5/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_modtxbgdMo1_pad5_width5/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_modtxbgdMo2_pad5_width5/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgdMo0_pad5_width5/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgdMo1_pad5_width5/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgdMo2_pad5_width5/
• meme_out_mucci_wtIVT_LOR05_gmmscore1e3_txomebgd_collapsedTopGMM_bg_markov0_pad5_width10/
• meme_out_mucci_wtIVT_top1500_gmm_BG0_pad7_width10/
• meme_out_mucci_wtIVT_top1k_gmm_bgMarkov1_pad5_width10/
• meme_out_mucci_wtIVT_top1k_gmm_noBgFile_pad7_width10/
• meme_out_mucci_wtIVT_top2500_gmm_BG0_pad5_width8/
• meme_out_mucci_wtIVT_top2500_gmm_bgMarkov1_pad5_width10/
• meme_out_mucci_wtIVT_top2500_gmm_noBgFile_pad7_width10/
• meme_out_mucci_wtVSivt_in750x_and_250x_gm1e3_BG0_pad7_width14/
• meme_out_mucci_wtVSivt_in750x_and_250x_gm1e3_BG0markov_pad7_width14/
• meme_out_mucci_wtVSivt_in750x_and_250x_gm1e3_defaultBG_pad5_width10/
• meme_out_mucci_wtVSivt_in750x_and_250x_gm1e3_defaultBG_pad6_width12/
• meme_out_mucci_wtVSivt_in750x_and_250x_gm1e3_defaultBG_pad7_width14/
• meme_out_mucci_wtVSivt_in750x_butNot_250x_gm1e3_BG0markov_pad6_width10/
• meme_out_mucci_wtVSivt_in750x_butNot_250x_gm1e3_noBG_pad6_width10/
• meme_out_mucci_wtX0218_vIVT_gmmscore1e3_dec14_pad7_width10/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_modtxbgdMo0_pad5_width5/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_modtxbgdMo1_pad5_width5/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_modtxbgdMo2_pad5_width5/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width5/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width5/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_mutVmut_negControl_X0214vX0219_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width5/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean1_motifs_5pad_pad5/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean1_motifs_pad10/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean2_motifs_5pad_pad5/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean2_motifs_pad10/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean3_motifs_5pad_pad5/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean3_motifs_pad10/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean4_motifs_5pad_pad5/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean4_motifs_pad10/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean5_motifs_5pad_pad5/
• meme_out_nanocomp_leaf_1e3_collapsed_13k_kmean5_motifs_pad10/
• meme_out_nanocomp_leaf_mar15_temp_first200_motifs_7pad_pad7/
• meme_out_nanocomp_leaf_mar21_1e3collapsed_signal_yellowcluster_pad7_pad5/
• meme_out_nanocomp_seedling_mar21_1e3collapsed_signal_yellowcluster_pad7_pad7/
• meme_out_nanocompore_7500_signalOnly_kmeans_1.0_pad10/
• meme_out_nanocompore_7500_signalOnly_kmeans_2.0_pad10/
• meme_out_nanocompore_7500_signalOnly_kmeans_3.0_pad10/
• meme_out_nanocompore_7500_signalOnly_kmeans_4.0_pad10/
• meme_out_nanocompore_7500_signalOnly_kmeans_5.0_pad10/
• meme_out_nanocompore_7500_signalOnly_kmeans_5pad1.0_pad5/
• meme_out_nanocompore_7500_signalOnly_kmeans_5pad2.0_pad5/
• meme_out_nanocompore_7500_signalOnly_kmeans_5pad3.0_pad5/
• meme_out_nanocompore_7500_signalOnly_kmeans_5pad4.0_pad5/
• meme_out_nanocompore_7500_signalOnly_kmeans_5pad5.0_pad5/
• meme_out_nanocompore_Near_MiCLIP5bp_leaf_noDRACH_pad8_width15/
• meme_out_nanocompore_Near_MiCLIP5bp_leaf_pad8_width15/
• meme_out_nanocompore_logite3_pad10_motif10_meme.html
• meme_out_nanocompore_notNearMiCLIP5bp_NODRACH_leaf_pad8_width15/
• meme_out_nanocompore_notNearMiCLIP5bp_leaf_pad8_width15/
• meme_out_nanorms_nanocomporeAll1e6_collapse5wind_5flank_minsize150_2epochs_rerun_0_pad5/
• meme_out_nanorms_nanocomporeAll1e6_nocollapse_5flank_minsize150_2epochs_rerun_-1_pad5/
• meme_out_nanorms_nanocomporeAll1e6_nocollapse_5flank_minsize150_2epochs_rerun_0_pad5/
• meme_out_nanorms_nanocomporeAll1e6_nocollapse_5flank_minsize150_2epochs_rerun_1_pad5/
• meme_out_nanorms_nanocomporeAll1e6_nocollapse_5flank_minsize150_2epochs_rerun_2_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_-1_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_0_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_1_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_2_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_3_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_4_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_5_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_6_pad5/
• meme_out_nanorms_nanocompore_3WINDOW_5flank_minsize150_3epochs_reru_7_pad5/
• meme_out_nanorms_onlyQ_min150_pad10_cluster0_pad10/
• meme_out_nanorms_onlyQ_min150_pad10_cluster1_pad10/
• meme_out_nanorms_onlyQ_min150_pad10_cluster2_pad10/
• meme_out_newMemeImg_onlyRMS_scaled_min150_pad6_cluster1_pad6/
• meme_out_newMemeImg_onlyRMS_scaled_min150_pad6_cluster3_pad6/
• meme_out_newMemeImg_onlyRMS_scaled_min150_pad6_cluster4_pad6/
• meme_out_newMemeImg_onlyRMS_scaled_min150_pad6_cluster5_pad6/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_modtxbgdMo0_pad5_width5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_modtxbgdMo1_pad5_width5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_modtxbgdMo2_pad5_width5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width10/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_txomebgdMo0_pad5_width5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width10/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_txomebgdMo1_pad5_width5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width10/
• meme_out_nov2_rerun_X0214vX0218_all_mods_LOR05_gmmscore1e3_txomebgdMo2_pad5_width5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_pad5_w10_GMMtop10k_pad5/
• meme_out_nov2_rerun_X0214vX0218_all_mods_pad5_w10_kstop10k_pad5/
• meme_out_onlyRMS_scaled_min150_pad5_cluster1_pad5/
• meme_out_onlyRMS_scaled_min150_pad5_cluster2_pad5/
• meme_out_onlyRMS_scaled_min150_pad5_cluster3_pad5/
• meme_out_onlyRMS_scaled_min150_pad5_cluster4_pad5/
• meme_out_onlyRMS_scaled_min150_pad5_cluster5_pad5/
• meme_out_onlyt_left_corner_allbases_jan6_foldchange_smallcluster_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_allbases_jan6_foldchange_smallclusterleft_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_allbases_jan6_foldchange_smallclusterright_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_allbases_jan6_logdwell_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_allbases_jan6_logdwell_standardscaler_pad5_pad5/
• meme_out_onlyt_left_corner_individual_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_onlyAs_jan6_logdwell_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_onlyCs_jan6_logdwell_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_onlyGs_jan6_logdwell_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_onlyTs_jan6_logdwell_standardscaler_pad10_pad10/
• meme_out_onlyt_left_corner_onlyTs_jan6_logdwell_standardscaler_pad15_pad15/
• meme_out_onlyt_left_corner_onlyTs_jan6_logdwell_standardscaler_pad20_pad20/
• meme_out_onlyt_left_corner_onlyTs_jan6_logdwell_standardscaler_pad5_pad5/
• meme_out_onlyt_left_corner_onlyTs_jan6_logdwell_standardscaler_pad7_pad7/
• meme_out_pseudo_ath_2repnanocomp_out_1e5_pad10/
• meme_out_pseudo_ath_2repnanocomp_out_1e5_pad12/
• meme_out_pseudo_ath_2repnanocomp_out_1e5_pad5/
• meme_out_pseudo_ath_2repnanocomp_out_1e5_pad7/
• meme_out_published_ath_pseudo_genome_pad10/
• meme_out_pval_ivt_vs_leaf_higher_pad20_top1000_30wide_pad20/
• meme_out_pval_ivt_vs_leaf_higher_pad20_top1000_pad20/
• meme_out_pval_ivt_vs_leaf_lower_pad20_top1000_30wide_pad20/
• meme_out_pval_ivt_vs_leaf_lower_pad20_top1000_pad20/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster0_pad10_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster0_pad6_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster0_pad7_width10/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster0_pad8_width12/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster1_pad10_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster1_pad6_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster1_pad7_width10/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster1_pad8_width12/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster2_pad10_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster2_pad6_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster2_pad7_width10/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster2_pad8_width12/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster3_pad10_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster3_pad6_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster3_pad7_width10/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster3_pad8_width12/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster4_pad10_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster4_pad6_width8/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster4_pad7_width10/
• meme_out_recluster_nanoRMSfromSlide_april10_2023_cluster4_pad8_width12/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster0_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster1_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster2_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster3_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster4_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster5_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster6_pad7_width10/
• meme_out_recluster_nanoRMSgpuFromOldBook_april10_2023_cluster7_pad7_width10/
• meme_out_recluster_nanoRMSyanoFromOldBook_april10_2023_cluster0_pad8_width12/
• meme_out_recluster_nanoRMSyanoFromOldBook_april10_2023_cluster1_pad8_width12/
• meme_out_recluster_nanoRMSyanoFromOldBook_april10_2023_cluster2_pad8_width12/
• meme_out_recluster_nanoRMSyanoFromOldBook_april10_2023_cluster3_pad8_width12/
• meme_out_recluster_nanoRMSyanoFromOldBook_april10_2023_cluster4_pad8_width12/
• meme_out_recluster_nanoRMSyanoFromOldBook_april10_2023_cluster5_pad8_width12/
• meme_out_rhizoMutIvt_mods_gmmscore3_jan9_pad5_width7/
• meme_out_rhizoMutIvt_mods_gmmscore5_jan9_pad5_width7/
• meme_out_rhizoMutIvt_mods_gmmscore5_jan9_pad7_width10/
• meme_out_rhizoMutIvt_mods_gmmscore5_jan9_pad7_width12/
• meme_out_rhizoMutIvt_peaks_gmmscore5_jan9_pad10_width10/
• meme_out_rhizoMutIvt_peaks_gmmscore5_jan9_pad7_width12/
• meme_out_rhizoMutIvt_peaks_gmmscore5_jan9_pad7_width7/
• meme_out_rhizoMutIvt_peaks_gmmscore5_jan9_pad9_width15/
• meme_out_rhizoMutIvt_rerun1e3lor_pad5_width10/
• meme_out_rhizoMutIvt_rerun1e3lor_pad8_width12/
• meme_out_rhizoMutIvt_rerun1e7lor_pad5_width10/
• meme_out_rhizoMutIvt_rerun1e7lor_pad8_width12/
• meme_out_rhizoMutWT_mods_gmmscore3_jan9_pad5_width7/
• meme_out_rhizoMutWT_mods_gmmscore5_jan9_pad5_width7/
• meme_out_rhizoMutWT_mods_gmmscore5_jan9_pad7_width10/
• meme_out_rhizoMutWT_mods_gmmscore5_jan9_pad7_width12/
• meme_out_rhizoMutWT_peaks_gmmscore5_jan9_pad10_width10/
• meme_out_rhizoMutWT_peaks_gmmscore5_jan9_pad7_width12/
• meme_out_rhizoMutWT_peaks_gmmscore5_jan9_pad7_width7/
• meme_out_rhizoMutWT_peaks_gmmscore5_jan9_pad9_width15/
• meme_out_rhizoMutWtivt_rerun1e3lor_pad5_width10/
• meme_out_rhizoMutWtivt_rerun1e3lor_pad8_width12/
• meme_out_rhizoMutWtivt_rerun1e7lor_pad5_width10/
• meme_out_rhizoMutWtivt_rerun1e7lor_pad8_width12/
• meme_out_rhizoWTivt_rerun1e3lor_pad5_width10/
• meme_out_rhizoWTivt_rerun1e3lor_pad8_width12/
• meme_out_rhizoWTivt_rerun1e7lor_pad5_width10/
• meme_out_rhizoWTivt_rerun1e7lor_pad8_width12/
• meme_out_rhizoWtIvt_mods_gmmscore3_jan9_pad5_width7/
• meme_out_rhizoWtIvt_mods_gmmscore5_jan9_pad5_width7/
• meme_out_rhizoWtIvt_mods_gmmscore5_jan9_pad7_width10/
• meme_out_rhizoWtIvt_mods_gmmscore5_jan9_pad7_width12/
• meme_out_rhizoWtIvt_peaks_gmmscore5_jan9_pad10_width10/
• meme_out_rhizoWtIvt_peaks_gmmscore5_jan9_pad7_width12/
• meme_out_rhizoWtIvt_peaks_gmmscore5_jan9_pad7_width7/
• meme_out_rhizoWtIvt_peaks_gmmscore5_jan9_pad9_width15/
• meme_out_rhizo_SHUFFLED_MutvsIVTpeaksgmm5_shuffled_april1223_pad7_width14/
• meme_out_rhizo_SHUFFLED_WTvsIVTpeaksgmm5_shuffled_april1223_pad7_width14/
• meme_out_rhizo_WTvsIVTpeaksgmm5_april1223_pad7_width14/
• meme_out_rootIVT_rerun1e3lor_pad5_width10/
• meme_out_rootIVT_rerun1e3lor_pad8_width12/
• meme_out_rootIVT_rerun1e7lor_pad5_width10/
• meme_out_rootIVT_rerun1e7lor_pad8_width12/
• meme_out_root_brassica_NOaelGCL_cluster_0_pad10_width12/
• meme_out_root_brassica_NOaelGCL_cluster_0_pad8_width12/
• meme_out_root_brassica_NOaelGCL_cluster_1_pad10_width12/
• meme_out_root_brassica_NOaelGCL_cluster_1_pad8_width12/
• meme_out_root_peaks_gmmscore_dec14_pad10_width10/
• meme_out_root_peaks_gmmscore_dec14_pad5_width7/
• meme_out_root_peaks_gmmscore_dec14_pad7_width10/
• meme_out_seed_GMM_logit_pvalue_10000_4nMotifs_umapSignature_pad20/
• meme_out_seed_GMM_logit_pvalue_1000_4nMotifs_umapSignature_pad20/
• meme_out_seed_GMM_logit_pvalue_2500_6nMotifs_umapSignature_pad20/
• meme_out_seedling_brassica_NOaelGCL_cluster_0_pad8_width12/
• meme_out_seedling_brassica_NOaelGCL_cluster_1_pad8_width12/
• meme_out_seedling_brassica_aelGCL_2epoch_batch512_cluster0_pad8_width12/
• meme_out_seedling_brassica_aelGCL_2epoch_batch512_cluster1_pad8_width12/
• meme_out_seedling_brassica_aelGCL_2epoch_batch512_cluster2_pad8_width12/
• meme_out_seedling_brassica_aelGCL_3epoch_batch256_cluster0_pad8_width12/
• meme_out_seedling_brassica_aelGCL_3epoch_batch256_cluster1_pad8_width12/
• meme_out_seedling_brassica_aelGCL_3epoch_batch256_cluster2_pad8_width12/
• meme_out_seedling_brassica_aelGCL_cluster_0_pad8_width15/
• meme_out_seedling_brassica_aelGCL_cluster_1_pad8_width15/
• meme_out_seedling_peaks_gmmscore_dec14_pad10_width10/
• meme_out_seedling_peaks_gmmscore_dec14_pad7_width10/
• meme_out_seedling_peaks_gmmscore_pad5_width10/
• meme_out_seedling_peaks_gmmscore_pad7_width15/
• meme_out_seedling_resampleOct18_clustering-1_pad8/
• meme_out_seedling_resampleOct18_clustering0_pad8/
• meme_out_seedling_resampleOct18_clustering1_pad8/
• meme_out_seedling_resampleOct18_clustering2_pad8/
• meme_out_seedling_resampleOct18_clustering3_pad8/
• meme_out_seedling_resampleOct18_clustering4_pad8/
• meme_out_seedling_resampleOct18_clustering_pad10_W150_pad10/
• meme_out_seedling_resampleOct18_clustering_pad10_W151_pad10/
• meme_out_seedling_resampleOct18_clustering_pad10_W152_pad10/
• meme_out_seedling_resampleOct18_clustering_pad10_W153_pad10/
• meme_out_seedling_resampleOct18_clustering_pad10_W154_pad10/
• meme_out_seedling_resampleOct18_clustering_pad5_W10-1_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W100_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W101_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W102_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W103_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W104_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster-1_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster0_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster1_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster2_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster3_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster4_pad5/
• meme_out_seedling_resampleOct18_clustering_pad5_W10_Recluster5_pad5/
• meme_out_shootIVT_rerun1e3lor_pad5_width10/
• meme_out_shootIVT_rerun1e3lor_pad8_width12/
• meme_out_shootIVT_rerun1e7lor_pad5_width10/
• meme_out_shootIVT_rerun1e7lor_pad8_width12/
• meme_out_shoot_peaks_gmmscore_dec14_pad10_width10/
• meme_out_shoot_peaks_gmmscore_dec14_pad5_width7/
• meme_out_shoot_peaks_gmmscore_dec14_pad7_width10/
• meme_out_shoot_peaks_gmmscore_dec14_pad7_width7/
• meme_out_t-test_higher_pad20_top1000_30wide_pad20/
• meme_out_t-test_higher_pad20_top1000_pad20/
• meme_out_t-test_lower_pad20_top1000_30wide_pad20/
• meme_out_t-test_lower_pad20_top1000_pad20/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster0_pad10_width10_pad10/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster0_pad12_width8_pad12/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster0_pad5/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster0_pad5_width12_pad5/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster0_pad5_width8_pad5/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster0_pad7_width10_pad7/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster1_pad10_width10_pad10/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster1_pad12_width8_pad12/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster1_pad5/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster1_pad5_width12_pad5/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster1_pad5_width8_pad5/
• meme_out_test_clusters_sigDiff-gputest-10k_cluster1_pad7_width10_pad7/
• meme_out_test_leaf_pseudo_script_nobg_1e4_pad10/
• meme_out_test_leaf_pseudo_script_nobg_pad10/
• meme_out_test_leaf_pseudo_script_wbg_1e4_pad10/
• meme_out_test_yeast_1e2_gmm_width7_pad7_pad7/
• meme_out_test_yeast_1e4_dwell_width7_pad7_pad7/
• meme_out_test_yeast_1e4_gmm_width7_pad7_pad7/
• meme_out_test_yeast_1e4_ksintensity_width7_pad7_pad7/
• meme_out_top_100_polya_tail_difference_X0223_pad7_width10/
• meme_out_v2_onlyRMS_scaled_min150_pad6_cluster0_pad7/
• meme_out_v2_onlyRMS_scaled_min150_pad6_cluster1_pad7/
• meme_out_v2_onlyRMS_scaled_min150_pad6_cluster2_pad7/
• meme_out_v2_onlyRMS_scaled_min150_pad6_cluster3_pad7/
• meme_out_v2_onlyRMS_scaled_min150_pad6_cluster4_pad7/
• meme_out_v2_onlyRMS_scaled_min150_pad6_cluster5_pad7/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster0_pad8/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster1_pad8/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster2_pad8/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster3_pad8/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster4_pad8/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster5_pad8/
• meme_out_v3_scaledOnlyRMS_min150_pad8_cluster6_pad8/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad10_cluster0_pad10/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad10_cluster1_pad10/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad10_cluster2_pad10/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad10_cluster3_pad10/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad10_cluster4_pad10/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad12_cluster0_pad12/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad12_cluster1_pad12/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad12_cluster2_pad12/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad12_cluster3_pad12/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad12_cluster4_pad12/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad6_cluster0_pad6/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad6_cluster1_pad6/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad6_cluster2_pad6/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad6_cluster3_pad6/
• meme_out_v4_noneg_scaledOnlyRMS_min150_pad6_cluster4_pad6/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_-1_pad5/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_0_pad5/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_1_pad5/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_2_pad5/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_3_pad5/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_4_pad5/
• meme_out_wMeanTraceDiff_nanorms_nanocompore_3WINDOW_5flank_minsize150_4epochs_ael_gcl_5_pad5/
• meme_out_wtX0218_gmm001_Only_multIntersect_top15_pad10_width5/
• meme_out_wtX0218_gmm001_Only_multIntersect_top15_pad3_width5/
• meme_out_wtX0218_gmm001_Only_multIntersect_top15_pad5_width5/
• meme_out_wtX0218_gmm001_Only_multIntersect_top15_pad5_width7/
• meme_out_wtX0218_gmm001_Only_multIntersect_top15_pad7_width10/
• meme_out_wtX0218_gmm001_Only_multIntersect_top15_pad7_width7/
• meme_out_wtX0218_vIVT_0.001_xporeANDnanocompore_meme_pad10_width12/
• meme_out_wtX0218_vIVT_0.001_xporeANDnanocompore_meme_pad8_width12/
• meme_out_wtX0218_vIVT_1e-05_xporeANDnanocompore_meme_pad10_width12/
• meme_out_wtX0218_vIVT_1e-07_xporeANDnanocompore_meme_pad8_width12/
• meme_out_wtX0218_vIVT_1e3_xporeANDnanocompore_meme_pad8_width12/
• meme_out_wtX0218_vIVT_autocollapse_bg_markov0_pad5_width12/
• meme_out_wtX0218_vIVT_autocollapse_bg_markov0_pad6_width12/
• meme_out_wtX0218_vIVT_autocollapse_bg_markov0_pad7_width12/
• meme_out_wtX0218_vIVT_autocollapse_bg_markov1_pad7_width14/
• meme_out_wtX0218_vIVT_bg_markov1_pad5_width10/
• meme_out_wtX0218_vIVT_gmm001_autocollapse_bg_markov0_pad7_width12/
• meme_out_wtX0218_vIVT_gmm001_gmmscore1e3_jan23_pad5_width10/
• meme_out_wtX0218_vIVT_gmm001_gmmscore1e3_padw10_jan30_pad10_width10/
• meme_out_wtX0218_vIVT_gmm001_gmmscore1e3_padw10_jan30_pad7_width10/
• meme_out_wtX0218_vIVT_gmm_1e5_gmmscore1e5_jan29_pad7_width7/
• meme_out_wtX0218_vIVT_rerun1e3lor_pad5_width10/
• meme_out_wtX0218_vIVT_rerun1e3lor_pad8_width12/
• meme_out_wtX0218_vIVT_rerun1e7lor_pad5_width10/
• meme_out_wtX0218_vIVT_rerun1e7lor_pad8_width12/
• meme_out_xleaf_test_pad20/
• meme_out_xpore_X0223_1e10_18k_pad8_width15/
• meme_out_xpore_X0223_higher_1e4_8k_pad7_width15/
• meme_out_xpore_X0223_lower_1e4_8k_pad7_width15/
• meme_out_xpore_X0223_ttest_1e3_43k_pad8_width15/
• meme_out_xpore_X0223_ttest_1e4_20k_pad8_width15/
• meme_out_xpore_X0223_ttest_1e5_10k_pad8_width15/
• meme_out_yanocomp+g-test_fdr_top1000_flank5_n3_motifs_pad10/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_-1_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_0_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_10_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_11_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_12_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_1_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_2_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_3_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_4_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_5_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_6_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_7_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_8_pad5/
• meme_out_yanocomp_epinanoRMSUnion_nanocomporeKScollapsed_signalOnly_gcloss5epoch_9_pad5/
• meme_out_yanocomp_wind5_txmaster_3motifs_pad10/
• meme_out_yeastVsIVT_rerun1e3lor_pad5_width10/
• meme_out_yeastVsIVT_rerun1e3lor_pad8_width12/
• meme_out_yeastVsIVT_rerun1e7lor_pad5_width10/
• meme_out_yeastVsIVT_rerun1e7lor_pad8_width12/
• meme_out_yeast_diffOnly_standardScale_aelGCL_-1_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_0_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_10_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_11_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_1_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_2_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_3_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_4_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_5_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_6_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_7_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_8_pad10/
• meme_out_yeast_diffOnly_standardScale_aelGCL_9_pad10/
• meme_out_yeast_intensityAnd5intensity_1e10_cluster0_pad7_width10_pad7/
• meme_out_yeast_jawsSep26nanocomp_results_scaled_dwellGMMksintensity_1e3_gclael_-1_pad7/
• meme_out_yeast_jawsSep26nanocomp_results_scaled_dwellGMMksintensity_1e3_gclael_0_pad7/
• meme_out_yeast_jawsSep26nanocomp_results_scaled_dwellGMMksintensity_1e3_gclael_1_pad7/
• meme_out_yeast_jawsSep26nanocomp_results_scaled_dwellGMMksintensity_1e3_gclael_2_pad7/
• meme_out_yeast_nanocompore_n14448_collapsed_wind5_pad5_pad5/
• meme_out_yeast_nanocompore_n14448_collapsed_wind5_pad5_v2_pad5/
• meme_out_yeast_nanorms_n3185_pad10_pad10/
• meme_out_yeast_nanorms_n3185_pad12_pad12/
• meme_out_yeast_nanorms_n3185_pad5_pad5/
• meme_out_yeast_nanorms_n3185_pad7_pad7/
• meme_out_yeast_nanorms_nanocomp_1e5_uncollapsed_5flank_minsize150_5epochs_posfix_0_pad5/
• meme_out_yeast_nanorms_nanocomp_1e5_uncollapsed_5flank_minsize150_5epochs_posfix_1_pad5/
• meme_out_yeast_nanorms_nanocomp_1e5_uncollapsed_5flank_minsize150_5epochs_posfix_2_pad5/
• meme_out_yeast_newREF_newNative_scaled_-1_pad10/
• meme_out_yeast_newREF_newNative_scaled_0_pad10/
• meme_out_yeast_newREF_newNative_scaled_1_pad10/
• meme_out_yeast_newREF_newNative_unscaled_-1_pad10/
• meme_out_yeast_newREF_newNative_unscaled_0_pad10/
• meme_out_yeast_newREF_newNative_unscaled_1_pad10/
• meme_out_yeast_newREF_newNative_unscaled_batch250_0_pad10/
• meme_out_yeast_newREF_newNative_unscaled_batch250_1_pad10/
• meme_out_yeast_newREF_newNative_unscaled_batch250_aelGCL_-1_pad10/
• meme_out_yeast_newREF_newNative_unscaled_batch250_aelGCL_0_pad10/
• meme_out_yeast_newREF_newNative_unscaled_batch250_aelGCL_1_pad10/
• meme_out_yeast_rerun_prevGenome_june2022_14kSites_pad10/
• meme_out_yeast_rerun_prevGenome_june2022_9k_e5_Sites_V2_pad10/
• meme_out_yeast_rerun_prevGenome_june2022_9k_e5_Sites_pad10/
• meme_out_yeast_standard_scaled_errorOnly_sept5_0_pad10/
• meme_out_yeast_standard_scaled_errorOnly_sept5_1_pad10/
• meme_out_yeast_standard_scaled_errorOnly_sept5_2_pad10/
• meme_out_yeast_standard_scaled_errorOnly_sept5_3_pad10/
• meme_out_yeast_standard_scaled_werror_sept5_-1_pad10/
• meme_out_yeast_standard_scaled_werror_sept5_0_pad10/
• meme_out_yeast_standard_scaled_werror_sept5_1_pad10/
• meme_out_yeast_standard_scaled_werror_sept5_2_pad10/
• meme_out_yeast_top25k_gmmKsEach_50k_aelGCL_min75_-1_pad5/
• meme_out_yeast_top25k_gmmKsEach_50k_aelGCL_min75_0_pad5/
• meme_out_yeast_top25k_gmmKsEach_50k_aelGCL_min75_1_pad5/
• meme_out_yeast_top25k_gmmKsEach_50k_aelGCL_min75_2_pad5/
• meme_out_yeast_with_available_error_data_And_signal_diff_results_4epoch_sep13data_label_rrr-1_pad20_pad20/
• meme_out_yeast_with_available_error_data_And_signal_diff_results_4epoch_sep13data_label_rrr0_pad20_pad20/
• meme_out_yeast_with_available_error_data_And_signal_diff_results_4epoch_sep13data_label_rrr1_pad20_pad20/
• meme_out_yeast_with_available_error_data_And_signal_diff_results_4epoch_sep13data_label_rrr2_pad20_pad20/
• meme_out_yeast_with_available_error_data_And_signal_diff_results_4epoch_sep13data_label_rrr3_pad20_pad20/
• meme_out_yeast_xpore_n12998_pad5_v2_TTEST_pad5/
• meme_out_yeast_xpore_n26922_pad5_pad5/
• meme_out_yeast_xpore_n26922_pad5_v2_pad5/
• meme_out_yeast_xpore_n5138_pad5_v2_TTEST_pad5/
• meme_out_yeast_xpore_n5138_pad7_v2_TTEST_pad7/
• meme_out_yeast_xpore_n53573_pad7_v2_w13_n10_pad7/
• meme_out_yellow_hdbscan_pad20/
• motifsmeme_out_test_alone_pad20/
• xpore/