]> meme /global/cscratch1/sd/mmingay/direct_rna_2021/clustering/motifs/X0191_ctrlX0203_pseu_refpos_pad10_context.fa -oc /global/cscratch1/sd/mmingay/direct_rna_2021/clustering/motifs/meme_out_X0191_ctrlX0203_pseu_refpos_pad10/ -rna -maxsize 10000000 -mod zoops -nmotifs 5 -minw 4 -maxw 12 7e9ec6cde4d1 zoops 5 inf E-value of product of p-values 0 4 12 11 1 yes yes 2 892 0.8 uni 0.5 dirichlet 0.01 50 1e-05 892 17840 0 -1 -1 none Stopped because requested number of motifs (5) found. 0.233 0.178 0.197 0.392 57 -104 -127 31 -30 9 -3 13 27 -1426 186 -1426 -1426 -1426 234 -1426 210 -1426 -1426 -1426 -1426 -1426 -1426 135 -76 -212 -95 88 -99 -112 -69 79 -30 -254 -52 71 -5 -17 43 -15 13 -254 40 21 -43 -60 5 37 0.346939 0.086735 0.081633 0.484694 0.188776 0.188776 0.193878 0.428571 0.280612 0.000000 0.719388 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.137755 0.040816 0.102041 0.719388 0.117347 0.081633 0.122449 0.678571 0.188776 0.030612 0.137755 0.642857 0.224490 0.158163 0.265306 0.352041 0.255102 0.030612 0.260204 0.454082 0.173469 0.117347 0.204082 0.505102 [UA]U[GA]GAUUUU[UGA][UGA][UG] ATAC TCTC TTTG AAAT CTTG GATG TCCA CTTT TCG ATTGT GTCG ATTG GCAG CCAA C ACCAAAT GAAC ACCA AA TAGGGA TAA TAGGG GTAA TAGG TAA TAGGG GTAA TAGG AA TAGGGA TAA TAGGG AAT TTTCA TTT TTGTT ATTT TTGT CTT TTTTT ACTT TTTT GTT GCTTA TTG ATCAG TTTG ATCA TTTG GTCA TAAA TTGG CGTG AGAT TCAC TTGT TTTG GAAA TGTT CAGT CGTT GGTT CGTT GGTT CCTC CTTC TGGT TAGC ACAA AGTT CTC ATCTG ACTC ATCT ACTC ATCT ACTC ATCT ACTC ATCT CTC ATCTG ACTC ATCT CTC ATCTG ACTC ATCT ACTC ATCT ATTG CTAC TGTA TTTA TGC ATTTC TTGC ATTT AGTA GAAC AGTA GAAC AGTA GAAC CTTT TTGG ATC TTATT GGGT TGGG TTGT CTTC TTGT CTTC TCCC GACA AAA TTACG AGTC ATAT AATT AATA TTAT ATTT TATT TTGT TATT TTGT GTTT GATC CTTT CCTT G GTTCATG GCTG GTTC TATGGTTT A TATGGTT GAAA TATG CTTT GAGC TTT GAAGT TTTT GAAG GGTT AAAA TTGG ATTT TTCA TAGT TATG GACT TATG GACT TATG GACT TGGT TTCA GTTT ATTG AG GACTAT GTAG GACT AAGA TTTT ATGT TTGT T CTCTGTT AAGA TATA AGTA TTAT TATG GAAA TCAC CTAA A CATGTAC AGTCTTGT TTTA AGTC TTGT TGGA TTTT GCTT ATAT GTGT GGTA ATTT GTT CCGGA GTCT GGAA CAGT AAAG AAT CTGTG TAAT CTGT GATA TACA CC GTGAGA TGG TTGCA ATGG TTGC GGACATGG TGTT TACT TTTA TCAT CTCT GGAA CTCT GGAA CCTG AAGA CTAC TTTG ATCT ATGA ACGC AACG ATTG ATTA A AGACAGA TATA AGAC TG CTTCTC CTTT GTTA TTTT TTTG TTTG TAGT AAT CCATT AGC GAAAC TTTT GACG TTTA ATGC TTAT AAGT TGTT AAAC TGTC TGTT TGTC TGTT TGTA TATT AGCA GTAT TTTTTGAG ACTA TTAT TGTG GGGG TGTG AGAG TGTG GATA ATCG TTTC CATT TCCA TCTT TTCT TT TCTTTA GTTT TCTT TTAC AATT TTAC AATT TTAC AATT ATCA TCTC GTAA TGTT CGCT ACAC ATCTTGGA GACA ATCT CAAT AAAG TGTC CTGG TTTG CTTT TTGC AACT CCTC AATG AACT TGGA GTGC GATT TTTTGGAC ATAT TGTA ATAT TGTA TCTC CTTT TCTC CTTT TCTC CTTT TCTC CTTT ATAGGACG GGTG CTTT AATA AAAG AT ACTTGT G TTATGGT CTAT ATTT TTGG TTCT TTTT TATG TAAT AGGG GAGA TTGT CATGCTGG TT CTAGGC CTTA TCAC GGTT TTGT TG AGACTG GA TTAACT T ATGTTAA CAAA AATG AGTA GCTT TGTC GAAT CCAT TTCT ACTT GGAA CGAT TATT TCAG CAGA CCAG TAAT ACCCCTAA TTTG AGAT ATAT ACGT GATTCCAC AGGA TTGT TGAA AAAT 36 -83 -1097 62 -1097 17 60 35 10 134 -198 -65 169 -83 -1097 -138 -1097 -83 219 -1097 210 -1097 -1097 -1097 -1097 249 -1097 -1097 203 -1097 -1097 -296 -1097 -1097 -1097 135 -1097 -1097 234 -1097 -1097 175 -1097 3 -1097 -1097 2 103 0.300000 0.100000 0.000000 0.600000 0.000000 0.200000 0.300000 0.500000 0.250000 0.450000 0.050000 0.250000 0.750000 0.100000 0.000000 0.150000 0.000000 0.100000 0.900000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.950000 0.000000 0.000000 0.050000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 0.200000 0.800000 [UA][UGC][CAU]AGACAUG[CU][UG] T ACTAAGT TTTCCTCT T ACTAAGT TTTCCTCT T ACTAAGT TTTCCTCT A TGCCATA A TGCCATA G TGTATTT A TACTGAA A TACTGAA T TCCTCAA A TCTGGCA A CTGATGA GGTCGTGT T TGCTCAA A GTTTGGA ATCAAGCC TC CTCATA A GAACATT -1097 149 -98 3 -1097 -183 -1097 128 -1097 -1097 -1097 135 -1097 -1097 -198 128 136 -1097 -1097 3 -1097 249 -1097 -1097 -1097 226 -198 -197 -1097 -183 227 -1097 -222 -1097 183 -65 -1097 -1097 -198 128 -1097 117 -1097 62 0.000000 0.500000 0.100000 0.400000 0.000000 0.050000 0.000000 0.950000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.050000 0.950000 0.600000 0.000000 0.000000 0.400000 0.000000 1.000000 0.000000 0.000000 0.000000 0.850000 0.050000 0.100000 0.000000 0.050000 0.950000 0.000000 0.050000 0.000000 0.700000 0.250000 0.000000 0.000000 0.050000 0.950000 0.000000 0.400000 0.000000 0.600000 [CU]UUU[AU]CCG[GU]U[UC] TTTCAT ATG TGTCAAG TC TGTCAAG TC TCTTTG AAA TGCAGC AGA ATTGTGT AT GATTAAT TG CCAGTC CTC GCAATTACG CAGTGGA GC ACGTTT TGC ACGTTT TGC ATTACCA GA TAGGTAGA A TCCCAGACT TCTACAA GT TATTTA TTG AGTGGG TGC TGCTAG CTG CTGCTAG CT 106 -79 42 -141 77 10 106 -1273 114 -359 -94 -9 10 65 125 -1273 41 105 -1273 -28 -118 202 -1273 -115 -240 -1273 -216 122 -1273 -1273 -1273 135 -240 -1273 -1273 129 -1273 -259 230 -1273 47 80 -1273 -9 -82 -79 -29 62 0.485294 0.102941 0.264706 0.147059 0.397059 0.191176 0.411765 0.000000 0.514706 0.014706 0.102941 0.367647 0.250000 0.279412 0.470588 0.000000 0.308824 0.367647 0.000000 0.323529 0.102941 0.720588 0.000000 0.176471 0.044118 0.000000 0.044118 0.911765 0.000000 0.000000 0.000000 1.000000 0.044118 0.000000 0.000000 0.955882 0.000000 0.029412 0.970588 0.000000 0.323529 0.308824 0.000000 0.367647 0.132353 0.102941 0.161765 0.602941 [AG][GA][AU][GCA][CUA]CUUUG[UAC]U TT TGTGTT TT TGTGTT AA ACTCGC A TCTTGCT AA TCTTGC TC GTTGTT TT GACAAT TG CTCATG CG ATGAGG GA AAGCAG GA AAGCAG TG CTGCAC CT GCTGTA TT CTGTAG AA GTGATA GT GTGTCG TG TTGTAG TC GAGATC TTA GTTTT TAC ATCTA TAC ATCTA AG AACCAA GA CGGCAT TC TTCTCC AT CTGTTA TT GAACTG CC TGGGGC TT AAGGCT GT TCTGAA AG CTTGTT AA TTTCGG AT CGGAGC AA TTTTGT AT TCACCT TT TATGGA AC GGACAA GAG TAGTA CG TTTCTG TCG TTTCT AA TTCTAT AG TATAAA AA TCTTTT TAAAA TCT TT TTTGTC AG TGTACA TT GTTGCC AT TGAAAC TCT GCAGC GC AAGAAG AT GAAGGA TT CTTTTA TCTTCTA T GT TGAATG GT TGAATG TT TAAGAT AC AAGTCA GTG TCTCA AA TTTTAC AT TCGCTT CT AACAAA AA TGTAAC TG TTCGGG CT TTTGTT TC TGGCAT TC TTCTAC TT CTGTGC AAG CTTCC TG GTTACA 99 160 -1035 -1035 -1035 -21 -36 82 99 -1035 145 -1035 -1035 38 196 -1035 198 -1035 -136 -1035 -1035 -121 -1035 124 -60 -1035 -1035 111 -1035 249 -1035 -1035 99 111 -36 -1035 -1035 -1035 -1035 135 -1035 249 -1035 -1035 -60 -1035 145 -35 0.461538 0.538462 0.000000 0.000000 0.000000 0.153846 0.153846 0.692308 0.461538 0.000000 0.538462 0.000000 0.000000 0.230769 0.769231 0.000000 0.923077 0.000000 0.076923 0.000000 0.000000 0.076923 0.000000 0.923077 0.153846 0.000000 0.000000 0.846154 0.000000 1.000000 0.000000 0.000000 0.461538 0.384615 0.153846 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.153846 0.000000 0.538462 0.307692 [CA]U[GA][GC]AUUC[AC]UC[GU] TCTA TGTG TCTA TGTG TCGTCGTT ATCTCATG GTGC GTCA AGTTCGAT TGTG GTTG TGTG GTTG TAACTTCG ACAA GTCG ATAT ATAA ATAT ATAA CTCT GAAA