]> meme /global/cscratch1/sd/mmingay/direct_rna_2021/clustering/motifs/X0192_ctrlX0203_pseu_refpos_pad10_context.fa -oc /global/cscratch1/sd/mmingay/direct_rna_2021/clustering/motifs/meme_out_X0192_ctrlX0203_pseu_refpos_pad10/ -rna -maxsize 10000000 -mod zoops -nmotifs 5 -minw 4 -maxw 12 7e9ec6cde4d1 zoops 5 inf E-value of product of p-values 0 4 12 11 1 yes yes 2 1423 0.8 uni 0.5 dirichlet 0.01 50 1e-05 1423 28460 0 -1 -1 none Stopped because requested number of motifs (5) found. 0.229 0.184 0.199 0.388 -16 -117 -98 66 -16 -20 22 6 11 -69 -61 39 -44 -17 -23 36 43 -1491 180 -1491 -1491 -1491 233 -1491 212 -1491 -1491 -1491 -1491 -1491 -1491 136 -68 -191 -129 90 -78 -46 -80 67 -47 -112 -50 65 3 -129 62 -1 0.205212 0.081433 0.100977 0.612378 0.205212 0.159609 0.231270 0.403909 0.247557 0.114007 0.130293 0.508143 0.169381 0.162866 0.169381 0.498371 0.309446 0.000000 0.690554 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.143322 0.048860 0.081433 0.726384 0.133550 0.133550 0.114007 0.618893 0.166124 0.084691 0.140065 0.609121 0.234528 0.074919 0.306189 0.384365 [UA][UGA][UA]U[GA]GAUUUU[UGA] T ATAAATG TT ATAAAT CT ATGATG TT GAATCA TC GAAAGA C AGTTTTT AC AGTTTT CGTAGCAC CG TCGGTT C TGCCAAG GC TGCCAA TT GTGAAA T CTAGGAT TT CTAGGA AT GTTCTC GA TCTCTT G TGGCTTA TG TGGCTT TGTTGAAA TG GAAGAT GATCCTG G A ATTTTCA AG AAATAT TGGTGATT A TGGTGAT TA TGGTGA TGGTGATT A TGGTGAT TA TGGTGA GG CTCTTT TATCTGG C TA TGTTGT AT TCCTAC TG TTCAGT GAGTGTG T CC ATCTTC ATGTTTGT T ATGTTTG GT ATGTTT CA CTTTGA CC GTTTTG AA GAAATA TAAAGAA G TAAAGAA G GT GCATTG TG CTGGGA A TCTTTTA GA TCTTTT CT ATCCTT TC TATTGT T TGATTGT GT TGATTG GT AAACCC CTTATGT A GT AAACCC GA AAATTA TTTTTGA A TTTTTTGA TC TTTCTT TC AGTTTT CT AATCCA CATCCAG T TG CTAAAC GG GGAAAA GAGACTAT GT GAGACT TG ACCTCG TG ACCTCG TG ATGGAG TA TGTTGA GC ATTTTA GTTAGGGA T GTTAGGG GT GTTAGG T GTTAGGG GT GTTAGG GTTAGGGA T GTTAGGG GT GTTAGG GT TGGATC TA AAGACT TA AAGACT TA AAGACT TT CGTCGT T AGTTTGA CT TTTTGG TT AATTGA AT CATTTG AT TTGTTA GC AGTTTT AG ATACTT TC TTCTTT TT ACAGTC GC AAGTTG AT GATCTT TA TGTAGA AT AGTGTT TA TTTTGT TA TTTTGT GC TGGTTC TA ACAGAC AG TTGAAC AG TTGAAC G TTGAACA AG TTGAAC CT ATGAGC AA GATTTG GT GGATTT TTGCTGT G T CTGTAAA T GGTTGTT TG TAATTG AAAGACG G TT GGAAAT CG TTTCGA TA AATCAG TA AATCAG CG AATTAT GT TTTTCT TG TTTTTA TA GATAGT C GTGTTTG TC GTGTTT TG AGTGTT AT ATTTGT TG GAAGAG GG GTTGGG TT TGCTTC TT TGCTTC TG ATTAGC TA GTGAAA CG CTGTTC T CATACCT GT ACTTTA TG CATAAG TC CCACCC TT AAGATT GGTGAAA T CC AGAAGA TT CTAGAT A AACTTTA CC TTTGTC TA AATAAA TC TGTTCT C AAACGAT TCTCTTTA GT TCTCTT CT GAGTTA GG GGCTCT GTATTGG G AG TAGCTT TT TTTTTG TG TGTTCA TT TTGTCT GTGGTCAA GA GATTTT AC GGGGAA TC GTCTAA TG TTTACT TC TGTAGC GTGTTTC T GC CAACCA CG ATGATG AG TGGAAG TC GATGAG AA TCAAAG TT TCTATG A TGCTGTG TA TGCTGT T TTGAAGT TT TTGAAG AT GAGTGT AT ATTTGC GGACAT AT C GTATCTG AC GTATCT C GTATCTG AC GTATCT GA CCACAT CCTGGGA C AT TTTCGA TT GCTTCT TC CGTGTG TC CGTGTG TT GCGACG TC TTGACA GA ATTATG G ATGTACC GT GAGTAC A GTTTATT AA GTTTAT CC AATAAT TG TGGATA TTCTTCTC TC CGTGTC CA AAAAAG CT ATATTT TT TTGACC TA TGTTGT TC AAAACA TT TCTTGT TTATTTCA TT TTATTT TT AGCTTT AC TATTAT TG AAGGGG TT TGATGC T CCGGTCA TTCTAGGC TT AAGCAT G TTCGAAG GA AAAGTT C TTTTTCC TT TTTAGT GG AATTGT CC AATTCT TAGCTGTG TT GGATTA TG AGCTGG GG CTTGTT TGTTAGGG TT TTTGGA AA TGTATA AT CTTGGA GACAAT CT CT TGTCAC TT TTTCAT GAAAGGGT AA CATATT AA CATATT TGAAAGAA GC AACTCT CT TGCTAG ATGAAGGC GT CTGTCT AT TCTTCA TA ACCTCC TTGTTCT A TTTCTCC G CCAAAGAT CT TTGCTT T GTTACTA TG TCTTCA GG TGATAC GT TGTGCC AA TATACA AAGGGTG G TA GCTCTT TA GCTCTT AG GGATTT TT AAAACT AT CAATAA TT AAAGTA AA AAGCAT GA TTGGCT T CAACACA AA TAGATA AC CGTTTT GT ATTGTT AA TTTGGA GT TTGGAA CG AGACAC AA TCTTCT AT TTTTTC TC TCCTTT TC TCCTTT TC TCCTTT TC TCCTTT CG TATATT AG TCTTTC GT TCAGTA CG TCATCT GCTTATGT TT TTTTCT AAGCTTCT TT ATGGGA TC CCCTTG TT GAGCTC AA TGTGTT TTTGAAAC GT TTATTG GA GTATCT GATGTTC G GT AAGTTA TT AACCAG AT GTATGA GT TAAATT AT TCTGTA AT TCTGTA G TTCGGAA CC AAAATG G GTTTTGC GT ATGATT AA ACAAAA CATGTAC T CT CAGTTT TTTTCACT TTGAACA T TT GTTTCC AA TTTTTT ACAGTCT C TG CTGTTG TG CTGTTG TTTTGG TT A GTGAGAC GA TTTAAA TG GAAGTT 131 -58 63 -1267 180 -1267 -37 -307 110 118 -110 -1267 135 42 -1267 -120 -131 230 -1267 -1267 -290 -58 -269 107 -1267 -1267 -1267 136 -1267 -1267 -1267 136 -73 -99 183 -266 -390 74 -1267 80 42 -358 48 4 75 -126 -52 4 0.569231 0.123077 0.307692 0.000000 0.800000 0.000000 0.153846 0.046154 0.492308 0.415385 0.092308 0.000000 0.584615 0.246154 0.000000 0.169231 0.092308 0.907692 0.000000 0.000000 0.030769 0.123077 0.030769 0.815385 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.138462 0.092308 0.707692 0.061538 0.015385 0.307692 0.000000 0.676923 0.307692 0.015385 0.276923 0.400000 0.384615 0.076923 0.138462 0.400000 [AG]A[AC][AC]CUUUG[UC][UAG][UA] TAA CGCTT GAA GTAAA GTT GATCA GTT GATCA GTT GAATG GTT GAATG AGT TATTT TGA CGAAA ACC ATTTC TTA TGTAG CAC TCAAG TTA GTGTT TAA AGATT TTG TTGTG CCA CTTTC TAC TTTGA CAT TATAG TTT GCAAA TTT TATTT CTG TGCAC ATA AGGAA GTG AGAGT GGA GTATG GAA TCATT AA CTTGCT AAA CTTGC TG CACCTT ATG CACCT ACA CAGTG AAT TGATA TGA ATTTA GA AACATC TGA TTACA TAA ATTCC CGA CTCTC TAAAGCTA AAC TAAAG AGG CAGAG TCT TTCAG CC AGATCA GTG TTGAC AAG CTCGC TGA GTAGT AAA TGAAG AAC CTTTC AGC CTGTT TCG CGTTG AGA ACCAG AAA TTGGT GTT TTGCT CAAA TTCT CAA CTTTG TCT CTTTA CGA TGAGG CAA ATTTT CT GAAGAA CCT GAAGA TA GAGAGT GTA ATGGT GTA ATGGT CAT AATGA ACT TTTTT TTG TTGCC TAA CGAAA A GTTTTCT -38 -1073 -1073 108 -1073 -6 57 45 84 116 -1073 -114 184 -1073 -175 -172 -1073 -1073 233 -1073 212 -1073 -1073 -1073 -1073 244 -1073 -1073 174 -64 -1073 -172 -1073 -1073 -1073 136 -1073 -1073 233 -1073 -1073 182 -1073 -14 -1073 -1073 -75 118 0.176471 0.000000 0.000000 0.823529 0.000000 0.176471 0.294118 0.529412 0.411765 0.411765 0.000000 0.176471 0.823529 0.000000 0.058824 0.117647 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.764706 0.117647 0.000000 0.117647 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.647059 0.000000 0.352941 0.000000 0.000000 0.117647 0.882353 U[UG][AC]AGACAUG[CU]U T ACTAAGT TTTCCTCT T ACTAAGT TTTCCTCT T ACTAAGT C TCATTGG CTTGTGGT CTTGTGGT A TGCCATA A TGCCATA A TCTGGCA G TGTATTT TT TTTTTA GGTCGTGT A AGTGGTC A TACTGAA TC CTCATA -1097 12 201 -1097 12 71 -1097 21 -1097 229 -1097 -196 -1097 93 82 -37 -1097 -1097 -1097 136 -220 158 -1097 4 -1097 -1097 226 -295 139 -1097 -99 -37 97 158 -1097 -1097 112 12 60 -1097 -1097 244 -1097 -1097 -120 203 -40 -1097 0.000000 0.200000 0.800000 0.000000 0.250000 0.300000 0.000000 0.450000 0.000000 0.900000 0.000000 0.100000 0.000000 0.350000 0.350000 0.300000 0.000000 0.000000 0.000000 1.000000 0.050000 0.550000 0.000000 0.400000 0.000000 0.000000 0.950000 0.050000 0.600000 0.000000 0.100000 0.300000 0.450000 0.550000 0.000000 0.000000 0.500000 0.200000 0.300000 0.000000 0.000000 1.000000 0.000000 0.000000 0.100000 0.750000 0.150000 0.000000 [GC][UCA]C[CGU]U[CU]G[AU][CA][AGC]CC GTTGT TGC TTGAT ATG TCTGT CGG GT GTCCAT TCTCA TCT TGTGTTTC CCGTT AAG ATGTT ATT CTCTC ATA TTGTG TAA GG ACCCCT GTCGG ACC CAGAC GCC TATGGA CA TAGAA GTC CTTTA CTC TTGAT CGA CTCTT ATC CCGA CATC AGGTGGA T 73 175 -1262 -1262 61 55 -1262 -3 -1262 64 -32 52 -68 -36 -84 64 -1262 -121 -1262 125 -1262 -121 221 -1262 90 -7 -1262 3 -1262 5 -1262 106 -1262 -153 -1262 127 -1262 -1262 -1262 136 79 -53 -264 19 -1262 164 111 -1262 0.380952 0.619048 0.000000 0.000000 0.349206 0.269841 0.000000 0.380952 0.000000 0.285714 0.158730 0.555556 0.142857 0.142857 0.111111 0.603175 0.000000 0.079365 0.000000 0.920635 0.000000 0.079365 0.920635 0.000000 0.428571 0.174603 0.000000 0.396825 0.000000 0.190476 0.000000 0.809524 0.000000 0.063492 0.000000 0.936508 0.000000 0.000000 0.000000 1.000000 0.396825 0.126984 0.031746 0.444444 0.000000 0.571429 0.428571 0.000000 [CA][UAC][UC]UUG[AU]UUU[UA][CG] CGAGTA TG TCGAGTA T C CTGCACC A CAGTTCC ATGATATG ATGATATG A CTCGGTT T AGAAACT T CGCTTCT TGCTTTTT TGCTTTTT A CTGCACC G GGTTCAT TAATCA AG TAATCA AG A TCTGCTG TTGGTG TC CCCTC TTC TATATGAA TAATGA TA GTAATGA T GCAAAA AT AATGAAAG TGTGGT AA AACTAAGA TGGAAGCC TGTAGTCA GTATGCG T TGTATGCG CCTGGG TA TC GGCACT TGACTC GG T ACGAATA TTTTGTCT T AACTCTT A TTTGCAG AATTATGA TTGGCTCC A CTAATGC A CTAATGC A CTGAGAA G CGTTCCA CTTGGGGC T CTTGGGG C CTCGGGA ACTCAATA TCTTAT GA TATTGTGG GTTTCT CA A TGGAGAT AATTTGTT TCATTGTT CT TCATTG T GGGATTG GGTCAGGA GACCTC CT T CCGTTGC T CTGCAGC TCTCAAAT GTTTAAAC CACCG CTG T TGATATA C GCTGACT