]> meme /global/cfs/cdirs/usa/custom/mmingay/rna_mods_cfs/jaws_output/misc_analysis/meme_output//brassicaBolPbioRef_root_GMM3logit05_mods_pad10_anno.fasta -oc /global/cfs/cdirs/usa/custom/mmingay/rna_mods_cfs/jaws_output/misc_analysis/meme_output/meme_out_brassicaBolPbioRef_root_GMM3logit05_pad10_width15/ -rna -maxsize 10000000 -brief 100000 -mod zoops -nmotifs 5 -minw 2 -maxw 15 -mpi default-f66c9102-56d3-4bf5-9398-99ad70a926c6 zoops 5 inf E-value of product of p-values E-value of product of p-values 2 15 11 1 yes yes 2 947 0.8 uni 0.5 dirichlet 0.01 50 1e-05 18899 0 0 18899 10000000 no 1000 none 100000 Stopped because requested number of motifs (5) found. 0.282 0.193 0.197 0.328 -50 -95 27 49 30 31 -187 14 -55 -148 -22 80 -203 0 -9 76 -95 -74 27 61 -87 -48 -109 91 -95 -33 -29 72 23 16 53 -95 160 -1367 -109 -261 53 -465 157 -1367 183 -1367 -1367 -1367 -320 233 -1367 -1367 45 -148 -368 69 -15 -265 -1367 113 -320 -119 -16 111 0.200000 0.100000 0.238462 0.461538 0.346154 0.238462 0.053846 0.361538 0.192308 0.069231 0.169231 0.569231 0.069231 0.192308 0.184615 0.553846 0.146154 0.115385 0.238462 0.500000 0.153846 0.138462 0.092308 0.615385 0.146154 0.153846 0.161538 0.538462 0.330769 0.215385 0.284615 0.169231 0.853846 0.000000 0.092308 0.053846 0.407692 0.007692 0.584615 0.000000 1.000000 0.000000 0.000000 0.000000 0.030769 0.969231 0.000000 0.000000 0.384615 0.069231 0.015385 0.530769 0.253846 0.030769 0.000000 0.715385 0.030769 0.084615 0.176923 0.707692 [UGA][UAC]UU[UG]UU[AGC]A[GA]AC[UA][UA]U A TTTT CA TTT CCCAT A TCTG AAACT AA AAA G GTTT TG GTT CA ACA AT TTT CT GAA TGTGG G TGTG TG TGT T TTTT T GTTG GGT GT TT ATG CA GTT G TTTT AT GTC CT CAG GCT CA GT GTT C AAGA AA TCT GA TTA A GGAT CA GGA AT CCT AA CAA T AGAT C CTCT C TTGT A TTGT AGA TT TG CTA GC GAT A GATT A AAAC TA AAA TT AGC T AGAA T TTAT TT TTC GTACT TA GTA T ATGT CTCTT G TGAA GT TGG TG GTC G ATAA TG ATA GTTG A CT TTT AC CAT CT TAG T GTTT TT GTT TTT GT TG CTA C TTAT TC CAT A CATA GA CAT G AAGA TAG AA TT ACA A TGTC TCCTT GA GAC TGGCG A TGGC CA TGG ATCA T TATCA T TACT A AATT T TCTG T ATTA CTT AT TT AAT A TTGT AT CTT AAT CA AC AAA TAC AA T TCTG CT TGT T TTAG GAA GC AG ACA AT CTC TGT AT GA AAT TT TTT CT TGT TA AAA TT GTG TG ATT A GTTT GTT AT TT AAA T GATC AC AAA T GCGT C TGCA TC TGC TGA CT AC TCT T ATAA TT TTT C TACT A ATGG TG TTT GAT AC A GAAA AA GAA TCTTT T TCTT A TCAA TTA TC T GTTT GTGAA T GTGA T TTAG AATCC A TATT ATACA -1110 161 -211 15 69 -1110 69 -53 -1110 -1110 -1110 161 -163 -1110 220 -1110 -163 -1110 -53 124 -1110 50 21 61 161 -1110 -1110 -127 -1110 -1110 -1110 161 -1110 -108 220 -1110 -1110 91 -1110 96 17 -1110 -112 85 154 -1110 -112 -185 -1110 -1110 -1110 161 -1110 -1110 234 -1110 -1110 108 69 -27 0.000000 0.590909 0.045455 0.363636 0.454545 0.000000 0.318182 0.227273 0.000000 0.000000 0.000000 1.000000 0.090909 0.000000 0.909091 0.000000 0.090909 0.000000 0.136364 0.772727 0.000000 0.272727 0.227273 0.500000 0.863636 0.000000 0.000000 0.136364 0.000000 0.000000 0.000000 1.000000 0.000000 0.090909 0.909091 0.000000 0.000000 0.363636 0.000000 0.636364 0.318182 0.000000 0.090909 0.590909 0.818182 0.000000 0.090909 0.090909 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.409091 0.318182 0.272727 [CU][AGU]UGU[UCG]AUG[UC][UA]AUG[CGU] ATGTT GT ATG TGT AT ATGTT TG ATG ATG AT CTATG T TATG GT TAT TTTTA G TTTT GG TTT ATGG T CATGG AT TTA TAAAA AA TAT AAGAA TCCA C CTCCA T TGAA CGT TG -249 -1197 2 119 50 -1197 -1197 87 83 -1197 -139 37 -33 -1197 154 -71 41 114 -1197 -71 120 -1197 -198 -13 75 -95 -1197 37 131 -1197 -1197 -13 109 -63 -1197 -25 136 51 -1197 -1197 183 -1197 -1197 -1197 183 -1197 -1197 -1197 150 -195 -1197 -113 159 -136 -139 -1197 163 -1197 -1197 -139 0.050000 0.000000 0.200000 0.750000 0.400000 0.000000 0.000000 0.600000 0.500000 0.000000 0.075000 0.425000 0.225000 0.000000 0.575000 0.200000 0.375000 0.425000 0.000000 0.200000 0.650000 0.000000 0.050000 0.300000 0.475000 0.100000 0.000000 0.425000 0.700000 0.000000 0.000000 0.300000 0.600000 0.125000 0.000000 0.275000 0.725000 0.275000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.050000 0.000000 0.150000 0.850000 0.075000 0.075000 0.000000 0.875000 0.000000 0.000000 0.125000 [UG][UA][AU][GAU][CAU][AU][AU][AU][AU][AC]AAAAA AAAAA CT ACT AACT CAACT TC AAAA TC AAA TTC AA TTTC A TTTTC CTTT A TTG AA T AAAA TCT AA GCGGA T GCGG TT GCG GTT GC GAGTT GTTTC AT TAT GTT AT TTA CA GTTA C TCATC GT TCA T TTCC TTG TA GTGTA GTG GT TGTG G AGAAG GAG AG CA TCT CT AGA TTTCT GGTAT GTAAT -1097 -36 211 -1097 -1097 -1097 161 29 -1097 222 -1097 -171 159 -95 -1097 -271 120 -1097 -1097 9 -91 196 -98 -1097 -17 -1097 193 -1097 120 -1097 83 -1097 120 -1097 83 -1097 31 -1097 -1097 99 109 -95 61 -1097 -249 -1097 2 119 -1097 -36 -1097 137 -1097 -1097 -1097 161 -1097 137 -1097 61 0.000000 0.150000 0.850000 0.000000 0.000000 0.000000 0.600000 0.400000 0.000000 0.900000 0.000000 0.100000 0.850000 0.100000 0.000000 0.050000 0.650000 0.000000 0.000000 0.350000 0.150000 0.750000 0.100000 0.000000 0.250000 0.000000 0.750000 0.000000 0.650000 0.000000 0.350000 0.000000 0.650000 0.000000 0.350000 0.000000 0.350000 0.000000 0.000000 0.650000 0.600000 0.100000 0.300000 0.000000 0.050000 0.000000 0.200000 0.750000 0.000000 0.150000 0.000000 0.850000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 G[GU]CA[AU]C[GA][AG][AG][UA][AG][UG]UU[CU] CTC GG C GGCT TC GGC CTTGG A CTTG GGA CT AGGA C GAGAA GT GAG CGT GA GCGT G TCTTA A TCTT G CGAC GTG CG T ATCT AGGA T TCAT C T TATG GCGT T -269 -1117 228 -1117 130 -1117 63 -1117 -269 -115 -218 133 -1117 85 173 -1117 130 -1117 14 -191 147 17 -1117 -1117 -1117 66 182 -1117 183 -1117 -1117 -1117 183 -1117 -1117 -1117 -1117 85 173 -1117 -170 -115 207 -1117 0.043478 0.000000 0.956522 0.000000 0.695652 0.000000 0.304348 0.000000 0.043478 0.086957 0.043478 0.826087 0.000000 0.347826 0.652174 0.000000 0.695652 0.000000 0.217391 0.086957 0.782609 0.217391 0.000000 0.000000 0.000000 0.304348 0.695652 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.347826 0.652174 0.000000 0.086957 0.086957 0.826087 0.000000 G[AG]U[GC][AG][AC][GC]AA[GC]G ATC TAGCGA CATC TAGCG CATC TAGCG CGCATC TAG TCGCATC TA TCTCGCATC TAAGGA AGC GGTAAGGA A TGGTAAGGA A CCGCAGTG AA CCGCAGT TGCCAA CCG CGGTGCCAA TTTCAAGAA GATCAC TGA A GGTCCTTC GA GGTCCTT ATCAA GCGG CAATCAA GC CAA CAAGCT AAGGCCGC G TCCCGCCGC GGTTTGGTC