]> meme /global/cfs/cdirs/usa/custom/mmingay/rna_mods_cfs/jaws_output/misc_analysis/meme_output//brassicaBolPbioRef_root_GMM3logit05_mods_pad8_anno.fasta -oc /global/cfs/cdirs/usa/custom/mmingay/rna_mods_cfs/jaws_output/misc_analysis/meme_output/meme_out_brassicaBolPbioRef_root_GMM3logit05_pad8_width15/ -rna -maxsize 10000000 -brief 100000 -mod zoops -nmotifs 5 -minw 2 -maxw 15 -mpi default-f66c9102-56d3-4bf5-9398-99ad70a926c6 zoops 5 inf E-value of product of p-values E-value of product of p-values 2 15 11 1 yes yes 2 947 0.8 uni 0.5 dirichlet 0.01 50 1e-05 15130 0 0 15130 10000000 no 1000 none 100000 Stopped because requested number of motifs (5) found. 0.287 0.195 0.189 0.328 33 25 -150 6 -35 -109 0 59 -124 0 -5 61 -65 -24 -43 64 -80 -48 -63 80 -39 -68 -10 55 44 -5 37 -89 140 -500 -5 -258 55 -300 147 -343 178 -1400 -1400 -475 -323 231 -1400 -1400 -10 -75 -215 80 -27 -119 -495 103 -186 -83 -15 96 -51 -36 17 40 0.359756 0.231707 0.067073 0.341463 0.225610 0.091463 0.189024 0.493902 0.121951 0.195122 0.182927 0.500000 0.182927 0.164634 0.140244 0.512195 0.164634 0.140244 0.121951 0.573171 0.219512 0.121951 0.176829 0.481707 0.390244 0.189024 0.243902 0.176829 0.756098 0.006098 0.182927 0.054878 0.420732 0.024390 0.524390 0.030488 0.987805 0.000000 0.000000 0.012195 0.030488 0.969512 0.000000 0.000000 0.268293 0.115854 0.042683 0.573171 0.237805 0.085366 0.006098 0.670732 0.079268 0.109756 0.170732 0.640244 0.201220 0.152439 0.213415 0.432927 [AUC][UA]UUU[UA][AG]A[GA]AC[UA][UA]U[UGA] T G C T T T A T A T T G G G A T A G A C T T A T C A C T T G T T A A T G G T A T C T T A G G T T G A T T T A A T A T C A G A T A G T A T T G T T T T A T T T G T A T C T A T C T A T C G C T A T C A A T T G G A G G C A C C G T A C T T A T G A A T A A A T A A T C A G A T C T T C T A C G C T A A G T A T G C A T T T T A C A T A A A -178 -1123 -1123 148 -1123 -1123 240 -1123 -1123 -1123 14 127 -1123 -23 14 93 174 -1123 -1123 -297 -178 -1123 -1123 148 -1123 9 206 -1123 -1123 -23 -1123 134 -46 -1123 -1123 127 180 -1123 -1123 -1123 -278 -1123 -1123 154 0.083333 0.000000 0.000000 0.916667 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.208333 0.791667 0.000000 0.166667 0.208333 0.625000 0.958333 0.000000 0.000000 0.041667 0.083333 0.000000 0.000000 0.916667 0.000000 0.208333 0.791667 0.000000 0.000000 0.166667 0.000000 0.833333 0.208333 0.000000 0.000000 0.791667 1.000000 0.000000 0.000000 0.000000 0.041667 0.000000 0.000000 0.958333 UG[UG][UG]AU[GC]U[UA]AU GTATG CA GTA GCA GT ATGCA A GCTA TA GCT GTTAA GCATG CA GCA TCA GC CTGTG GGTTT G GGTT TG GGT GGTG G TGGTG TTCCT TTCCT TA AAA AG TGC AGGAG TA GTT AGC AA TTAGC -284 -128 -24 113 -52 -228 -124 105 86 -1129 -124 28 -84 -228 76 55 48 71 -224 -45 62 -1129 -224 66 124 4 -1129 -145 162 -1129 -1129 -145 155 -128 -224 -303 180 -1129 -1129 -1129 180 -1129 -1129 -1129 180 -1129 -1129 -1129 148 -70 -124 -1129 148 -128 -66 -1129 162 -1129 -1129 -145 0.040000 0.080000 0.160000 0.720000 0.200000 0.040000 0.080000 0.680000 0.520000 0.000000 0.080000 0.400000 0.160000 0.040000 0.320000 0.480000 0.400000 0.320000 0.040000 0.240000 0.440000 0.000000 0.040000 0.520000 0.680000 0.200000 0.000000 0.120000 0.880000 0.000000 0.000000 0.120000 0.840000 0.080000 0.040000 0.040000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.120000 0.080000 0.000000 0.800000 0.080000 0.120000 0.000000 0.880000 0.000000 0.000000 0.120000 U[UA][AU][UG][ACU][UA][AC]AAAAAAAA A G T A T C A T T T A C T A G T T T T G T A C -1089 92 132 -106 -1089 -1089 240 -1089 -1089 -1089 -1089 161 -1089 -1089 240 -1089 -1089 111 15 17 -1089 202 -1089 -64 55 -189 74 -64 -1089 157 -1089 36 -145 202 -1089 -164 125 69 -1089 -1089 180 -1089 -1089 -1089 0.000000 0.368421 0.473684 0.157895 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.421053 0.210526 0.368421 0.000000 0.789474 0.000000 0.210526 0.421053 0.052632 0.315789 0.210526 0.000000 0.578947 0.000000 0.421053 0.105263 0.789474 0.000000 0.105263 0.684211 0.315789 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 [GC]GUG[CUG][CU][AGU][CU]C[AC]A CACCT GTT GA TGTT G CTGTT G CTTC CAAG C CCAAG GGC CA GCGGC TC GGA CA ATG CCA AT TCCA A CTCCA TCGTC G TCGT AGTCA TC AGT GGT CA 180 -1081 -1081 -1081 154 -23 -1081 -1081 -1081 -1081 240 -1081 -1081 151 123 -1081 144 -181 -1081 -98 -1081 -1081 104 90 172 -1081 -177 -1081 -237 -23 -1081 124 -1081 236 -1081 -1081 109 -1081 -77 -24 109 100 -1081 -1081 1.000000 0.000000 0.000000 0.000000 0.833333 0.166667 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.555556 0.444444 0.000000 0.777778 0.055556 0.000000 0.166667 0.000000 0.000000 0.388889 0.611111 0.944444 0.000000 0.055556 0.000000 0.055556 0.166667 0.000000 0.777778 0.000000 1.000000 0.000000 0.000000 0.611111 0.000000 0.111111 0.277778 0.611111 0.388889 0.000000 0.000000 AAG[CG]A[UG]AUC[AU][AC] G TTCC TG TTC TAAGC T TAAG TT TAA GTTT T AGTTT T GAAG GT GAA CGGCA GCA GG GGCA G GTGCT CC GAA CC GGC GTGCC AACCT AGC CA