3300003272_6 - 17 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00007_3300003.. (original name was: 3300003272.a:Cyano_1000290)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	bacteriocin	9,517	19,738

c00019_3300003.. (original name was: 3300003272.a:Cyano_1000575)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	bacteriocin	47,992	58,270

c00037_3300003.. (original name was: 3300003272.a:Cyano_1000404)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	terpene	26,362	47,285

c00045_3300003.. (original name was: 3300003272.a:Cyano_1000219)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	bacteriocin	41,494	51,709

c00054_3300003.. (original name was: 3300003272.a:Cyano_1000322)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	NRPS	1	27,856

c00056_3300003.. (original name was: 3300003272.a:Cyano_1000957)

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	T1PKS	1	13,980

c00065_3300003.. (original name was: 3300003272.a:Cyano_1000501)

Region	Type	From	To	Most similar known cluster		Similarity
Region 65.1	terpene	201	21,871

c00080_3300003.. (original name was: 3300003272.a:Cyano_1000646)

Region	Type	From	To	Most similar known cluster		Similarity
Region 80.1	terpene	1	14,577

c00098_3300003.. (original name was: 3300003272.a:Cyano_1001197)

Region	Type	From	To	Most similar known cluster		Similarity
Region 98.1	T1PKS	1	10,194

c00106_3300003.. (original name was: 3300003272.a:Cyano_1000491)

Region	Type	From	To	Most similar known cluster		Similarity
Region 106.1	CDPS	13,412	30,286

c00110_3300003.. (original name was: 3300003272.a:Cyano_1001333)

Region	Type	From	To	Most similar known cluster		Similarity
Region 110.1	T3PKS	1	17,086

c00118_3300003.. (original name was: 3300003272.a:Cyano_1000256)

Region	Type	From	To	Most similar known cluster		Similarity
Region 118.1	T1PKS,NRPS	1	58,245

c00129_3300003.. (original name was: 3300003272.a:Cyano_1000196)

Region	Type	From	To	Most similar known cluster		Similarity
Region 129.1	NRPS	61,457	108,500

c00165_3300003.. (original name was: 3300003272.a:Cyano_1000737)

Region	Type	From	To	Most similar known cluster		Similarity
Region 165.1	NRPS,T1PKS	1	18,864

c00171_3300003.. (original name was: 3300003272.a:Cyano_1000301)

Region	Type	From	To	Most similar known cluster		Similarity
Region 171.1	terpene	1	13,595

c00176_3300003.. (original name was: 3300003272.a:Cyano_1000274)

Region	Type	From	To	Most similar known cluster		Similarity
Region 176.1	NRPS,T1PKS	1	52,548

c00180_3300003.. (original name was: 3300003272.a:Cyano_1000539)

Region	Type	From	To	Most similar known cluster		Similarity
Region 180.1	cyanobactin	1	21,109

Region	Type	From	To	Similarity
Region 7.1	bacteriocin	9,517	19,738
Region 19.1	bacteriocin	47,992	58,270
Region 37.1	terpene	26,362	47,285
Region 45.1	bacteriocin	41,494	51,709
Region 54.1	NRPS	1	27,856
Region 56.1	T1PKS	1	13,980
Region 65.1	terpene	201	21,871
Region 80.1	terpene	1	14,577
Region 98.1	T1PKS	1	10,194
Region 106.1	CDPS	13,412	30,286
Region 110.1	T3PKS	1	17,086
Region 118.1	T1PKS,NRPS	1	58,245
Region 129.1	NRPS	61,457	108,500
Region 165.1	NRPS,T1PKS	1	18,864
Region 171.1	terpene	1	13,595
Region 176.1	NRPS,T1PKS	1	52,548
Region 180.1	cyanobactin	1	21,109

No secondary metabolite regions were found in these records:: c00001_3300003.. (original name was: 3300003272.a:Cyano_1003208); c00002_3300003.. (original name was: 3300003272.a:Cyano_1003200); c00003_3300003.. (original name was: 3300003272.a:Cyano_1001277); c00004_3300003.. (original name was: 3300003272.a:Cyano_1000210); c00005_3300003.. (original name was: 3300003272.a:Cyano_1000923); c00006_3300003.. (original name was: 3300003272.a:Cyano_1000793); c00008_3300003.. (original name was: 3300003272.a:Cyano_1000808); c00009_3300003.. (original name was: 3300003272.a:Cyano_1001913); c00010_3300003.. (original name was: 3300003272.a:Cyano_1000296); c00011_3300003.. (original name was: 3300003272.a:Cyano_1001162); c00012_3300003.. (original name was: 3300003272.a:Cyano_1001357); c00013_3300003.. (original name was: 3300003272.a:Cyano_1000845); c00014_3300003.. (original name was: 3300003272.a:Cyano_1000497); c00015_3300003.. (original name was: 3300003272.a:Cyano_1001812); c00016_3300003.. (original name was: 3300003272.a:Cyano_1000260); c00017_3300003.. (original name was: 3300003272.a:Cyano_1000324); c00018_3300003.. (original name was: 3300003272.a:Cyano_1000862); c00020_3300003.. (original name was: 3300003272.a:Cyano_1000886); c00021_3300003.. (original name was: 3300003272.a:Cyano_1000871); c00022_3300003.. (original name was: 3300003272.a:Cyano_1001065); c00023_3300003.. (original name was: 3300003272.a:Cyano_1000677); c00024_3300003.. (original name was: 3300003272.a:Cyano_1003540); c00025_3300003.. (original name was: 3300003272.a:Cyano_1000356); c00026_3300003.. (original name was: 3300003272.a:Cyano_1001129); c00027_3300003.. (original name was: 3300003272.a:Cyano_1000396); c00028_3300003.. (original name was: 3300003272.a:Cyano_1000570); c00029_3300003.. (original name was: 3300003272.a:Cyano_1000452); c00030_3300003.. (original name was: 3300003272.a:Cyano_1000605); c00031_3300003.. (original name was: 3300003272.a:Cyano_1000451); c00032_3300003.. (original name was: 3300003272.a:Cyano_1000193); c00033_3300003.. (original name was: 3300003272.a:Cyano_1000985); c00034_3300003.. (original name was: 3300003272.a:Cyano_1001382); c00035_3300003.. (original name was: 3300003272.a:Cyano_1000507); c00036_3300003.. (original name was: 3300003272.a:Cyano_1000786); c00038_3300003.. (original name was: 3300003272.a:Cyano_1000358); c00039_3300003.. (original name was: 3300003272.a:Cyano_1001529); c00040_3300003.. (original name was: 3300003272.a:Cyano_1000426); c00041_3300003.. (original name was: 3300003272.a:Cyano_1003407); c00042_3300003.. (original name was: 3300003272.a:Cyano_1000620); c00043_3300003.. (original name was: 3300003272.a:Cyano_1000533); c00044_3300003.. (original name was: 3300003272.a:Cyano_1000308); c00046_3300003.. (original name was: 3300003272.a:Cyano_1000617); c00047_3300003.. (original name was: 3300003272.a:Cyano_1000372); c00048_3300003.. (original name was: 3300003272.a:Cyano_1000630); c00049_3300003.. (original name was: 3300003272.a:Cyano_1000466); c00050_3300003.. (original name was: 3300003272.a:Cyano_1000724); c00051_3300003.. (original name was: 3300003272.a:Cyano_1000714); c00052_3300003.. (original name was: 3300003272.a:Cyano_1000527); c00053_3300003.. (original name was: 3300003272.a:Cyano_1000745); c00055_3300003.. (original name was: 3300003272.a:Cyano_1001777); c00057_3300003.. (original name was: 3300003272.a:Cyano_1000185); c00058_3300003.. (original name was: 3300003272.a:Cyano_1000851); c00059_3300003.. (original name was: 3300003272.a:Cyano_1000429); c00060_3300003.. (original name was: 3300003272.a:Cyano_1000941); c00061_3300003.. (original name was: 3300003272.a:Cyano_1000407); c00062_3300003.. (original name was: 3300003272.a:Cyano_1000412); c00063_3300003.. (original name was: 3300003272.a:Cyano_1000607); c00064_3300003.. (original name was: 3300003272.a:Cyano_1000409); c00066_3300003.. (original name was: 3300003272.a:Cyano_1000656); c00067_3300003.. (original name was: 3300003272.a:Cyano_1003811); c00068_3300003.. (original name was: 3300003272.a:Cyano_1000229); c00069_3300003.. (original name was: 3300003272.a:Cyano_1001081); c00070_3300003.. (original name was: 3300003272.a:Cyano_1000305); c00071_3300003.. (original name was: 3300003272.a:Cyano_1000685); c00072_3300003.. (original name was: 3300003272.a:Cyano_1003096); c00073_3300003.. (original name was: 3300003272.a:Cyano_1000574); c00074_3300003.. (original name was: 3300003272.a:Cyano_1000642); c00075_3300003.. (original name was: 3300003272.a:Cyano_1001163); c00076_3300003.. (original name was: 3300003272.a:Cyano_1001487); c00077_3300003.. (original name was: 3300003272.a:Cyano_1000510); c00078_3300003.. (original name was: 3300003272.a:Cyano_1000885); c00079_3300003.. (original name was: 3300003272.a:Cyano_1001020); c00081_3300003.. (original name was: 3300003272.a:Cyano_1001505); c00082_3300003.. (original name was: 3300003272.a:Cyano_1000334); c00083_3300003.. (original name was: 3300003272.a:Cyano_1001046); c00084_3300003.. (original name was: 3300003272.a:Cyano_1000351); c00085_3300003.. (original name was: 3300003272.a:Cyano_1001171); c00086_3300003.. (original name was: 3300003272.a:Cyano_1001725); c00087_3300003.. (original name was: 3300003272.a:Cyano_1002520); c00088_3300003.. (original name was: 3300003272.a:Cyano_1000531); c00089_3300003.. (original name was: 3300003272.a:Cyano_1000626); c00090_3300003.. (original name was: 3300003272.a:Cyano_1001000); c00091_3300003.. (original name was: 3300003272.a:Cyano_1000612); c00092_3300003.. (original name was: 3300003272.a:Cyano_1000381); c00093_3300003.. (original name was: 3300003272.a:Cyano_1001949); c00094_3300003.. (original name was: 3300003272.a:Cyano_1000751); c00095_3300003.. (original name was: 3300003272.a:Cyano_1000774); c00096_3300003.. (original name was: 3300003272.a:Cyano_1000352); c00097_3300003.. (original name was: 3300003272.a:Cyano_1003186); c00099_3300003.. (original name was: 3300003272.a:Cyano_1001969); c00100_3300003.. (original name was: 3300003272.a:Cyano_1000522); c00101_3300003.. (original name was: 3300003272.a:Cyano_1002138); c00102_3300003.. (original name was: 3300003272.a:Cyano_1000456); c00103_3300003.. (original name was: 3300003272.a:Cyano_1000625); c00104_3300003.. (original name was: 3300003272.a:Cyano_1000648); c00105_3300003.. (original name was: 3300003272.a:Cyano_1000555); c00107_3300003.. (original name was: 3300003272.a:Cyano_1000589); c00108_3300003.. (original name was: 3300003272.a:Cyano_1000166); c00109_3300003.. (original name was: 3300003272.a:Cyano_1000934); c00111_3300003.. (original name was: 3300003272.a:Cyano_1001609); c00112_3300003.. (original name was: 3300003272.a:Cyano_1000639); c00113_3300003.. (original name was: 3300003272.a:Cyano_1000735); c00114_3300003.. (original name was: 3300003272.a:Cyano_1000758); c00115_3300003.. (original name was: 3300003272.a:Cyano_1001218); c00116_3300003.. (original name was: 3300003272.a:Cyano_1004800); c00117_3300003.. (original name was: 3300003272.a:Cyano_1000984); c00119_3300003.. (original name was: 3300003272.a:Cyano_1001076); c00120_3300003.. (original name was: 3300003272.a:Cyano_1000435); c00121_3300003.. (original name was: 3300003272.a:Cyano_1000887); c00122_3300003.. (original name was: 3300003272.a:Cyano_1000343); c00123_3300003.. (original name was: 3300003272.a:Cyano_1000194); c00124_3300003.. (original name was: 3300003272.a:Cyano_1000990); c00125_3300003.. (original name was: 3300003272.a:Cyano_1000983); c00126_3300003.. (original name was: 3300003272.a:Cyano_1000560); c00127_3300003.. (original name was: 3300003272.a:Cyano_1000585); c00128_3300003.. (original name was: 3300003272.a:Cyano_1000594); c00130_3300003.. (original name was: 3300003272.a:Cyano_1000515); c00131_3300003.. (original name was: 3300003272.a:Cyano_1000141); c00132_3300003.. (original name was: 3300003272.a:Cyano_1001310); c00133_3300003.. (original name was: 3300003272.a:Cyano_1000790); c00134_3300003.. (original name was: 3300003272.a:Cyano_1002407); c00135_3300003.. (original name was: 3300003272.a:Cyano_1000262); c00136_3300003.. (original name was: 3300003272.a:Cyano_1000602); c00137_3300003.. (original name was: 3300003272.a:Cyano_1000579); c00138_3300003.. (original name was: 3300003272.a:Cyano_1001549); c00139_3300003.. (original name was: 3300003272.a:Cyano_1001167); c00140_3300003.. (original name was: 3300003272.a:Cyano_1000792); c00141_3300003.. (original name was: 3300003272.a:Cyano_1001231); c00142_3300003.. (original name was: 3300003272.a:Cyano_1000857); c00143_3300003.. (original name was: 3300003272.a:Cyano_1000241); c00144_3300003.. (original name was: 3300003272.a:Cyano_1000662); c00145_3300003.. (original name was: 3300003272.a:Cyano_1001534); c00146_3300003.. (original name was: 3300003272.a:Cyano_1002708); c00147_3300003.. (original name was: 3300003272.a:Cyano_1002311); c00148_3300003.. (original name was: 3300003272.a:Cyano_1002090); c00149_3300003.. (original name was: 3300003272.a:Cyano_1002885); c00150_3300003.. (original name was: 3300003272.a:Cyano_1000892); c00151_3300003.. (original name was: 3300003272.a:Cyano_1000504); c00152_3300003.. (original name was: 3300003272.a:Cyano_1000698); c00153_3300003.. (original name was: 3300003272.a:Cyano_1002843); c00154_3300003.. (original name was: 3300003272.a:Cyano_1001200); c00155_3300003.. (original name was: 3300003272.a:Cyano_1001818); c00156_3300003.. (original name was: 3300003272.a:Cyano_1001233); c00157_3300003.. (original name was: 3300003272.a:Cyano_1000460); c00158_3300003.. (original name was: 3300003272.a:Cyano_1002453); c00159_3300003.. (original name was: 3300003272.a:Cyano_1001587); c00160_3300003.. (original name was: 3300003272.a:Cyano_1000815); c00161_3300003.. (original name was: 3300003272.a:Cyano_1002886); c00162_3300003.. (original name was: 3300003272.a:Cyano_1000354); c00163_3300003.. (original name was: 3300003272.a:Cyano_1000728); c00164_3300003.. (original name was: 3300003272.a:Cyano_1000752); c00166_3300003.. (original name was: 3300003272.a:Cyano_1002670); c00167_3300003.. (original name was: 3300003272.a:Cyano_1000573); c00168_3300003.. (original name was: 3300003272.a:Cyano_1002209); c00169_3300003.. (original name was: 3300003272.a:Cyano_1001264); c00170_3300003.. (original name was: 3300003272.a:Cyano_1000867); c00172_3300003.. (original name was: 3300003272.a:Cyano_1001471); c00173_3300003.. (original name was: 3300003272.a:Cyano_1001063); c00174_3300003.. (original name was: 3300003272.a:Cyano_1002913); c00175_3300003.. (original name was: 3300003272.a:Cyano_1001321); c00177_3300003.. (original name was: 3300003272.a:Cyano_1001071); c00178_3300003.. (original name was: 3300003272.a:Cyano_1000760); c00179_3300003.. (original name was: 3300003272.a:Cyano_1000785); c00181_3300003.. (original name was: 3300003272.a:Cyano_1000937); c00182_3300003.. (original name was: 3300003272.a:Cyano_1003593); c00183_3300003.. (original name was: 3300003272.a:Cyano_1000384); c00184_3300003.. (original name was: 3300003272.a:Cyano_1000806); c00185_3300003.. (original name was: 3300003272.a:Cyano_1002335); c00186_3300003.. (original name was: 3300003272.a:Cyano_1000780)

Compact view

c00007_3300003.. - Region 1 - bacteriocin

Download region GenBank file

Location: 9,517 - 19,738 nt. (total: 10,222 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00019_3300003.. - Region 1 - bacteriocin

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Location: 47,992 - 58,270 nt. (total: 10,279 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00037_3300003.. - Region 1 - terpene

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Location: 26,362 - 47,285 nt. (total: 20,924 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00045_3300003.. - Region 1 - bacteriocin

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Location: 41,494 - 51,709 nt. (total: 10,216 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00054_3300003.. - Region 1 - NRPS

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Location: 1 - 27,856 nt. (total: 27,856 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27856:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - gln)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg54_3

Search NORINE for peptide: strict or relaxed

AMP-binding (409..818): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: sArDLtlgtK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 40% (weak)

AMP-binding (1487..1886): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDLGVVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 100% (strong)

c00056_3300003.. - Region 1 - T1PKS

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Location: 1 - 13,980 nt. (total: 13,980 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00065_3300003.. - Region 1 - terpene

Download region GenBank file

Location: 201 - 21,871 nt. (total: 21,671 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

c00080_3300003.. - Region 1 - terpene

Download region GenBank file

Location: 1 - 14,577 nt. (total: 14,577 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

c00098_3300003.. - Region 1 - T1PKS

Download region GenBank file

Location: 1 - 10,194 nt. (total: 10,194 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

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NRPS/PKS domains

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c00106_3300003.. - Region 1 - CDPS

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Location: 13,412 - 30,286 nt. (total: 16,875 nt) Show pHMM detection rules used

Region on contig edge.

CDPS: (CDPS or cycdipepsynth)

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c00110_3300003.. - Region 1 - T3PKS

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Location: 1 - 17,086 nt. (total: 17,086 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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c00118_3300003.. - Region 1 - NRPS,T1PKS

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Location: 1 - 58,245 nt. (total: 58,245 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 58245:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal) + (ohmal) + (ohmal) + (ohmal) + (D-leu)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg118_8

PKS_AT (555..852): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 95.8%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 199.3
inactive: 192.8
Methoxymalonyl-CoA: 64.9
Methylmalonyl-CoA: 58.8
Propionyl-CoA: 40.2
Isobutyryl-CoA: 35.2
Ethylmalonyl-CoA: 24.6
2-Methylbutyryl-CoA: 22.8
Benzoyl-CoA: 18.0
3-Methylbutyryl-CoA: 17.9
CHC-CoA: 13.6
trans-1,2-CPDA: 10.3
Acetyl-CoA: 9.8
fatty_acid: 0.0

ctg118_9

PKS_AT (568..866): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 195.5
inactive: 176.3
Methoxymalonyl-CoA: 74.2
Methylmalonyl-CoA: 63.6
Isobutyryl-CoA: 34.9
Propionyl-CoA: 30.9
Benzoyl-CoA: 24.0
Ethylmalonyl-CoA: 22.8
Acetyl-CoA: 16.9
3-Methylbutyryl-CoA: 15.1
CHC-CoA: 12.0
2-Methylbutyryl-CoA: 11.9
trans-1,2-CPDA: 10.4
fatty_acid: 0.0

ctg118_10

PKS_AT (561..854): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 95.8%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 187.0
inactive: 180.6
Methoxymalonyl-CoA: 48.9
Methylmalonyl-CoA: 45.3
Propionyl-CoA: 29.3
Isobutyryl-CoA: 23.9
2-Methylbutyryl-CoA: 22.5
Benzoyl-CoA: 17.6
Acetyl-CoA: 15.6
CHC-CoA: 11.6
trans-1,2-CPDA: 10.2
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg118_12

PKS_AT (576..871): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 207.0
inactive: 183.3
Methoxymalonyl-CoA: 66.2
Methylmalonyl-CoA: 64.8
Propionyl-CoA: 47.5
Isobutyryl-CoA: 40.6
Ethylmalonyl-CoA: 29.3
Benzoyl-CoA: 23.1
2-Methylbutyryl-CoA: 21.5
Acetyl-CoA: 15.0
trans-1,2-CPDA: 14.4
CHC-CoA: 14.0
3-Methylbutyryl-CoA: 6.8
fatty_acid: 0.0

ctg118_13

PKS_AT (568..865): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 95.8%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 205.3
inactive: 196.2
Methoxymalonyl-CoA: 81.1
Methylmalonyl-CoA: 68.2
Isobutyryl-CoA: 42.8
Benzoyl-CoA: 42.4
Ethylmalonyl-CoA: 37.4
Propionyl-CoA: 35.5
Acetyl-CoA: 31.9
3-Methylbutyryl-CoA: 23.8
CHC-CoA: 20.4
2-Methylbutyryl-CoA: 19.0
fatty_acid: 16.3
trans-1,2-CPDA: 14.3

ctg118_14

CAL_domain (810..1222): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 43.5
shikimic_acid: 0.0
NH2: 0.0
Acetyl-CoA: 0.0
AHBA: 0.0

ctg118_16

Search NORINE for peptide: strict or relaxed

AMP-binding (539..936): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAWFLGNVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 100% (strong)

c00129_3300003.. - Region 1 - NRPS

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Location: 61,457 - 108,500 nt. (total: 47,044 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 61456 - 108500:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg129_78

Search NORINE for peptide: strict or relaxed

AMP-binding (30..426): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVpSItlVwK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 60% (weak)

AMP-binding (1498..1902): asn

NRPSPredictor2: asn

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGhVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

c00165_3300003.. - Region 1 - NRPS,T1PKS

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Location: 1 - 18,864 nt. (total: 18,864 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

Detailed domain annotation

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Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 18864:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg165_1

PKS_AT (545..841): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 100.0%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 209.2
inactive: 208.3
Methoxymalonyl-CoA: 64.8
Methylmalonyl-CoA: 59.3
Isobutyryl-CoA: 34.6
Propionyl-CoA: 32.8
Ethylmalonyl-CoA: 18.8
2-Methylbutyryl-CoA: 14.3
3-Methylbutyryl-CoA: 13.3
Benzoyl-CoA: 11.3
Acetyl-CoA: 10.7
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
CHC-CoA: 0.0

ctg165_2

Search NORINE for peptide: strict or relaxed

AMP-binding (534..941): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

ctg165_3

PKS_AT (579..875): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 100.0%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: inactive

Prediction, score:

inactive: 221.2
Malonyl-CoA: 216.7
Methoxymalonyl-CoA: 70.5
Methylmalonyl-CoA: 64.6
Isobutyryl-CoA: 39.2
Propionyl-CoA: 35.5
Ethylmalonyl-CoA: 28.1
Benzoyl-CoA: 26.5
Acetyl-CoA: 22.1
trans-1,2-CPDA: 14.6
2-Methylbutyryl-CoA: 13.2
CHC-CoA: 12.2
3-Methylbutyryl-CoA: 11.5
fatty_acid: 0.0

ctg165_4

PKS_AT (169..467): mal

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 100.0%; 2-Rhyd-Malonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 210.4
inactive: 201.5
Methoxymalonyl-CoA: 60.8
Methylmalonyl-CoA: 56.7
Propionyl-CoA: 37.3
Isobutyryl-CoA: 25.2
Benzoyl-CoA: 17.7
Acetyl-CoA: 13.8
Ethylmalonyl-CoA: 13.5
2-Methylbutyryl-CoA: 12.2
trans-1,2-CPDA: 11.9
CHC-CoA: 11.2
fatty_acid: 0.0
3-Methylbutyryl-CoA: 0.0

c00171_3300003.. - Region 1 - terpene

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Location: 1 - 13,595 nt. (total: 13,595 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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c00176_3300003.. - Region 1 - NRPS,T1PKS

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Location: 1 - 52,548 nt. (total: 52,548 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 52548:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (ohmal - cys) + (cys) + (redmal) + (cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg176_3

Search NORINE for peptide: strict or relaxed

AMP-binding (538..936): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

ctg176_4

PKS_AT (529..823): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 83.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 170.8
inactive: 121.3
Methoxymalonyl-CoA: 67.4
Methylmalonyl-CoA: 61.8
Propionyl-CoA: 38.8
Isobutyryl-CoA: 36.2
Ethylmalonyl-CoA: 26.5
2-Methylbutyryl-CoA: 23.1
Acetyl-CoA: 21.2
CHC-CoA: 21.0
Benzoyl-CoA: 16.9
3-Methylbutyryl-CoA: 14.4
fatty_acid: 12.5
trans-1,2-CPDA: 12.3

ctg176_5

Search NORINE for peptide: strict or relaxed

AMP-binding (516..916): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

ctg176_6

Search NORINE for peptide: strict or relaxed

PKS_AT (531..813): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 83.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 150.4
inactive: 104.8
Methoxymalonyl-CoA: 53.6
Methylmalonyl-CoA: 53.1
Propionyl-CoA: 29.9
Benzoyl-CoA: 19.1
2-Methylbutyryl-CoA: 15.1
Isobutyryl-CoA: 14.8
Acetyl-CoA: 12.4
Ethylmalonyl-CoA: 12.2
CHC-CoA: 12.0
fatty_acid: 10.8
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

AMP-binding (1972..2373): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNLSLIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 100% (strong)

ctg176_7

Search NORINE for peptide: strict or relaxed

AMP-binding (539..939): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DmYntGVLWK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 70% (weak)

ctg176_16

Search NORINE for peptide: strict or relaxed

AMP-binding (24..421): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: aynfVAGhIK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 50% (weak)

c00180_3300003.. - Region 1 - cyanobactin

Download region GenBank file

Location: 1 - 21,109 nt. (total: 21,109 nt) Show pHMM detection rules used

Region on contig edge.

cyanobactin: cyanobactin_synth

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