3300006056_61 - 9 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00038_3300006.. (original name was: 3300006056.a:Ga0075163_10000299)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	terpene	41,314	62,456

c00074_3300006.. (original name was: 3300006056.a:Ga0075163_10005129)

Region	Type	From	To	Most similar known cluster		Similarity
Region 74.1	NRPS	1	17,510

c00083_3300006.. (original name was: 3300006056.a:Ga0075163_10009391)

Region	Type	From	To	Most similar known cluster		Similarity
Region 83.1	NRPS-like	1	12,834

c00100_3300006.. (original name was: 3300006056.a:Ga0075163_10036470)

Region	Type	From	To	Most similar known cluster		Similarity
Region 100.1	NRPS	1	6,145

c00114_3300006.. (original name was: 3300006056.a:Ga0075163_10021227)

Region	Type	From	To	Most similar known cluster		Similarity
Region 114.1	T1PKS	1	8,284

c00129_3300006.. (original name was: 3300006056.a:Ga0075163_10127186)

Region	Type	From	To	Most similar known cluster		Similarity
Region 129.1	NRPS	1	3,039

c00149_3300006.. (original name was: 3300006056.a:Ga0075163_10000395)

Region	Type	From	To	Most similar known cluster		Similarity
Region 149.1	terpene	21,000	41,932

c00169_3300006.. (original name was: 3300006056.a:Ga0075163_10019255)

Region	Type	From	To	Most similar known cluster		Similarity
Region 169.1	betalactone	1	8,737

c00185_3300006.. (original name was: 3300006056.a:Ga0075163_10004484)

Region	Type	From	To	Most similar known cluster		Similarity
Region 185.1	terpene	1	12,524

Region	Type	From	To	Similarity
Region 38.1	terpene	41,314	62,456
Region 74.1	NRPS	1	17,510
Region 83.1	NRPS-like	1	12,834
Region 100.1	NRPS	1	6,145
Region 114.1	T1PKS	1	8,284
Region 129.1	NRPS	1	3,039
Region 149.1	terpene	21,000	41,932
Region 169.1	betalactone	1	8,737
Region 185.1	terpene	1	12,524

No secondary metabolite regions were found in these records:: c00001_3300006.. (original name was: 3300006056.a:Ga0075163_10033389); c00002_3300006.. (original name was: 3300006056.a:Ga0075163_10021865); c00003_3300006.. (original name was: 3300006056.a:Ga0075163_10090379); c00004_3300006.. (original name was: 3300006056.a:Ga0075163_10120270); c00005_3300006.. (original name was: 3300006056.a:Ga0075163_10091824); c00006_3300006.. (original name was: 3300006056.a:Ga0075163_10095843); c00007_3300006.. (original name was: 3300006056.a:Ga0075163_10077577); c00008_3300006.. (original name was: 3300006056.a:Ga0075163_10057171); c00009_3300006.. (original name was: 3300006056.a:Ga0075163_10109128); c00010_3300006.. (original name was: 3300006056.a:Ga0075163_10035834); c00011_3300006.. (original name was: 3300006056.a:Ga0075163_10049267); c00012_3300006.. (original name was: 3300006056.a:Ga0075163_10057694); c00013_3300006.. (original name was: 3300006056.a:Ga0075163_10117775); c00014_3300006.. (original name was: 3300006056.a:Ga0075163_10012480); c00015_3300006.. (original name was: 3300006056.a:Ga0075163_10084055); c00016_3300006.. (original name was: 3300006056.a:Ga0075163_10015655); c00017_3300006.. (original name was: 3300006056.a:Ga0075163_10115641); c00018_3300006.. (original name was: 3300006056.a:Ga0075163_10090204); c00019_3300006.. (original name was: 3300006056.a:Ga0075163_10062036); c00020_3300006.. (original name was: 3300006056.a:Ga0075163_10032715); c00021_3300006.. (original name was: 3300006056.a:Ga0075163_10035028); c00022_3300006.. (original name was: 3300006056.a:Ga0075163_10093989); c00023_3300006.. (original name was: 3300006056.a:Ga0075163_10011744); c00024_3300006.. (original name was: 3300006056.a:Ga0075163_10117853); c00025_3300006.. (original name was: 3300006056.a:Ga0075163_10063216); c00026_3300006.. (original name was: 3300006056.a:Ga0075163_10109957); c00027_3300006.. (original name was: 3300006056.a:Ga0075163_10045964); c00028_3300006.. (original name was: 3300006056.a:Ga0075163_10129981); c00029_3300006.. (original name was: 3300006056.a:Ga0075163_10006367); c00030_3300006.. (original name was: 3300006056.a:Ga0075163_10095976); c00031_3300006.. (original name was: 3300006056.a:Ga0075163_10101850); c00032_3300006.. (original name was: 3300006056.a:Ga0075163_10053691); c00033_3300006.. (original name was: 3300006056.a:Ga0075163_10035169); c00034_3300006.. (original name was: 3300006056.a:Ga0075163_10106379); c00035_3300006.. (original name was: 3300006056.a:Ga0075163_10103437); c00036_3300006.. (original name was: 3300006056.a:Ga0075163_10093231); c00037_3300006.. (original name was: 3300006056.a:Ga0075163_10092418); c00039_3300006.. (original name was: 3300006056.a:Ga0075163_10016350); c00040_3300006.. (original name was: 3300006056.a:Ga0075163_10048382); c00041_3300006.. (original name was: 3300006056.a:Ga0075163_10040231); c00042_3300006.. (original name was: 3300006056.a:Ga0075163_10000365); c00043_3300006.. (original name was: 3300006056.a:Ga0075163_10093032); c00044_3300006.. (original name was: 3300006056.a:Ga0075163_10048747); c00045_3300006.. (original name was: 3300006056.a:Ga0075163_10107025); c00046_3300006.. (original name was: 3300006056.a:Ga0075163_10040261); c00047_3300006.. (original name was: 3300006056.a:Ga0075163_10040552); c00048_3300006.. (original name was: 3300006056.a:Ga0075163_10000270); c00049_3300006.. (original name was: 3300006056.a:Ga0075163_10001404); c00050_3300006.. (original name was: 3300006056.a:Ga0075163_10066492); c00051_3300006.. (original name was: 3300006056.a:Ga0075163_10090829); c00052_3300006.. (original name was: 3300006056.a:Ga0075163_10010153); c00053_3300006.. (original name was: 3300006056.a:Ga0075163_10114225); c00054_3300006.. (original name was: 3300006056.a:Ga0075163_10060439); c00055_3300006.. (original name was: 3300006056.a:Ga0075163_10005001); c00056_3300006.. (original name was: 3300006056.a:Ga0075163_10004044); c00057_3300006.. (original name was: 3300006056.a:Ga0075163_10014123); c00058_3300006.. (original name was: 3300006056.a:Ga0075163_10113548); c00059_3300006.. (original name was: 3300006056.a:Ga0075163_10044479); c00060_3300006.. (original name was: 3300006056.a:Ga0075163_10031411); c00061_3300006.. (original name was: 3300006056.a:Ga0075163_10000336); c00062_3300006.. (original name was: 3300006056.a:Ga0075163_10000710); c00063_3300006.. (original name was: 3300006056.a:Ga0075163_10103693); c00064_3300006.. (original name was: 3300006056.a:Ga0075163_10049573); c00065_3300006.. (original name was: 3300006056.a:Ga0075163_10002310); c00066_3300006.. (original name was: 3300006056.a:Ga0075163_10025415); c00067_3300006.. (original name was: 3300006056.a:Ga0075163_10000843); c00068_3300006.. (original name was: 3300006056.a:Ga0075163_10042214); c00069_3300006.. (original name was: 3300006056.a:Ga0075163_10007905); c00070_3300006.. (original name was: 3300006056.a:Ga0075163_10022501); c00071_3300006.. (original name was: 3300006056.a:Ga0075163_10000049); c00072_3300006.. (original name was: 3300006056.a:Ga0075163_10023570); c00073_3300006.. (original name was: 3300006056.a:Ga0075163_10068380); c00075_3300006.. (original name was: 3300006056.a:Ga0075163_10000902); c00076_3300006.. (original name was: 3300006056.a:Ga0075163_10026905); c00077_3300006.. (original name was: 3300006056.a:Ga0075163_10012136); c00078_3300006.. (original name was: 3300006056.a:Ga0075163_10124583); c00079_3300006.. (original name was: 3300006056.a:Ga0075163_10088088); c00080_3300006.. (original name was: 3300006056.a:Ga0075163_10046072); c00081_3300006.. (original name was: 3300006056.a:Ga0075163_10002414); c00082_3300006.. (original name was: 3300006056.a:Ga0075163_10126492); c00084_3300006.. (original name was: 3300006056.a:Ga0075163_10004761); c00085_3300006.. (original name was: 3300006056.a:Ga0075163_10013199); c00086_3300006.. (original name was: 3300006056.a:Ga0075163_10066047); c00087_3300006.. (original name was: 3300006056.a:Ga0075163_10113494); c00088_3300006.. (original name was: 3300006056.a:Ga0075163_10007573); c00089_3300006.. (original name was: 3300006056.a:Ga0075163_10011692); c00090_3300006.. (original name was: 3300006056.a:Ga0075163_10046315); c00091_3300006.. (original name was: 3300006056.a:Ga0075163_10001396); c00092_3300006.. (original name was: 3300006056.a:Ga0075163_10001094); c00093_3300006.. (original name was: 3300006056.a:Ga0075163_10013182); c00094_3300006.. (original name was: 3300006056.a:Ga0075163_10129049); c00095_3300006.. (original name was: 3300006056.a:Ga0075163_10005690); c00096_3300006.. (original name was: 3300006056.a:Ga0075163_10030722); c00097_3300006.. (original name was: 3300006056.a:Ga0075163_10074281); c00098_3300006.. (original name was: 3300006056.a:Ga0075163_10007479); c00099_3300006.. (original name was: 3300006056.a:Ga0075163_10054293); c00101_3300006.. (original name was: 3300006056.a:Ga0075163_10009661); c00102_3300006.. (original name was: 3300006056.a:Ga0075163_10083021); c00103_3300006.. (original name was: 3300006056.a:Ga0075163_10023646); c00104_3300006.. (original name was: 3300006056.a:Ga0075163_10089685); c00105_3300006.. (original name was: 3300006056.a:Ga0075163_10021857); c00106_3300006.. (original name was: 3300006056.a:Ga0075163_10000547); c00107_3300006.. (original name was: 3300006056.a:Ga0075163_10014260); c00108_3300006.. (original name was: 3300006056.a:Ga0075163_10007910); c00109_3300006.. (original name was: 3300006056.a:Ga0075163_10014658); c00110_3300006.. (original name was: 3300006056.a:Ga0075163_10027233); c00111_3300006.. (original name was: 3300006056.a:Ga0075163_10002475); c00112_3300006.. (original name was: 3300006056.a:Ga0075163_10100183); c00113_3300006.. (original name was: 3300006056.a:Ga0075163_10009716); c00115_3300006.. (original name was: 3300006056.a:Ga0075163_10004157); c00116_3300006.. (original name was: 3300006056.a:Ga0075163_10000819); c00117_3300006.. (original name was: 3300006056.a:Ga0075163_10083197); c00118_3300006.. (original name was: 3300006056.a:Ga0075163_10011784); c00119_3300006.. (original name was: 3300006056.a:Ga0075163_10006945); c00120_3300006.. (original name was: 3300006056.a:Ga0075163_10002115); c00121_3300006.. (original name was: 3300006056.a:Ga0075163_10003345); c00122_3300006.. (original name was: 3300006056.a:Ga0075163_10090865); c00123_3300006.. (original name was: 3300006056.a:Ga0075163_10003809); c00124_3300006.. (original name was: 3300006056.a:Ga0075163_10035982); c00125_3300006.. (original name was: 3300006056.a:Ga0075163_10022975); c00126_3300006.. (original name was: 3300006056.a:Ga0075163_10001023); c00127_3300006.. (original name was: 3300006056.a:Ga0075163_10063761); c00128_3300006.. (original name was: 3300006056.a:Ga0075163_10034155); c00130_3300006.. (original name was: 3300006056.a:Ga0075163_10028027); c00131_3300006.. (original name was: 3300006056.a:Ga0075163_10022806); c00132_3300006.. (original name was: 3300006056.a:Ga0075163_10045506); c00133_3300006.. (original name was: 3300006056.a:Ga0075163_10008106); c00134_3300006.. (original name was: 3300006056.a:Ga0075163_10097729); c00135_3300006.. (original name was: 3300006056.a:Ga0075163_10006949); c00136_3300006.. (original name was: 3300006056.a:Ga0075163_10022534); c00137_3300006.. (original name was: 3300006056.a:Ga0075163_10011010); c00138_3300006.. (original name was: 3300006056.a:Ga0075163_10066859); c00139_3300006.. (original name was: 3300006056.a:Ga0075163_10001695); c00140_3300006.. (original name was: 3300006056.a:Ga0075163_10024919); c00141_3300006.. (original name was: 3300006056.a:Ga0075163_10121730); c00142_3300006.. (original name was: 3300006056.a:Ga0075163_10065234); c00143_3300006.. (original name was: 3300006056.a:Ga0075163_10001252); c00144_3300006.. (original name was: 3300006056.a:Ga0075163_10122053); c00145_3300006.. (original name was: 3300006056.a:Ga0075163_10017828); c00146_3300006.. (original name was: 3300006056.a:Ga0075163_10007109); c00147_3300006.. (original name was: 3300006056.a:Ga0075163_10065519); c00148_3300006.. (original name was: 3300006056.a:Ga0075163_10002047); c00150_3300006.. (original name was: 3300006056.a:Ga0075163_10011522); c00151_3300006.. (original name was: 3300006056.a:Ga0075163_10110959); c00152_3300006.. (original name was: 3300006056.a:Ga0075163_10124909); c00153_3300006.. (original name was: 3300006056.a:Ga0075163_10005915); c00154_3300006.. (original name was: 3300006056.a:Ga0075163_10007116); c00155_3300006.. (original name was: 3300006056.a:Ga0075163_10001155); c00156_3300006.. (original name was: 3300006056.a:Ga0075163_10092643); c00157_3300006.. (original name was: 3300006056.a:Ga0075163_10010174); c00158_3300006.. (original name was: 3300006056.a:Ga0075163_10019275); c00159_3300006.. (original name was: 3300006056.a:Ga0075163_10103647); c00160_3300006.. (original name was: 3300006056.a:Ga0075163_10050998); c00161_3300006.. (original name was: 3300006056.a:Ga0075163_10003480); c00162_3300006.. (original name was: 3300006056.a:Ga0075163_10019293); c00163_3300006.. (original name was: 3300006056.a:Ga0075163_10023795); c00164_3300006.. (original name was: 3300006056.a:Ga0075163_10000599); c00165_3300006.. (original name was: 3300006056.a:Ga0075163_10002113); c00166_3300006.. (original name was: 3300006056.a:Ga0075163_10001577); c00167_3300006.. (original name was: 3300006056.a:Ga0075163_10029251); c00168_3300006.. (original name was: 3300006056.a:Ga0075163_10011795); c00170_3300006.. (original name was: 3300006056.a:Ga0075163_10129207); c00171_3300006.. (original name was: 3300006056.a:Ga0075163_10002150); c00172_3300006.. (original name was: 3300006056.a:Ga0075163_10051103); c00173_3300006.. (original name was: 3300006056.a:Ga0075163_10020719); c00174_3300006.. (original name was: 3300006056.a:Ga0075163_10003150); c00175_3300006.. (original name was: 3300006056.a:Ga0075163_10035527); c00176_3300006.. (original name was: 3300006056.a:Ga0075163_10006300); c00177_3300006.. (original name was: 3300006056.a:Ga0075163_10001860); c00178_3300006.. (original name was: 3300006056.a:Ga0075163_10027421); c00179_3300006.. (original name was: 3300006056.a:Ga0075163_10000216); c00180_3300006.. (original name was: 3300006056.a:Ga0075163_10007972); c00181_3300006.. (original name was: 3300006056.a:Ga0075163_10002636); c00182_3300006.. (original name was: 3300006056.a:Ga0075163_10012862); c00183_3300006.. (original name was: 3300006056.a:Ga0075163_10034732); c00184_3300006.. (original name was: 3300006056.a:Ga0075163_10105874); c00186_3300006.. (original name was: 3300006056.a:Ga0075163_10052354); c00187_3300006.. (original name was: 3300006056.a:Ga0075163_10035587); c00188_3300006.. (original name was: 3300006056.a:Ga0075163_10025078); c00189_3300006.. (original name was: 3300006056.a:Ga0075163_10118237); c00190_3300006.. (original name was: 3300006056.a:Ga0075163_10002059); c00191_3300006.. (original name was: 3300006056.a:Ga0075163_10128289); c00192_3300006.. (original name was: 3300006056.a:Ga0075163_10016899); c00193_3300006.. (original name was: 3300006056.a:Ga0075163_10001407); c00194_3300006.. (original name was: 3300006056.a:Ga0075163_10000241); c00195_3300006.. (original name was: 3300006056.a:Ga0075163_10016246); c00196_3300006.. (original name was: 3300006056.a:Ga0075163_10023395); c00197_3300006.. (original name was: 3300006056.a:Ga0075163_10007126); c00198_3300006.. (original name was: 3300006056.a:Ga0075163_10049888); c00199_3300006.. (original name was: 3300006056.a:Ga0075163_10007993); c00200_3300006.. (original name was: 3300006056.a:Ga0075163_10072661); c00201_3300006.. (original name was: 3300006056.a:Ga0075163_10024034); c00202_3300006.. (original name was: 3300006056.a:Ga0075163_10117413); c00203_3300006.. (original name was: 3300006056.a:Ga0075163_10015817); c00204_3300006.. (original name was: 3300006056.a:Ga0075163_10001905); c00205_3300006.. (original name was: 3300006056.a:Ga0075163_10029116); c00206_3300006.. (original name was: 3300006056.a:Ga0075163_10008955); c00207_3300006.. (original name was: 3300006056.a:Ga0075163_10020454); c00208_3300006.. (original name was: 3300006056.a:Ga0075163_10001309); c00209_3300006.. (original name was: 3300006056.a:Ga0075163_10023724); c00210_3300006.. (original name was: 3300006056.a:Ga0075163_10102320); c00211_3300006.. (original name was: 3300006056.a:Ga0075163_10102226); c00212_3300006.. (original name was: 3300006056.a:Ga0075163_10012373); c00213_3300006.. (original name was: 3300006056.a:Ga0075163_10069743); c00214_3300006.. (original name was: 3300006056.a:Ga0075163_10002669); c00215_3300006.. (original name was: 3300006056.a:Ga0075163_10047082); c00216_3300006.. (original name was: 3300006056.a:Ga0075163_10043338); c00217_3300006.. (original name was: 3300006056.a:Ga0075163_10040834); c00218_3300006.. (original name was: 3300006056.a:Ga0075163_10103417); c00219_3300006.. (original name was: 3300006056.a:Ga0075163_10104445); c00220_3300006.. (original name was: 3300006056.a:Ga0075163_10008338); c00221_3300006.. (original name was: 3300006056.a:Ga0075163_10122219); c00222_3300006.. (original name was: 3300006056.a:Ga0075163_10007620); c00223_3300006.. (original name was: 3300006056.a:Ga0075163_10067837); c00224_3300006.. (original name was: 3300006056.a:Ga0075163_10039499); c00225_3300006.. (original name was: 3300006056.a:Ga0075163_10123538); c00226_3300006.. (original name was: 3300006056.a:Ga0075163_10005789); c00227_3300006.. (original name was: 3300006056.a:Ga0075163_10080810); c00228_3300006.. (original name was: 3300006056.a:Ga0075163_10012751); c00229_3300006.. (original name was: 3300006056.a:Ga0075163_10094697); c00230_3300006.. (original name was: 3300006056.a:Ga0075163_10087004); c00231_3300006.. (original name was: 3300006056.a:Ga0075163_10046403); c00232_3300006.. (original name was: 3300006056.a:Ga0075163_10098819); c00233_3300006.. (original name was: 3300006056.a:Ga0075163_10016402); c00234_3300006.. (original name was: 3300006056.a:Ga0075163_10066424); c00235_3300006.. (original name was: 3300006056.a:Ga0075163_10038037)

Compact view

c00038_3300006.. - Region 1 - terpene

Download region GenBank file

Location: 41,314 - 62,456 nt. (total: 21,143 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00074_3300006.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 17,510 nt. (total: 17,510 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 17510:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg74_8

Search NORINE for peptide: strict or relaxed

CAL_domain (45..484): pk

minowa: Acetyl-CoA

Prediction, score:

Acetyl-CoA: 42.5
fatty_acid: 23.5
NH2: 19.1
AHBA: 14.5
shikimic_acid: 0.0

AMP-binding (1177..1585): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DTEdiGTvaK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 60% (weak)

AMP-binding (2253..2646): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

c00083_3300006.. - Region 1 - NRPS-like

Download region GenBank file

Location: 1 - 12,834 nt. (total: 12,834 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 12834:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg83_1

Search NORINE for peptide: strict or relaxed

AMP-binding (0..361): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVegIGaItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

c00100_3300006.. - Region 1 - NRPS

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Location: 1 - 6,145 nt. (total: 6,145 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00114_3300006.. - Region 1 - T1PKS

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Location: 1 - 8,284 nt. (total: 8,284 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 8284:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg114_2

PKS_AT (542..826): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 192.8
inactive: 116.8
Methoxymalonyl-CoA: 77.0
Methylmalonyl-CoA: 66.8
Propionyl-CoA: 48.3
Ethylmalonyl-CoA: 32.9
Isobutyryl-CoA: 32.7
2-Methylbutyryl-CoA: 27.1
CHC-CoA: 21.8
Benzoyl-CoA: 18.4
trans-1,2-CPDA: 17.2
Acetyl-CoA: 14.3
fatty_acid: 12.7
3-Methylbutyryl-CoA: 7.6

ctg114_4

Search NORINE for peptide: strict or relaxed

AMP-binding (1..221): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenIGSItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 70% (weak)

c00129_3300006.. - Region 1 - NRPS

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Location: 1 - 3,039 nt. (total: 3,039 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00149_3300006.. - Region 1 - terpene

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Location: 21,000 - 41,932 nt. (total: 20,933 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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Gene details

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c00169_3300006.. - Region 1 - betalactone

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Location: 1 - 8,737 nt. (total: 8,737 nt) Show pHMM detection rules used

Region on contig edge.

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

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c00185_3300006.. - Region 1 - terpene

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Location: 1 - 12,524 nt. (total: 12,524 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it