3300007222_13 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00016_3300007.. (original name was: 3300007222.a:Ga0104061_100338)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	NRPS	34,365	73,450

c00103_3300007.. (original name was: 3300007222.a:Ga0104061_102058)

Region	Type	From	To	Most similar known cluster		Similarity
Region 103.1	sactipeptide	1	13,964

Region	Type	From	To	Most similar known cluster	Similarity
Region 16.1	NRPS	34,365	73,450
Region 103.1	sactipeptide	1	13,964

No secondary metabolite regions were found in these records:: c00001_3300007.. (original name was: 3300007222.a:Ga0104061_100179); c00002_3300007.. (original name was: 3300007222.a:Ga0104061_103634); c00003_3300007.. (original name was: 3300007222.a:Ga0104061_107392); c00004_3300007.. (original name was: 3300007222.a:Ga0104061_109710); c00005_3300007.. (original name was: 3300007222.a:Ga0104061_108715); c00006_3300007.. (original name was: 3300007222.a:Ga0104061_102356); c00007_3300007.. (original name was: 3300007222.a:Ga0104061_107550); c00008_3300007.. (original name was: 3300007222.a:Ga0104061_102410); c00009_3300007.. (original name was: 3300007222.a:Ga0104061_106692); c00010_3300007.. (original name was: 3300007222.a:Ga0104061_105343); c00011_3300007.. (original name was: 3300007222.a:Ga0104061_100404); c00012_3300007.. (original name was: 3300007222.a:Ga0104061_101645); c00013_3300007.. (original name was: 3300007222.a:Ga0104061_102965); c00014_3300007.. (original name was: 3300007222.a:Ga0104061_100184); c00015_3300007.. (original name was: 3300007222.a:Ga0104061_101152); c00017_3300007.. (original name was: 3300007222.a:Ga0104061_102727); c00018_3300007.. (original name was: 3300007222.a:Ga0104061_106985); c00019_3300007.. (original name was: 3300007222.a:Ga0104061_101829); c00020_3300007.. (original name was: 3300007222.a:Ga0104061_101256); c00021_3300007.. (original name was: 3300007222.a:Ga0104061_104529); c00022_3300007.. (original name was: 3300007222.a:Ga0104061_105131); c00023_3300007.. (original name was: 3300007222.a:Ga0104061_104041); c00024_3300007.. (original name was: 3300007222.a:Ga0104061_102596); c00025_3300007.. (original name was: 3300007222.a:Ga0104061_101182); c00026_3300007.. (original name was: 3300007222.a:Ga0104061_100373); c00027_3300007.. (original name was: 3300007222.a:Ga0104061_102339); c00028_3300007.. (original name was: 3300007222.a:Ga0104061_100794); c00029_3300007.. (original name was: 3300007222.a:Ga0104061_100628); c00030_3300007.. (original name was: 3300007222.a:Ga0104061_100322); c00031_3300007.. (original name was: 3300007222.a:Ga0104061_101062); c00032_3300007.. (original name was: 3300007222.a:Ga0104061_109102); c00033_3300007.. (original name was: 3300007222.a:Ga0104061_103484); c00034_3300007.. (original name was: 3300007222.a:Ga0104061_101214); c00035_3300007.. (original name was: 3300007222.a:Ga0104061_107228); c00036_3300007.. (original name was: 3300007222.a:Ga0104061_102760); c00037_3300007.. (original name was: 3300007222.a:Ga0104061_103098); c00038_3300007.. (original name was: 3300007222.a:Ga0104061_106822); c00039_3300007.. (original name was: 3300007222.a:Ga0104061_102118); c00040_3300007.. (original name was: 3300007222.a:Ga0104061_102127); c00041_3300007.. (original name was: 3300007222.a:Ga0104061_109582); c00042_3300007.. (original name was: 3300007222.a:Ga0104061_104816); c00043_3300007.. (original name was: 3300007222.a:Ga0104061_108913); c00044_3300007.. (original name was: 3300007222.a:Ga0104061_100873); c00045_3300007.. (original name was: 3300007222.a:Ga0104061_100492); c00046_3300007.. (original name was: 3300007222.a:Ga0104061_104935); c00047_3300007.. (original name was: 3300007222.a:Ga0104061_100527); c00048_3300007.. (original name was: 3300007222.a:Ga0104061_102776); c00049_3300007.. (original name was: 3300007222.a:Ga0104061_100904); c00050_3300007.. (original name was: 3300007222.a:Ga0104061_101297); c00051_3300007.. (original name was: 3300007222.a:Ga0104061_104171); c00052_3300007.. (original name was: 3300007222.a:Ga0104061_101074); c00053_3300007.. (original name was: 3300007222.a:Ga0104061_100809); c00054_3300007.. (original name was: 3300007222.a:Ga0104061_102934); c00055_3300007.. (original name was: 3300007222.a:Ga0104061_104438); c00056_3300007.. (original name was: 3300007222.a:Ga0104061_100262); c00057_3300007.. (original name was: 3300007222.a:Ga0104061_101768); c00058_3300007.. (original name was: 3300007222.a:Ga0104061_102113); c00059_3300007.. (original name was: 3300007222.a:Ga0104061_104463); c00060_3300007.. (original name was: 3300007222.a:Ga0104061_100716); c00061_3300007.. (original name was: 3300007222.a:Ga0104061_108346); c00062_3300007.. (original name was: 3300007222.a:Ga0104061_104241); c00063_3300007.. (original name was: 3300007222.a:Ga0104061_102623); c00064_3300007.. (original name was: 3300007222.a:Ga0104061_102179); c00065_3300007.. (original name was: 3300007222.a:Ga0104061_100730); c00066_3300007.. (original name was: 3300007222.a:Ga0104061_100141); c00067_3300007.. (original name was: 3300007222.a:Ga0104061_101695); c00068_3300007.. (original name was: 3300007222.a:Ga0104061_102100); c00069_3300007.. (original name was: 3300007222.a:Ga0104061_101207); c00070_3300007.. (original name was: 3300007222.a:Ga0104061_100295); c00071_3300007.. (original name was: 3300007222.a:Ga0104061_102057); c00072_3300007.. (original name was: 3300007222.a:Ga0104061_102941); c00073_3300007.. (original name was: 3300007222.a:Ga0104061_101962); c00074_3300007.. (original name was: 3300007222.a:Ga0104061_100635); c00075_3300007.. (original name was: 3300007222.a:Ga0104061_101776); c00076_3300007.. (original name was: 3300007222.a:Ga0104061_102002); c00077_3300007.. (original name was: 3300007222.a:Ga0104061_105199); c00078_3300007.. (original name was: 3300007222.a:Ga0104061_103023); c00079_3300007.. (original name was: 3300007222.a:Ga0104061_101960); c00080_3300007.. (original name was: 3300007222.a:Ga0104061_107198); c00081_3300007.. (original name was: 3300007222.a:Ga0104061_100511); c00082_3300007.. (original name was: 3300007222.a:Ga0104061_106675); c00083_3300007.. (original name was: 3300007222.a:Ga0104061_101198); c00084_3300007.. (original name was: 3300007222.a:Ga0104061_101196); c00085_3300007.. (original name was: 3300007222.a:Ga0104061_101882); c00086_3300007.. (original name was: 3300007222.a:Ga0104061_101111); c00087_3300007.. (original name was: 3300007222.a:Ga0104061_102383); c00088_3300007.. (original name was: 3300007222.a:Ga0104061_108985); c00089_3300007.. (original name was: 3300007222.a:Ga0104061_102507); c00090_3300007.. (original name was: 3300007222.a:Ga0104061_101657); c00091_3300007.. (original name was: 3300007222.a:Ga0104061_101184); c00092_3300007.. (original name was: 3300007222.a:Ga0104061_101865); c00093_3300007.. (original name was: 3300007222.a:Ga0104061_103196); c00094_3300007.. (original name was: 3300007222.a:Ga0104061_103937); c00095_3300007.. (original name was: 3300007222.a:Ga0104061_100824); c00096_3300007.. (original name was: 3300007222.a:Ga0104061_100210); c00097_3300007.. (original name was: 3300007222.a:Ga0104061_101641); c00098_3300007.. (original name was: 3300007222.a:Ga0104061_102529); c00099_3300007.. (original name was: 3300007222.a:Ga0104061_104799); c00100_3300007.. (original name was: 3300007222.a:Ga0104061_101382); c00101_3300007.. (original name was: 3300007222.a:Ga0104061_106838); c00102_3300007.. (original name was: 3300007222.a:Ga0104061_101286); c00104_3300007.. (original name was: 3300007222.a:Ga0104061_101844); c00105_3300007.. (original name was: 3300007222.a:Ga0104061_100876); c00106_3300007.. (original name was: 3300007222.a:Ga0104061_100721); c00107_3300007.. (original name was: 3300007222.a:Ga0104061_101761); c00108_3300007.. (original name was: 3300007222.a:Ga0104061_100947); c00109_3300007.. (original name was: 3300007222.a:Ga0104061_109074); c00110_3300007.. (original name was: 3300007222.a:Ga0104061_101249); c00111_3300007.. (original name was: 3300007222.a:Ga0104061_100986); c00112_3300007.. (original name was: 3300007222.a:Ga0104061_102072); c00113_3300007.. (original name was: 3300007222.a:Ga0104061_102612); c00114_3300007.. (original name was: 3300007222.a:Ga0104061_100475); c00115_3300007.. (original name was: 3300007222.a:Ga0104061_100900); c00116_3300007.. (original name was: 3300007222.a:Ga0104061_101938); c00117_3300007.. (original name was: 3300007222.a:Ga0104061_100851); c00118_3300007.. (original name was: 3300007222.a:Ga0104061_101226); c00119_3300007.. (original name was: 3300007222.a:Ga0104061_100916); c00120_3300007.. (original name was: 3300007222.a:Ga0104061_102060); c00121_3300007.. (original name was: 3300007222.a:Ga0104061_103690)

Compact view

c00016_3300007.. - Region 1 - NRPS

Download region GenBank file

Location: 34,365 - 73,450 nt. (total: 39,086 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 34364 - 73450:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg16_42

Search NORINE for peptide: strict or relaxed

AMP-binding (20..419): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLtdgGIsK
Nearest Stachelhaus code:: aeo
Stachelhaus code match:: 60% (weak)

AMP-binding (1033..1421): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmfsGAIfK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 60% (weak)

AMP-binding (2027..2418): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAiTTGgVsK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 70% (weak)

c00103_3300007.. - Region 1 - sactipeptide

Download region GenBank file

Location: 1 - 13,964 nt. (total: 13,964 nt) Show pHMM detection rules used

Region on contig edge.

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.