3300007312_7 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00025_3300007.. (original name was: 3300007312.a:Ga0104941_100373)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	NRPS	7,793	41,379

c00031_3300007.. (original name was: 3300007312.a:Ga0104941_100062)

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	sactipeptide	26,190	46,333

Region	Type	From	To	Most similar known cluster	Similarity
Region 25.1	NRPS	7,793	41,379
Region 31.1	sactipeptide	26,190	46,333

No secondary metabolite regions were found in these records:: c00001_3300007.. (original name was: 3300007312.a:Ga0104941_100568); c00002_3300007.. (original name was: 3300007312.a:Ga0104941_100461); c00003_3300007.. (original name was: 3300007312.a:Ga0104941_100303); c00004_3300007.. (original name was: 3300007312.a:Ga0104941_100252); c00005_3300007.. (original name was: 3300007312.a:Ga0104941_101000); c00006_3300007.. (original name was: 3300007312.a:Ga0104941_100253); c00007_3300007.. (original name was: 3300007312.a:Ga0104941_102117); c00008_3300007.. (original name was: 3300007312.a:Ga0104941_100671); c00009_3300007.. (original name was: 3300007312.a:Ga0104941_101902); c00010_3300007.. (original name was: 3300007312.a:Ga0104941_101610); c00011_3300007.. (original name was: 3300007312.a:Ga0104941_100212); c00012_3300007.. (original name was: 3300007312.a:Ga0104941_101249); c00013_3300007.. (original name was: 3300007312.a:Ga0104941_100190); c00014_3300007.. (original name was: 3300007312.a:Ga0104941_100170); c00015_3300007.. (original name was: 3300007312.a:Ga0104941_101938); c00016_3300007.. (original name was: 3300007312.a:Ga0104941_100784); c00017_3300007.. (original name was: 3300007312.a:Ga0104941_100060); c00018_3300007.. (original name was: 3300007312.a:Ga0104941_101242); c00019_3300007.. (original name was: 3300007312.a:Ga0104941_100592); c00020_3300007.. (original name was: 3300007312.a:Ga0104941_101334); c00021_3300007.. (original name was: 3300007312.a:Ga0104941_101115); c00022_3300007.. (original name was: 3300007312.a:Ga0104941_101309); c00023_3300007.. (original name was: 3300007312.a:Ga0104941_100189); c00024_3300007.. (original name was: 3300007312.a:Ga0104941_100204); c00026_3300007.. (original name was: 3300007312.a:Ga0104941_100262); c00027_3300007.. (original name was: 3300007312.a:Ga0104941_103585); c00028_3300007.. (original name was: 3300007312.a:Ga0104941_100792); c00029_3300007.. (original name was: 3300007312.a:Ga0104941_101333); c00030_3300007.. (original name was: 3300007312.a:Ga0104941_103862); c00032_3300007.. (original name was: 3300007312.a:Ga0104941_100778); c00033_3300007.. (original name was: 3300007312.a:Ga0104941_100474); c00034_3300007.. (original name was: 3300007312.a:Ga0104941_100269); c00035_3300007.. (original name was: 3300007312.a:Ga0104941_101377); c00036_3300007.. (original name was: 3300007312.a:Ga0104941_100278); c00037_3300007.. (original name was: 3300007312.a:Ga0104941_100716); c00038_3300007.. (original name was: 3300007312.a:Ga0104941_100270); c00039_3300007.. (original name was: 3300007312.a:Ga0104941_101815); c00040_3300007.. (original name was: 3300007312.a:Ga0104941_102042); c00041_3300007.. (original name was: 3300007312.a:Ga0104941_102068); c00042_3300007.. (original name was: 3300007312.a:Ga0104941_103335); c00043_3300007.. (original name was: 3300007312.a:Ga0104941_100215); c00044_3300007.. (original name was: 3300007312.a:Ga0104941_100736); c00045_3300007.. (original name was: 3300007312.a:Ga0104941_100939); c00046_3300007.. (original name was: 3300007312.a:Ga0104941_100153); c00047_3300007.. (original name was: 3300007312.a:Ga0104941_100997); c00048_3300007.. (original name was: 3300007312.a:Ga0104941_100574); c00049_3300007.. (original name was: 3300007312.a:Ga0104941_101067); c00050_3300007.. (original name was: 3300007312.a:Ga0104941_101234); c00051_3300007.. (original name was: 3300007312.a:Ga0104941_100273); c00052_3300007.. (original name was: 3300007312.a:Ga0104941_101810); c00053_3300007.. (original name was: 3300007312.a:Ga0104941_100466); c00054_3300007.. (original name was: 3300007312.a:Ga0104941_100420); c00055_3300007.. (original name was: 3300007312.a:Ga0104941_100816); c00056_3300007.. (original name was: 3300007312.a:Ga0104941_101214); c00057_3300007.. (original name was: 3300007312.a:Ga0104941_100659); c00058_3300007.. (original name was: 3300007312.a:Ga0104941_100993); c00059_3300007.. (original name was: 3300007312.a:Ga0104941_100908); c00060_3300007.. (original name was: 3300007312.a:Ga0104941_100672); c00061_3300007.. (original name was: 3300007312.a:Ga0104941_100678); c00062_3300007.. (original name was: 3300007312.a:Ga0104941_100417); c00063_3300007.. (original name was: 3300007312.a:Ga0104941_101221); c00064_3300007.. (original name was: 3300007312.a:Ga0104941_100240); c00065_3300007.. (original name was: 3300007312.a:Ga0104941_101019); c00066_3300007.. (original name was: 3300007312.a:Ga0104941_100506); c00067_3300007.. (original name was: 3300007312.a:Ga0104941_101010); c00068_3300007.. (original name was: 3300007312.a:Ga0104941_100739); c00069_3300007.. (original name was: 3300007312.a:Ga0104941_101659); c00070_3300007.. (original name was: 3300007312.a:Ga0104941_100705); c00071_3300007.. (original name was: 3300007312.a:Ga0104941_102558); c00072_3300007.. (original name was: 3300007312.a:Ga0104941_100325); c00073_3300007.. (original name was: 3300007312.a:Ga0104941_101738); c00074_3300007.. (original name was: 3300007312.a:Ga0104941_100055); c00075_3300007.. (original name was: 3300007312.a:Ga0104941_103019); c00076_3300007.. (original name was: 3300007312.a:Ga0104941_101559); c00077_3300007.. (original name was: 3300007312.a:Ga0104941_103259); c00078_3300007.. (original name was: 3300007312.a:Ga0104941_101012); c00079_3300007.. (original name was: 3300007312.a:Ga0104941_102550); c00080_3300007.. (original name was: 3300007312.a:Ga0104941_101598); c00081_3300007.. (original name was: 3300007312.a:Ga0104941_103258); c00082_3300007.. (original name was: 3300007312.a:Ga0104941_101161); c00083_3300007.. (original name was: 3300007312.a:Ga0104941_101245); c00084_3300007.. (original name was: 3300007312.a:Ga0104941_102482); c00085_3300007.. (original name was: 3300007312.a:Ga0104941_101665); c00086_3300007.. (original name was: 3300007312.a:Ga0104941_100767); c00087_3300007.. (original name was: 3300007312.a:Ga0104941_101684); c00088_3300007.. (original name was: 3300007312.a:Ga0104941_100802); c00089_3300007.. (original name was: 3300007312.a:Ga0104941_101455); c00090_3300007.. (original name was: 3300007312.a:Ga0104941_100172); c00091_3300007.. (original name was: 3300007312.a:Ga0104941_100581); c00092_3300007.. (original name was: 3300007312.a:Ga0104941_100694); c00093_3300007.. (original name was: 3300007312.a:Ga0104941_100917); c00094_3300007.. (original name was: 3300007312.a:Ga0104941_100159)

Compact view

c00025_3300007.. - Region 1 - NRPS

Download region GenBank file

Location: 7,793 - 41,379 nt. (total: 33,587 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 7792 - 41379:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg25_28

Search NORINE for peptide: strict or relaxed

AMP-binding (20..419): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLtdgGIsK
Nearest Stachelhaus code:: aeo
Stachelhaus code match:: 60% (weak)

AMP-binding (1033..1421): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DamfSGVVlK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 60% (weak)

AMP-binding (2027..2418): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAiTTGgVsK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 70% (weak)

c00031_3300007.. - Region 1 - sactipeptide

Download region GenBank file

Location: 26,190 - 46,333 nt. (total: 20,144 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.