3300010299_6 - 11 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00001_3300010.. (original name was: 3300010299.a:Ga0129342_1008801)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	NRPS-like	1	4,310

c00002_3300010.. (original name was: 3300010299.a:Ga0129342_1004848)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T1PKS,NRPS-like	1	5,892

c00003_3300010.. (original name was: 3300010299.a:Ga0129342_1000572)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	T1PKS,NRPS	1	15,952

c00004_3300010.. (original name was: 3300010299.a:Ga0129342_1000480)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T1PKS,NRPS	1	16,975

c00005_3300010.. (original name was: 3300010299.a:Ga0129342_1000197)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	NRPS-like,T1PKS	1	24,084

c00091_3300010.. (original name was: 3300010299.a:Ga0129342_1000140)

Region	Type	From	To	Most similar known cluster		Similarity
Region 91.1	NRPS,T1PKS	1	27,006

c00123_3300010.. (original name was: 3300010299.a:Ga0129342_1007840)

Region	Type	From	To	Most similar known cluster		Similarity
Region 123.1	bacteriocin,NRPS	1	4,587

c00177_3300010.. (original name was: 3300010299.a:Ga0129342_1000068)

Region	Type	From	To	Most similar known cluster		Similarity
Region 177.1	betalactone	1	25,408

c00216_3300010.. (original name was: 3300010299.a:Ga0129342_1003171)

Region	Type	From	To	Most similar known cluster		Similarity
Region 216.1	T1PKS	1	7,321

c00226_3300010.. (original name was: 3300010299.a:Ga0129342_1004084)

Region	Type	From	To	Most similar known cluster		Similarity
Region 226.1	bacteriocin	1	6,463

c00232_3300010.. (original name was: 3300010299.a:Ga0129342_1008069)

Region	Type	From	To	Most similar known cluster		Similarity
Region 232.1	terpene	1	4,521

Region	Type	From	To	Similarity
Region 1.1	NRPS-like	1	4,310
Region 2.1	T1PKS,NRPS-like	1	5,892
Region 3.1	T1PKS,NRPS	1	15,952
Region 4.1	T1PKS,NRPS	1	16,975
Region 5.1	NRPS-like,T1PKS	1	24,084
Region 91.1	NRPS,T1PKS	1	27,006
Region 123.1	bacteriocin,NRPS	1	4,587
Region 177.1	betalactone	1	25,408
Region 216.1	T1PKS	1	7,321
Region 226.1	bacteriocin	1	6,463
Region 232.1	terpene	1	4,521

No secondary metabolite regions were found in these records:: c00006_3300010.. (original name was: 3300010299.a:Ga0129342_1006651); c00007_3300010.. (original name was: 3300010299.a:Ga0129342_1005312); c00008_3300010.. (original name was: 3300010299.a:Ga0129342_1016685); c00009_3300010.. (original name was: 3300010299.a:Ga0129342_1014514); c00010_3300010.. (original name was: 3300010299.a:Ga0129342_1006513); c00011_3300010.. (original name was: 3300010299.a:Ga0129342_1015888); c00012_3300010.. (original name was: 3300010299.a:Ga0129342_1015671); c00013_3300010.. (original name was: 3300010299.a:Ga0129342_1015568); c00014_3300010.. (original name was: 3300010299.a:Ga0129342_1014620); c00015_3300010.. (original name was: 3300010299.a:Ga0129342_1013931); c00016_3300010.. (original name was: 3300010299.a:Ga0129342_1013329); c00017_3300010.. (original name was: 3300010299.a:Ga0129342_1011976); c00018_3300010.. (original name was: 3300010299.a:Ga0129342_1013019); c00019_3300010.. (original name was: 3300010299.a:Ga0129342_1008655); c00020_3300010.. (original name was: 3300010299.a:Ga0129342_1000599); c00021_3300010.. (original name was: 3300010299.a:Ga0129342_1007962); c00022_3300010.. (original name was: 3300010299.a:Ga0129342_1012910); c00023_3300010.. (original name was: 3300010299.a:Ga0129342_1006487); c00024_3300010.. (original name was: 3300010299.a:Ga0129342_1002128); c00025_3300010.. (original name was: 3300010299.a:Ga0129342_1000176); c00026_3300010.. (original name was: 3300010299.a:Ga0129342_1003415); c00027_3300010.. (original name was: 3300010299.a:Ga0129342_1001226); c00028_3300010.. (original name was: 3300010299.a:Ga0129342_1000525); c00029_3300010.. (original name was: 3300010299.a:Ga0129342_1008563); c00030_3300010.. (original name was: 3300010299.a:Ga0129342_1011577); c00031_3300010.. (original name was: 3300010299.a:Ga0129342_1009333); c00032_3300010.. (original name was: 3300010299.a:Ga0129342_1009344); c00033_3300010.. (original name was: 3300010299.a:Ga0129342_1003773); c00034_3300010.. (original name was: 3300010299.a:Ga0129342_1001280); c00035_3300010.. (original name was: 3300010299.a:Ga0129342_1004312); c00036_3300010.. (original name was: 3300010299.a:Ga0129342_1001879); c00037_3300010.. (original name was: 3300010299.a:Ga0129342_1006923); c00038_3300010.. (original name was: 3300010299.a:Ga0129342_1002388); c00039_3300010.. (original name was: 3300010299.a:Ga0129342_1002194); c00040_3300010.. (original name was: 3300010299.a:Ga0129342_1005446); c00041_3300010.. (original name was: 3300010299.a:Ga0129342_1003456); c00042_3300010.. (original name was: 3300010299.a:Ga0129342_1008403); c00043_3300010.. (original name was: 3300010299.a:Ga0129342_1000132); c00044_3300010.. (original name was: 3300010299.a:Ga0129342_1003754); c00045_3300010.. (original name was: 3300010299.a:Ga0129342_1005744); c00046_3300010.. (original name was: 3300010299.a:Ga0129342_1004507); c00047_3300010.. (original name was: 3300010299.a:Ga0129342_1001058); c00048_3300010.. (original name was: 3300010299.a:Ga0129342_1009429); c00049_3300010.. (original name was: 3300010299.a:Ga0129342_1006975); c00050_3300010.. (original name was: 3300010299.a:Ga0129342_1010688); c00051_3300010.. (original name was: 3300010299.a:Ga0129342_1005956); c00052_3300010.. (original name was: 3300010299.a:Ga0129342_1004924); c00053_3300010.. (original name was: 3300010299.a:Ga0129342_1013750); c00054_3300010.. (original name was: 3300010299.a:Ga0129342_1013362); c00055_3300010.. (original name was: 3300010299.a:Ga0129342_1013816); c00056_3300010.. (original name was: 3300010299.a:Ga0129342_1001025); c00057_3300010.. (original name was: 3300010299.a:Ga0129342_1006199); c00058_3300010.. (original name was: 3300010299.a:Ga0129342_1004080); c00059_3300010.. (original name was: 3300010299.a:Ga0129342_1016281); c00060_3300010.. (original name was: 3300010299.a:Ga0129342_1001692); c00061_3300010.. (original name was: 3300010299.a:Ga0129342_1002515); c00062_3300010.. (original name was: 3300010299.a:Ga0129342_1000879); c00063_3300010.. (original name was: 3300010299.a:Ga0129342_1005629); c00064_3300010.. (original name was: 3300010299.a:Ga0129342_1005231); c00065_3300010.. (original name was: 3300010299.a:Ga0129342_1000654); c00066_3300010.. (original name was: 3300010299.a:Ga0129342_1000853); c00067_3300010.. (original name was: 3300010299.a:Ga0129342_1000455); c00068_3300010.. (original name was: 3300010299.a:Ga0129342_1001234); c00069_3300010.. (original name was: 3300010299.a:Ga0129342_1001433); c00070_3300010.. (original name was: 3300010299.a:Ga0129342_1000361); c00071_3300010.. (original name was: 3300010299.a:Ga0129342_1014096); c00072_3300010.. (original name was: 3300010299.a:Ga0129342_1016882); c00073_3300010.. (original name was: 3300010299.a:Ga0129342_1002619); c00074_3300010.. (original name was: 3300010299.a:Ga0129342_1003028); c00075_3300010.. (original name was: 3300010299.a:Ga0129342_1009586); c00076_3300010.. (original name was: 3300010299.a:Ga0129342_1000179); c00077_3300010.. (original name was: 3300010299.a:Ga0129342_1005087); c00078_3300010.. (original name was: 3300010299.a:Ga0129342_1010024); c00079_3300010.. (original name was: 3300010299.a:Ga0129342_1000712); c00080_3300010.. (original name was: 3300010299.a:Ga0129342_1008928); c00081_3300010.. (original name was: 3300010299.a:Ga0129342_1006883); c00082_3300010.. (original name was: 3300010299.a:Ga0129342_1011259); c00083_3300010.. (original name was: 3300010299.a:Ga0129342_1000117); c00084_3300010.. (original name was: 3300010299.a:Ga0129342_1010343); c00085_3300010.. (original name was: 3300010299.a:Ga0129342_1001233); c00086_3300010.. (original name was: 3300010299.a:Ga0129342_1002866); c00087_3300010.. (original name was: 3300010299.a:Ga0129342_1000374); c00088_3300010.. (original name was: 3300010299.a:Ga0129342_1009854); c00089_3300010.. (original name was: 3300010299.a:Ga0129342_1002093); c00090_3300010.. (original name was: 3300010299.a:Ga0129342_1001656); c00092_3300010.. (original name was: 3300010299.a:Ga0129342_1012275); c00093_3300010.. (original name was: 3300010299.a:Ga0129342_1009361); c00094_3300010.. (original name was: 3300010299.a:Ga0129342_1005580); c00095_3300010.. (original name was: 3300010299.a:Ga0129342_1011649); c00096_3300010.. (original name was: 3300010299.a:Ga0129342_1009330); c00097_3300010.. (original name was: 3300010299.a:Ga0129342_1005240); c00098_3300010.. (original name was: 3300010299.a:Ga0129342_1002056); c00099_3300010.. (original name was: 3300010299.a:Ga0129342_1010765); c00100_3300010.. (original name was: 3300010299.a:Ga0129342_1012938); c00101_3300010.. (original name was: 3300010299.a:Ga0129342_1000531); c00102_3300010.. (original name was: 3300010299.a:Ga0129342_1000122); c00103_3300010.. (original name was: 3300010299.a:Ga0129342_1013632); c00104_3300010.. (original name was: 3300010299.a:Ga0129342_1005587); c00105_3300010.. (original name was: 3300010299.a:Ga0129342_1005199); c00106_3300010.. (original name was: 3300010299.a:Ga0129342_1006194); c00107_3300010.. (original name was: 3300010299.a:Ga0129342_1000224); c00108_3300010.. (original name was: 3300010299.a:Ga0129342_1008206); c00109_3300010.. (original name was: 3300010299.a:Ga0129342_1000445); c00110_3300010.. (original name was: 3300010299.a:Ga0129342_1005288); c00111_3300010.. (original name was: 3300010299.a:Ga0129342_1007227); c00112_3300010.. (original name was: 3300010299.a:Ga0129342_1000274); c00113_3300010.. (original name was: 3300010299.a:Ga0129342_1006642); c00114_3300010.. (original name was: 3300010299.a:Ga0129342_1003475); c00115_3300010.. (original name was: 3300010299.a:Ga0129342_1003151); c00116_3300010.. (original name was: 3300010299.a:Ga0129342_1000962); c00117_3300010.. (original name was: 3300010299.a:Ga0129342_1004285); c00118_3300010.. (original name was: 3300010299.a:Ga0129342_1007992); c00119_3300010.. (original name was: 3300010299.a:Ga0129342_1007583); c00120_3300010.. (original name was: 3300010299.a:Ga0129342_1006389); c00121_3300010.. (original name was: 3300010299.a:Ga0129342_1002126); c00122_3300010.. (original name was: 3300010299.a:Ga0129342_1009886); c00124_3300010.. (original name was: 3300010299.a:Ga0129342_1002523); c00125_3300010.. (original name was: 3300010299.a:Ga0129342_1007100); c00126_3300010.. (original name was: 3300010299.a:Ga0129342_1010974); c00127_3300010.. (original name was: 3300010299.a:Ga0129342_1017021); c00128_3300010.. (original name was: 3300010299.a:Ga0129342_1000847); c00129_3300010.. (original name was: 3300010299.a:Ga0129342_1005822); c00130_3300010.. (original name was: 3300010299.a:Ga0129342_1000126); c00131_3300010.. (original name was: 3300010299.a:Ga0129342_1006528); c00132_3300010.. (original name was: 3300010299.a:Ga0129342_1008717); c00133_3300010.. (original name was: 3300010299.a:Ga0129342_1001725); c00134_3300010.. (original name was: 3300010299.a:Ga0129342_1006224); c00135_3300010.. (original name was: 3300010299.a:Ga0129342_1001050); c00136_3300010.. (original name was: 3300010299.a:Ga0129342_1001381); c00137_3300010.. (original name was: 3300010299.a:Ga0129342_1014534); c00138_3300010.. (original name was: 3300010299.a:Ga0129342_1000605); c00139_3300010.. (original name was: 3300010299.a:Ga0129342_1005922); c00140_3300010.. (original name was: 3300010299.a:Ga0129342_1001103); c00141_3300010.. (original name was: 3300010299.a:Ga0129342_1002739); c00142_3300010.. (original name was: 3300010299.a:Ga0129342_1003852); c00143_3300010.. (original name was: 3300010299.a:Ga0129342_1011767); c00144_3300010.. (original name was: 3300010299.a:Ga0129342_1002405); c00145_3300010.. (original name was: 3300010299.a:Ga0129342_1004450); c00146_3300010.. (original name was: 3300010299.a:Ga0129342_1000360); c00147_3300010.. (original name was: 3300010299.a:Ga0129342_1007000); c00148_3300010.. (original name was: 3300010299.a:Ga0129342_1002092); c00149_3300010.. (original name was: 3300010299.a:Ga0129342_1000500); c00150_3300010.. (original name was: 3300010299.a:Ga0129342_1000133); c00151_3300010.. (original name was: 3300010299.a:Ga0129342_1000542); c00152_3300010.. (original name was: 3300010299.a:Ga0129342_1000722); c00153_3300010.. (original name was: 3300010299.a:Ga0129342_1013570); c00154_3300010.. (original name was: 3300010299.a:Ga0129342_1000127); c00155_3300010.. (original name was: 3300010299.a:Ga0129342_1002172); c00156_3300010.. (original name was: 3300010299.a:Ga0129342_1001969); c00157_3300010.. (original name was: 3300010299.a:Ga0129342_1000729); c00158_3300010.. (original name was: 3300010299.a:Ga0129342_1004001); c00159_3300010.. (original name was: 3300010299.a:Ga0129342_1001138); c00160_3300010.. (original name was: 3300010299.a:Ga0129342_1013016); c00161_3300010.. (original name was: 3300010299.a:Ga0129342_1016207); c00162_3300010.. (original name was: 3300010299.a:Ga0129342_1001618); c00163_3300010.. (original name was: 3300010299.a:Ga0129342_1000382); c00164_3300010.. (original name was: 3300010299.a:Ga0129342_1001741); c00165_3300010.. (original name was: 3300010299.a:Ga0129342_1000105); c00166_3300010.. (original name was: 3300010299.a:Ga0129342_1000491); c00167_3300010.. (original name was: 3300010299.a:Ga0129342_1000082); c00168_3300010.. (original name was: 3300010299.a:Ga0129342_1001314); c00169_3300010.. (original name was: 3300010299.a:Ga0129342_1013917); c00170_3300010.. (original name was: 3300010299.a:Ga0129342_1009185); c00171_3300010.. (original name was: 3300010299.a:Ga0129342_1000598); c00172_3300010.. (original name was: 3300010299.a:Ga0129342_1005554); c00173_3300010.. (original name was: 3300010299.a:Ga0129342_1006993); c00174_3300010.. (original name was: 3300010299.a:Ga0129342_1004435); c00175_3300010.. (original name was: 3300010299.a:Ga0129342_1000345); c00176_3300010.. (original name was: 3300010299.a:Ga0129342_1015884); c00178_3300010.. (original name was: 3300010299.a:Ga0129342_1009366); c00179_3300010.. (original name was: 3300010299.a:Ga0129342_1002004); c00180_3300010.. (original name was: 3300010299.a:Ga0129342_1009566); c00181_3300010.. (original name was: 3300010299.a:Ga0129342_1004448); c00182_3300010.. (original name was: 3300010299.a:Ga0129342_1001955); c00183_3300010.. (original name was: 3300010299.a:Ga0129342_1002751); c00184_3300010.. (original name was: 3300010299.a:Ga0129342_1000169); c00185_3300010.. (original name was: 3300010299.a:Ga0129342_1000201); c00186_3300010.. (original name was: 3300010299.a:Ga0129342_1003064); c00187_3300010.. (original name was: 3300010299.a:Ga0129342_1009028); c00188_3300010.. (original name was: 3300010299.a:Ga0129342_1003711); c00189_3300010.. (original name was: 3300010299.a:Ga0129342_1000848); c00190_3300010.. (original name was: 3300010299.a:Ga0129342_1001686); c00191_3300010.. (original name was: 3300010299.a:Ga0129342_1000049); c00192_3300010.. (original name was: 3300010299.a:Ga0129342_1001840); c00193_3300010.. (original name was: 3300010299.a:Ga0129342_1001312); c00194_3300010.. (original name was: 3300010299.a:Ga0129342_1009894); c00195_3300010.. (original name was: 3300010299.a:Ga0129342_1014258); c00196_3300010.. (original name was: 3300010299.a:Ga0129342_1006258); c00197_3300010.. (original name was: 3300010299.a:Ga0129342_1005965); c00198_3300010.. (original name was: 3300010299.a:Ga0129342_1002905); c00199_3300010.. (original name was: 3300010299.a:Ga0129342_1012177); c00200_3300010.. (original name was: 3300010299.a:Ga0129342_1002087); c00201_3300010.. (original name was: 3300010299.a:Ga0129342_1011127); c00202_3300010.. (original name was: 3300010299.a:Ga0129342_1004800); c00203_3300010.. (original name was: 3300010299.a:Ga0129342_1000510); c00204_3300010.. (original name was: 3300010299.a:Ga0129342_1004191); c00205_3300010.. (original name was: 3300010299.a:Ga0129342_1008055); c00206_3300010.. (original name was: 3300010299.a:Ga0129342_1003080); c00207_3300010.. (original name was: 3300010299.a:Ga0129342_1002356); c00208_3300010.. (original name was: 3300010299.a:Ga0129342_1006202); c00209_3300010.. (original name was: 3300010299.a:Ga0129342_1000476); c00210_3300010.. (original name was: 3300010299.a:Ga0129342_1001670); c00211_3300010.. (original name was: 3300010299.a:Ga0129342_1002591); c00212_3300010.. (original name was: 3300010299.a:Ga0129342_1003976); c00213_3300010.. (original name was: 3300010299.a:Ga0129342_1004680); c00214_3300010.. (original name was: 3300010299.a:Ga0129342_1002226); c00215_3300010.. (original name was: 3300010299.a:Ga0129342_1002726); c00217_3300010.. (original name was: 3300010299.a:Ga0129342_1002762); c00218_3300010.. (original name was: 3300010299.a:Ga0129342_1008897); c00219_3300010.. (original name was: 3300010299.a:Ga0129342_1001649); c00220_3300010.. (original name was: 3300010299.a:Ga0129342_1007784); c00221_3300010.. (original name was: 3300010299.a:Ga0129342_1014342); c00222_3300010.. (original name was: 3300010299.a:Ga0129342_1013115); c00223_3300010.. (original name was: 3300010299.a:Ga0129342_1002616); c00224_3300010.. (original name was: 3300010299.a:Ga0129342_1010134); c00225_3300010.. (original name was: 3300010299.a:Ga0129342_1002729); c00227_3300010.. (original name was: 3300010299.a:Ga0129342_1000043); c00228_3300010.. (original name was: 3300010299.a:Ga0129342_1008223); c00229_3300010.. (original name was: 3300010299.a:Ga0129342_1004133); c00230_3300010.. (original name was: 3300010299.a:Ga0129342_1005648); c00231_3300010.. (original name was: 3300010299.a:Ga0129342_1006759)

Compact view

c00001_3300010.. - Region 1 - NRPS-like

Download region GenBank file

Location: 1 - 4,310 nt. (total: 4,310 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00002_3300010.. - Region 1 - NRPS-like,T1PKS

Download region GenBank file

Location: 1 - 5,892 nt. (total: 5,892 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 5892:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg2_1

Search NORINE for peptide: strict or relaxed

AMP-binding (32..327): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: nIyWLAASgK
Nearest Stachelhaus code:: 2-oxo-isovaleric-acid
Stachelhaus code match:: 70% (weak)

PKS_AT (1093..1387): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 75.0%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 124.8
inactive: 87.2
Methylmalonyl-CoA: 49.8
Methoxymalonyl-CoA: 49.6
Propionyl-CoA: 22.4
Benzoyl-CoA: 21.6
Isobutyryl-CoA: 16.4
Ethylmalonyl-CoA: 16.0
2-Methylbutyryl-CoA: 13.9
CHC-CoA: 12.3
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

c00003_3300010.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 1 - 15,952 nt. (total: 15,952 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 15952:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-X) + (gly - ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg3_2

Search NORINE for peptide: strict or relaxed

AMP-binding (534..930): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

PKS_AT (1641..1928): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 70.8%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 107.5
inactive: 48.1
Methoxymalonyl-CoA: 43.9
Methylmalonyl-CoA: 30.2
Propionyl-CoA: 22.4
2-Methylbutyryl-CoA: 17.9
Benzoyl-CoA: 12.9
Ethylmalonyl-CoA: 10.7
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg3_3

Search NORINE for peptide: strict or relaxed

AMP-binding (717..1109): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVGvIGeVmK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 70% (weak)

c00004_3300010.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 1 - 16,975 nt. (total: 16,975 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 16975:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal) + (mal - asn)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg4_2

Search NORINE for peptide: strict or relaxed

PKS_AT (568..853): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 107.9
inactive: 73.9
Methylmalonyl-CoA: 70.7
Methoxymalonyl-CoA: 67.1
Propionyl-CoA: 51.3
Ethylmalonyl-CoA: 48.6
Isobutyryl-CoA: 44.0
2-Methylbutyryl-CoA: 32.6
Acetyl-CoA: 19.4
CHC-CoA: 19.3
Benzoyl-CoA: 19.1
fatty_acid: 18.9
trans-1,2-CPDA: 11.5
3-Methylbutyryl-CoA: 9.0

AMP-binding (2413..2820): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DApKVGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

ctg4_3

PKS_AT (572..867): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 75.0%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 152.2
inactive: 73.7
Methoxymalonyl-CoA: 72.1
Methylmalonyl-CoA: 63.7
Propionyl-CoA: 48.5
Ethylmalonyl-CoA: 35.0
Isobutyryl-CoA: 34.3
fatty_acid: 24.6
Benzoyl-CoA: 24.2
2-Methylbutyryl-CoA: 24.1
CHC-CoA: 23.1
Acetyl-CoA: 22.2
3-Methylbutyryl-CoA: 18.9
trans-1,2-CPDA: 18.6

c00005_3300010.. - Region 1 - NRPS-like,T1PKS

Download region GenBank file

Location: 1 - 24,084 nt. (total: 24,084 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 24084:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal) + (ccmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg5_14

CAL_domain (0..274): pk

minowa: NH2

Prediction, score:

NH2: 106.1
Acetyl-CoA: 65.4
fatty_acid: 29.9
AHBA: 11.7
shikimic_acid: 0.0

PKS_AT (1000..1282): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 70.8%; Propionyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 99.0
Methoxymalonyl-CoA: 51.6
inactive: 45.6
Methylmalonyl-CoA: 41.6
Propionyl-CoA: 24.6
Ethylmalonyl-CoA: 23.9
2-Methylbutyryl-CoA: 20.6
CHC-CoA: 15.7
Benzoyl-CoA: 12.4
trans-1,2-CPDA: 10.5
Isobutyryl-CoA: 10.3
fatty_acid: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg5_15

PKS_AT (569..857): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 138.5
Methoxymalonyl-CoA: 80.9
Methylmalonyl-CoA: 71.3
inactive: 69.6
Propionyl-CoA: 51.0
Ethylmalonyl-CoA: 34.5
fatty_acid: 22.2
Isobutyryl-CoA: 19.9
Acetyl-CoA: 18.0
CHC-CoA: 15.5
2-Methylbutyryl-CoA: 14.4
trans-1,2-CPDA: 14.3
Benzoyl-CoA: 10.8
3-Methylbutyryl-CoA: 9.7

c00091_3300010.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 1 - 27,006 nt. (total: 27,006 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27006:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn) + (pk) + (thr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg91_1

Search NORINE for peptide: strict or relaxed

AMP-binding (534..940): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

ctg91_2

PKS_AT (531..807): pk

ATSignature: (unknown)

No matches above 50%

minowa: inactive

Prediction, score:

inactive: 30.6
Propionyl-CoA: 14.2
Malonyl-CoA: 13.7
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Methylmalonyl-CoA: 0.0
Methoxymalonyl-CoA: 0.0
Isobutyryl-CoA: 0.0
Ethylmalonyl-CoA: 0.0
CHC-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ctg91_3

Search NORINE for peptide: strict or relaxed

AMP-binding (1123..1521): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DATKVGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

ctg91_9

PKS_AT (176..498): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 66.7%; inactive: 62.5%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 89.2
inactive: 52.8
Methoxymalonyl-CoA: 46.4
Methylmalonyl-CoA: 37.2
Propionyl-CoA: 29.9
Ethylmalonyl-CoA: 16.7
3-Methylbutyryl-CoA: 15.3
Benzoyl-CoA: 10.1
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
CHC-CoA: 0.0
Acetyl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

c00123_3300010.. - Region 1 - NRPS,bacteriocin

Download region GenBank file

Location: 1 - 4,587 nt. (total: 4,587 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00177_3300010.. - Region 1 - betalactone

Download region GenBank file

Location: 1 - 25,408 nt. (total: 25,408 nt) Show pHMM detection rules used

Region on contig edge.

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

c00216_3300010.. - Region 1 - T1PKS

Download region GenBank file

Location: 1 - 7,321 nt. (total: 7,321 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00226_3300010.. - Region 1 - bacteriocin

Download region GenBank file

Location: 1 - 6,463 nt. (total: 6,463 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

c00232_3300010.. - Region 1 - terpene

Download region GenBank file

Location: 1 - 4,521 nt. (total: 4,521 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it