3300011636_2 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00036_3300011.. (original name was: 3300011636.a:Ga0122285_100225)

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	NRPS	1	25,925

c00044_3300011.. (original name was: 3300011636.a:Ga0122285_100109)

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	NRPS	25,600	56,524

c00046_3300011.. (original name was: 3300011636.a:Ga0122285_100019)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	resorcinol,arylpolyene	160,081	189,556

c00068_3300011.. (original name was: 3300011636.a:Ga0122285_100024)

Region	Type	From	To	Most similar known cluster		Similarity
Region 68.1	NAGGN	146,782	161,837

c00073_3300011.. (original name was: 3300011636.a:Ga0122285_100004)

Region	Type	From	To	Most similar known cluster		Similarity
Region 73.1	terpene	150,952	174,603

Region	Type	From	To	Similarity
Region 36.1	NRPS	1	25,925
Region 44.1	NRPS	25,600	56,524
Region 46.1	resorcinol,arylpolyene	160,081	189,556
Region 68.1	NAGGN	146,782	161,837
Region 73.1	terpene	150,952	174,603

No secondary metabolite regions were found in these records:: c00001_3300011.. (original name was: 3300011636.a:Ga0122285_100600); c00002_3300011.. (original name was: 3300011636.a:Ga0122285_100596); c00003_3300011.. (original name was: 3300011636.a:Ga0122285_100065); c00004_3300011.. (original name was: 3300011636.a:Ga0122285_100055); c00005_3300011.. (original name was: 3300011636.a:Ga0122285_100168); c00006_3300011.. (original name was: 3300011636.a:Ga0122285_100058); c00007_3300011.. (original name was: 3300011636.a:Ga0122285_100436); c00008_3300011.. (original name was: 3300011636.a:Ga0122285_100372); c00009_3300011.. (original name was: 3300011636.a:Ga0122285_100086); c00010_3300011.. (original name was: 3300011636.a:Ga0122285_100101); c00011_3300011.. (original name was: 3300011636.a:Ga0122285_100161); c00012_3300011.. (original name was: 3300011636.a:Ga0122285_100268); c00013_3300011.. (original name was: 3300011636.a:Ga0122285_100317); c00014_3300011.. (original name was: 3300011636.a:Ga0122285_100256); c00015_3300011.. (original name was: 3300011636.a:Ga0122285_100031); c00016_3300011.. (original name was: 3300011636.a:Ga0122285_100029); c00017_3300011.. (original name was: 3300011636.a:Ga0122285_100127); c00018_3300011.. (original name was: 3300011636.a:Ga0122285_100077); c00019_3300011.. (original name was: 3300011636.a:Ga0122285_100139); c00020_3300011.. (original name was: 3300011636.a:Ga0122285_100318); c00021_3300011.. (original name was: 3300011636.a:Ga0122285_100008); c00022_3300011.. (original name was: 3300011636.a:Ga0122285_100047); c00023_3300011.. (original name was: 3300011636.a:Ga0122285_100314); c00024_3300011.. (original name was: 3300011636.a:Ga0122285_100087); c00025_3300011.. (original name was: 3300011636.a:Ga0122285_100238); c00026_3300011.. (original name was: 3300011636.a:Ga0122285_100462); c00027_3300011.. (original name was: 3300011636.a:Ga0122285_100118); c00028_3300011.. (original name was: 3300011636.a:Ga0122285_100034); c00029_3300011.. (original name was: 3300011636.a:Ga0122285_100117); c00030_3300011.. (original name was: 3300011636.a:Ga0122285_100402); c00031_3300011.. (original name was: 3300011636.a:Ga0122285_100434); c00032_3300011.. (original name was: 3300011636.a:Ga0122285_100140); c00033_3300011.. (original name was: 3300011636.a:Ga0122285_100085); c00034_3300011.. (original name was: 3300011636.a:Ga0122285_100045); c00035_3300011.. (original name was: 3300011636.a:Ga0122285_100390); c00037_3300011.. (original name was: 3300011636.a:Ga0122285_100262); c00038_3300011.. (original name was: 3300011636.a:Ga0122285_100022); c00039_3300011.. (original name was: 3300011636.a:Ga0122285_100437); c00040_3300011.. (original name was: 3300011636.a:Ga0122285_100223); c00041_3300011.. (original name was: 3300011636.a:Ga0122285_100150); c00042_3300011.. (original name was: 3300011636.a:Ga0122285_100424); c00043_3300011.. (original name was: 3300011636.a:Ga0122285_100346); c00045_3300011.. (original name was: 3300011636.a:Ga0122285_100386); c00047_3300011.. (original name was: 3300011636.a:Ga0122285_100290); c00048_3300011.. (original name was: 3300011636.a:Ga0122285_100442); c00049_3300011.. (original name was: 3300011636.a:Ga0122285_100232); c00050_3300011.. (original name was: 3300011636.a:Ga0122285_100428); c00051_3300011.. (original name was: 3300011636.a:Ga0122285_100348); c00052_3300011.. (original name was: 3300011636.a:Ga0122285_100230); c00053_3300011.. (original name was: 3300011636.a:Ga0122285_100275); c00054_3300011.. (original name was: 3300011636.a:Ga0122285_100292); c00055_3300011.. (original name was: 3300011636.a:Ga0122285_100385); c00056_3300011.. (original name was: 3300011636.a:Ga0122285_100136); c00057_3300011.. (original name was: 3300011636.a:Ga0122285_100075); c00058_3300011.. (original name was: 3300011636.a:Ga0122285_100074); c00059_3300011.. (original name was: 3300011636.a:Ga0122285_100160); c00060_3300011.. (original name was: 3300011636.a:Ga0122285_100134); c00061_3300011.. (original name was: 3300011636.a:Ga0122285_100303); c00062_3300011.. (original name was: 3300011636.a:Ga0122285_100010); c00063_3300011.. (original name was: 3300011636.a:Ga0122285_100457); c00064_3300011.. (original name was: 3300011636.a:Ga0122285_100016); c00065_3300011.. (original name was: 3300011636.a:Ga0122285_100191); c00066_3300011.. (original name was: 3300011636.a:Ga0122285_100141); c00067_3300011.. (original name was: 3300011636.a:Ga0122285_100274); c00069_3300011.. (original name was: 3300011636.a:Ga0122285_100051); c00070_3300011.. (original name was: 3300011636.a:Ga0122285_100102); c00071_3300011.. (original name was: 3300011636.a:Ga0122285_100057); c00072_3300011.. (original name was: 3300011636.a:Ga0122285_100049); c00074_3300011.. (original name was: 3300011636.a:Ga0122285_100258); c00075_3300011.. (original name was: 3300011636.a:Ga0122285_100162); c00076_3300011.. (original name was: 3300011636.a:Ga0122285_100170); c00077_3300011.. (original name was: 3300011636.a:Ga0122285_100193); c00078_3300011.. (original name was: 3300011636.a:Ga0122285_100025)

Compact view

c00036_3300011.. - Region 1 - NRPS

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Location: 1 - 25,925 nt. (total: 25,925 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 25925:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asp) + (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg36_11

Search NORINE for peptide: strict or relaxed

AMP-binding (513..897): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKVGHVGK
Nearest Stachelhaus code:: asp
Stachelhaus code match:: 100% (strong)

ctg36_12

Search NORINE for peptide: strict or relaxed

AMP-binding (510..914): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeLtadDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 50% (weak)

AMP-binding (1560..1952): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DIvQiGgVyK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 60% (weak)

AMP-binding (2606..2996): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DmpQLGaVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 70% (weak)

c00044_3300011.. - Region 1 - NRPS

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Location: 25,600 - 56,524 nt. (total: 30,925 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 25599 - 56524:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asp - gly) + (asp)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg44_47

Search NORINE for peptide: strict or relaxed

AMP-binding (421..810): asp

NRPSPredictor2: asp

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKVGHVGK
Nearest Stachelhaus code:: asp
Stachelhaus code match:: 100% (strong)

ctg44_48

Search NORINE for peptide: strict or relaxed

AMP-binding (13..278): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKVGHVGK
Nearest Stachelhaus code:: asp
Stachelhaus code match:: 100% (strong)

AMP-binding (1000..1390): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVvWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

c00046_3300011.. - Region 1 - arylpolyene,resorcinol

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Location: 160,081 - 189,556 nt. (total: 29,476 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB
arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00068_3300011.. - Region 1 - NAGGN

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Location: 146,782 - 161,837 nt. (total: 15,056 nt) Show pHMM detection rules used

NAGGN: ((TIGR03104 or cds(GATase_7 and Asn_synthase)) and TIGR03103 and (TIGR03106 or Peptidase_M42))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00073_3300011.. - Region 1 - terpene

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Location: 150,952 - 174,603 nt. (total: 23,652 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it