3300012802_4 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00058_3300012.. (original name was: 3300012802.a:Ga0160499_100033)

Region	Type	From	To	Most similar known cluster		Similarity
Region 58.1	bacteriocin	80,318	90,554

c00114_3300012.. (original name was: 3300012802.a:Ga0160499_100131)

Region	Type	From	To	Most similar known cluster		Similarity
Region 114.1	NRPS	30,083	73,484

c00115_3300012.. (original name was: 3300012802.a:Ga0160499_100213)

Region	Type	From	To	Most similar known cluster		Similarity
Region 115.1	lassopeptide	26,776	47,781

c00120_3300012.. (original name was: 3300012802.a:Ga0160499_100283)

Region	Type	From	To	Most similar known cluster		Similarity
Region 120.1	terpene	2,920	23,789

Region	Type	From	To	Similarity
Region 58.1	bacteriocin	80,318	90,554
Region 114.1	NRPS	30,083	73,484
Region 115.1	lassopeptide	26,776	47,781
Region 120.1	terpene	2,920	23,789

No secondary metabolite regions were found in these records:: c00001_3300012.. (original name was: 3300012802.a:Ga0160499_102529); c00002_3300012.. (original name was: 3300012802.a:Ga0160499_102007); c00003_3300012.. (original name was: 3300012802.a:Ga0160499_100505); c00004_3300012.. (original name was: 3300012802.a:Ga0160499_101212); c00005_3300012.. (original name was: 3300012802.a:Ga0160499_100018); c00006_3300012.. (original name was: 3300012802.a:Ga0160499_100351); c00007_3300012.. (original name was: 3300012802.a:Ga0160499_100210); c00008_3300012.. (original name was: 3300012802.a:Ga0160499_100072); c00009_3300012.. (original name was: 3300012802.a:Ga0160499_100473); c00010_3300012.. (original name was: 3300012802.a:Ga0160499_100634); c00011_3300012.. (original name was: 3300012802.a:Ga0160499_100069); c00012_3300012.. (original name was: 3300012802.a:Ga0160499_100268); c00013_3300012.. (original name was: 3300012802.a:Ga0160499_100101); c00014_3300012.. (original name was: 3300012802.a:Ga0160499_100134); c00015_3300012.. (original name was: 3300012802.a:Ga0160499_100802); c00016_3300012.. (original name was: 3300012802.a:Ga0160499_100301); c00017_3300012.. (original name was: 3300012802.a:Ga0160499_100224); c00018_3300012.. (original name was: 3300012802.a:Ga0160499_100755); c00019_3300012.. (original name was: 3300012802.a:Ga0160499_100546); c00020_3300012.. (original name was: 3300012802.a:Ga0160499_100123); c00021_3300012.. (original name was: 3300012802.a:Ga0160499_100290); c00022_3300012.. (original name was: 3300012802.a:Ga0160499_100100); c00023_3300012.. (original name was: 3300012802.a:Ga0160499_100267); c00024_3300012.. (original name was: 3300012802.a:Ga0160499_101474); c00025_3300012.. (original name was: 3300012802.a:Ga0160499_101275); c00026_3300012.. (original name was: 3300012802.a:Ga0160499_101401); c00027_3300012.. (original name was: 3300012802.a:Ga0160499_101038); c00028_3300012.. (original name was: 3300012802.a:Ga0160499_101148); c00029_3300012.. (original name was: 3300012802.a:Ga0160499_100389); c00030_3300012.. (original name was: 3300012802.a:Ga0160499_100421); c00031_3300012.. (original name was: 3300012802.a:Ga0160499_100222); c00032_3300012.. (original name was: 3300012802.a:Ga0160499_100103); c00033_3300012.. (original name was: 3300012802.a:Ga0160499_100044); c00034_3300012.. (original name was: 3300012802.a:Ga0160499_100626); c00035_3300012.. (original name was: 3300012802.a:Ga0160499_100157); c00036_3300012.. (original name was: 3300012802.a:Ga0160499_100314); c00037_3300012.. (original name was: 3300012802.a:Ga0160499_100513); c00038_3300012.. (original name was: 3300012802.a:Ga0160499_100110); c00039_3300012.. (original name was: 3300012802.a:Ga0160499_100707); c00040_3300012.. (original name was: 3300012802.a:Ga0160499_100906); c00041_3300012.. (original name was: 3300012802.a:Ga0160499_101197); c00042_3300012.. (original name was: 3300012802.a:Ga0160499_100342); c00043_3300012.. (original name was: 3300012802.a:Ga0160499_100162); c00044_3300012.. (original name was: 3300012802.a:Ga0160499_100169); c00045_3300012.. (original name was: 3300012802.a:Ga0160499_100181); c00046_3300012.. (original name was: 3300012802.a:Ga0160499_100902); c00047_3300012.. (original name was: 3300012802.a:Ga0160499_101897); c00048_3300012.. (original name was: 3300012802.a:Ga0160499_100252); c00049_3300012.. (original name was: 3300012802.a:Ga0160499_101177); c00050_3300012.. (original name was: 3300012802.a:Ga0160499_100381); c00051_3300012.. (original name was: 3300012802.a:Ga0160499_101033); c00052_3300012.. (original name was: 3300012802.a:Ga0160499_100557); c00053_3300012.. (original name was: 3300012802.a:Ga0160499_100159); c00054_3300012.. (original name was: 3300012802.a:Ga0160499_100801); c00055_3300012.. (original name was: 3300012802.a:Ga0160499_101199); c00056_3300012.. (original name was: 3300012802.a:Ga0160499_100617); c00057_3300012.. (original name was: 3300012802.a:Ga0160499_100591); c00059_3300012.. (original name was: 3300012802.a:Ga0160499_101227); c00060_3300012.. (original name was: 3300012802.a:Ga0160499_100829); c00061_3300012.. (original name was: 3300012802.a:Ga0160499_100402); c00062_3300012.. (original name was: 3300012802.a:Ga0160499_100093); c00063_3300012.. (original name was: 3300012802.a:Ga0160499_100292); c00064_3300012.. (original name was: 3300012802.a:Ga0160499_101889); c00065_3300012.. (original name was: 3300012802.a:Ga0160499_100098); c00066_3300012.. (original name was: 3300012802.a:Ga0160499_100295); c00067_3300012.. (original name was: 3300012802.a:Ga0160499_100693); c00068_3300012.. (original name was: 3300012802.a:Ga0160499_101091); c00069_3300012.. (original name was: 3300012802.a:Ga0160499_100730); c00070_3300012.. (original name was: 3300012802.a:Ga0160499_100332); c00071_3300012.. (original name was: 3300012802.a:Ga0160499_100525); c00072_3300012.. (original name was: 3300012802.a:Ga0160499_100354); c00073_3300012.. (original name was: 3300012802.a:Ga0160499_101548); c00074_3300012.. (original name was: 3300012802.a:Ga0160499_100155); c00075_3300012.. (original name was: 3300012802.a:Ga0160499_100553); c00076_3300012.. (original name was: 3300012802.a:Ga0160499_100318); c00077_3300012.. (original name was: 3300012802.a:Ga0160499_102041); c00078_3300012.. (original name was: 3300012802.a:Ga0160499_100250); c00079_3300012.. (original name was: 3300012802.a:Ga0160499_100388); c00080_3300012.. (original name was: 3300012802.a:Ga0160499_100272); c00081_3300012.. (original name was: 3300012802.a:Ga0160499_100670); c00082_3300012.. (original name was: 3300012802.a:Ga0160499_100471); c00083_3300012.. (original name was: 3300012802.a:Ga0160499_100310); c00084_3300012.. (original name was: 3300012802.a:Ga0160499_100095); c00085_3300012.. (original name was: 3300012802.a:Ga0160499_101886); c00086_3300012.. (original name was: 3300012802.a:Ga0160499_100183); c00087_3300012.. (original name was: 3300012802.a:Ga0160499_100382); c00088_3300012.. (original name was: 3300012802.a:Ga0160499_100173); c00089_3300012.. (original name was: 3300012802.a:Ga0160499_100398); c00090_3300012.. (original name was: 3300012802.a:Ga0160499_100163); c00091_3300012.. (original name was: 3300012802.a:Ga0160499_100046); c00092_3300012.. (original name was: 3300012802.a:Ga0160499_100842); c00093_3300012.. (original name was: 3300012802.a:Ga0160499_100503); c00094_3300012.. (original name was: 3300012802.a:Ga0160499_100186); c00095_3300012.. (original name was: 3300012802.a:Ga0160499_100385); c00096_3300012.. (original name was: 3300012802.a:Ga0160499_100870); c00097_3300012.. (original name was: 3300012802.a:Ga0160499_100288); c00098_3300012.. (original name was: 3300012802.a:Ga0160499_100487); c00099_3300012.. (original name was: 3300012802.a:Ga0160499_100099); c00100_3300012.. (original name was: 3300012802.a:Ga0160499_100196); c00101_3300012.. (original name was: 3300012802.a:Ga0160499_101005); c00102_3300012.. (original name was: 3300012802.a:Ga0160499_100806); c00103_3300012.. (original name was: 3300012802.a:Ga0160499_100154); c00104_3300012.. (original name was: 3300012802.a:Ga0160499_100878); c00105_3300012.. (original name was: 3300012802.a:Ga0160499_100082); c00106_3300012.. (original name was: 3300012802.a:Ga0160499_100639); c00107_3300012.. (original name was: 3300012802.a:Ga0160499_101634); c00108_3300012.. (original name was: 3300012802.a:Ga0160499_100178); c00109_3300012.. (original name was: 3300012802.a:Ga0160499_100464); c00110_3300012.. (original name was: 3300012802.a:Ga0160499_100663); c00111_3300012.. (original name was: 3300012802.a:Ga0160499_101229); c00112_3300012.. (original name was: 3300012802.a:Ga0160499_100632); c00113_3300012.. (original name was: 3300012802.a:Ga0160499_100341); c00116_3300012.. (original name was: 3300012802.a:Ga0160499_100810); c00117_3300012.. (original name was: 3300012802.a:Ga0160499_100187); c00118_3300012.. (original name was: 3300012802.a:Ga0160499_101580); c00119_3300012.. (original name was: 3300012802.a:Ga0160499_100784); c00121_3300012.. (original name was: 3300012802.a:Ga0160499_101724); c00122_3300012.. (original name was: 3300012802.a:Ga0160499_100530); c00123_3300012.. (original name was: 3300012802.a:Ga0160499_100484); c00124_3300012.. (original name was: 3300012802.a:Ga0160499_100323); c00125_3300012.. (original name was: 3300012802.a:Ga0160499_100226); c00126_3300012.. (original name was: 3300012802.a:Ga0160499_100461); c00127_3300012.. (original name was: 3300012802.a:Ga0160499_100120); c00128_3300012.. (original name was: 3300012802.a:Ga0160499_100114); c00129_3300012.. (original name was: 3300012802.a:Ga0160499_100057); c00130_3300012.. (original name was: 3300012802.a:Ga0160499_100455); c00131_3300012.. (original name was: 3300012802.a:Ga0160499_100117); c00132_3300012.. (original name was: 3300012802.a:Ga0160499_101510); c00133_3300012.. (original name was: 3300012802.a:Ga0160499_100346); c00134_3300012.. (original name was: 3300012802.a:Ga0160499_100393); c00135_3300012.. (original name was: 3300012802.a:Ga0160499_100432); c00136_3300012.. (original name was: 3300012802.a:Ga0160499_101228); c00137_3300012.. (original name was: 3300012802.a:Ga0160499_100797); c00138_3300012.. (original name was: 3300012802.a:Ga0160499_100476); c00139_3300012.. (original name was: 3300012802.a:Ga0160499_101670); c00140_3300012.. (original name was: 3300012802.a:Ga0160499_101146); c00141_3300012.. (original name was: 3300012802.a:Ga0160499_100691); c00142_3300012.. (original name was: 3300012802.a:Ga0160499_100577)

Compact view

c00058_3300012.. - Region 1 - bacteriocin

Download region GenBank file

Location: 80,318 - 90,554 nt. (total: 10,237 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00114_3300012.. - Region 1 - NRPS

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Location: 30,083 - 73,484 nt. (total: 43,402 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 30082 - 73484:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser) + (asp)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg114_45

Search NORINE for peptide: strict or relaxed

AMP-binding (10..412): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWqFcLVfK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 70% (weak)

ctg114_47

Search NORINE for peptide: strict or relaxed

AMP-binding (451..859): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLpKIahVsK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 60% (weak)

c00115_3300012.. - Region 1 - lassopeptide

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Location: 26,776 - 47,781 nt. (total: 21,006 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lasso peptides

Lasso peptide predictions

Lassopeptide(s) for ctg115_43 - Putative Class II

ctg115_43 leader / core peptide / cleaved tail: MTLKKEWSKPELEVLQVHMTEASTT - NGPLTDEAYVPGQYSENPRFTS

Legend:

Red: Putative macrolactam
Purple: Putative cleaved off residues

Lasso peptides

Core peptide predictions

ctg115_43 - Class II: Cleavage pHMM score: -9.20; RODEO score: 15; Monoisotopic mass: 2423.1 Da; Molecular weight: 2424.5 Da; Number of bridges: 0

c00120_3300012.. - Region 1 - terpene

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Location: 2,920 - 23,789 nt. (total: 20,870 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it