3300012834_2 - 22 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00002_3300012.. (original name was: 3300012834.a:Ga0160452_102712)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	NRPS	1	3,546

c00009_3300012.. (original name was: 3300012834.a:Ga0160452_100450)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	NRPS,transAT-PKS	1	28,568

c00039_3300012.. (original name was: 3300012834.a:Ga0160452_102032)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	NRPS	1	4,751

c00062_3300012.. (original name was: 3300012834.a:Ga0160452_100304)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	terpene	25,199	44,680

c00065_3300012.. (original name was: 3300012834.a:Ga0160452_100135)

Region	Type	From	To	Most similar known cluster		Similarity
Region 65.1	NRPS	1	27,832

c00076_3300012.. (original name was: 3300012834.a:Ga0160452_100190)

Region	Type	From	To	Most similar known cluster		Similarity
Region 76.1	T3PKS	33,214	69,016

c00100_3300012.. (original name was: 3300012834.a:Ga0160452_101051)

Region	Type	From	To	Most similar known cluster		Similarity
Region 100.1	NRPS	1	9,689

c00104_3300012.. (original name was: 3300012834.a:Ga0160452_100374)

Region	Type	From	To	Most similar known cluster		Similarity
Region 104.1	NRPS-like	13,573	36,678

c00119_3300012.. (original name was: 3300012834.a:Ga0160452_100420)

Region	Type	From	To	Most similar known cluster		Similarity
Region 119.1	terpene	2,435	23,184

c00137_3300012.. (original name was: 3300012834.a:Ga0160452_100416)

Region	Type	From	To	Most similar known cluster		Similarity
Region 137.1	NRPS-like	1	23,968

c00153_3300012.. (original name was: 3300012834.a:Ga0160452_100229)

Region	Type	From	To	Most similar known cluster		Similarity
Region 153.1	NRPS,T1PKS	1	57,287

c00164_3300012.. (original name was: 3300012834.a:Ga0160452_100154)

Region	Type	From	To	Most similar known cluster		Similarity
Region 164.1	transAT-PKS-like,NRPS	3	24,786
Region 164.2	transAT-PKS,NRPS	44,474	80,626

c00165_3300012.. (original name was: 3300012834.a:Ga0160452_100563)

Region	Type	From	To	Most similar known cluster		Similarity
Region 165.1	ectoine	12,904	21,495

c00168_3300012.. (original name was: 3300012834.a:Ga0160452_100068)

Region	Type	From	To	Most similar known cluster		Similarity
Region 168.1	NRPS	67,917	140,253

c00169_3300012.. (original name was: 3300012834.a:Ga0160452_100364)

Region	Type	From	To	Most similar known cluster		Similarity
Region 169.1	ladderane	1	33,704

c00180_3300012.. (original name was: 3300012834.a:Ga0160452_100413)

Region	Type	From	To	Most similar known cluster		Similarity
Region 180.1	resorcinol	1	28,398

c00191_3300012.. (original name was: 3300012834.a:Ga0160452_101249)

Region	Type	From	To	Most similar known cluster		Similarity
Region 191.1	NRPS	1	7,971

c00193_3300012.. (original name was: 3300012834.a:Ga0160452_100500)

Region	Type	From	To	Most similar known cluster		Similarity
Region 193.1	bacteriocin	12,165	22,407

c00212_3300012.. (original name was: 3300012834.a:Ga0160452_100194)

Region	Type	From	To	Most similar known cluster		Similarity
Region 212.1	terpene	15,441	37,339

c00237_3300012.. (original name was: 3300012834.a:Ga0160452_101563)

Region	Type	From	To	Most similar known cluster		Similarity
Region 237.1	transAT-PKS-like	1	6,294

c00257_3300012.. (original name was: 3300012834.a:Ga0160452_100406)

Region	Type	From	To	Most similar known cluster		Similarity
Region 257.1	NRPS	2,249	33,664

Region	Type	From	To	Similarity
Region 2.1	NRPS	1	3,546
Region 9.1	NRPS,transAT-PKS	1	28,568
Region 39.1	NRPS	1	4,751
Region 62.1	terpene	25,199	44,680
Region 65.1	NRPS	1	27,832
Region 76.1	T3PKS	33,214	69,016
Region 100.1	NRPS	1	9,689
Region 104.1	NRPS-like	13,573	36,678
Region 119.1	terpene	2,435	23,184
Region 137.1	NRPS-like	1	23,968
Region 153.1	NRPS,T1PKS	1	57,287
Region 164.1	transAT-PKS-like,NRPS	3	24,786
Region 164.2	transAT-PKS,NRPS	44,474	80,626
Region 165.1	ectoine	12,904	21,495
Region 168.1	NRPS	67,917	140,253
Region 169.1	ladderane	1	33,704
Region 180.1	resorcinol	1	28,398
Region 191.1	NRPS	1	7,971
Region 193.1	bacteriocin	12,165	22,407
Region 212.1	terpene	15,441	37,339
Region 237.1	transAT-PKS-like	1	6,294
Region 257.1	NRPS	2,249	33,664

No secondary metabolite regions were found in these records:: c00001_3300012.. (original name was: 3300012834.a:Ga0160452_102794); c00003_3300012.. (original name was: 3300012834.a:Ga0160452_102504); c00004_3300012.. (original name was: 3300012834.a:Ga0160452_102313); c00005_3300012.. (original name was: 3300012834.a:Ga0160452_102109); c00006_3300012.. (original name was: 3300012834.a:Ga0160452_101511); c00007_3300012.. (original name was: 3300012834.a:Ga0160452_100577); c00008_3300012.. (original name was: 3300012834.a:Ga0160452_100475); c00010_3300012.. (original name was: 3300012834.a:Ga0160452_100338); c00011_3300012.. (original name was: 3300012834.a:Ga0160452_100685); c00012_3300012.. (original name was: 3300012834.a:Ga0160452_101406); c00013_3300012.. (original name was: 3300012834.a:Ga0160452_101069); c00014_3300012.. (original name was: 3300012834.a:Ga0160452_101165); c00015_3300012.. (original name was: 3300012834.a:Ga0160452_100280); c00016_3300012.. (original name was: 3300012834.a:Ga0160452_100479); c00017_3300012.. (original name was: 3300012834.a:Ga0160452_102262); c00018_3300012.. (original name was: 3300012834.a:Ga0160452_100378); c00019_3300012.. (original name was: 3300012834.a:Ga0160452_100973); c00020_3300012.. (original name was: 3300012834.a:Ga0160452_100632); c00021_3300012.. (original name was: 3300012834.a:Ga0160452_100466); c00022_3300012.. (original name was: 3300012834.a:Ga0160452_100951); c00023_3300012.. (original name was: 3300012834.a:Ga0160452_101892); c00024_3300012.. (original name was: 3300012834.a:Ga0160452_100437); c00025_3300012.. (original name was: 3300012834.a:Ga0160452_100100); c00026_3300012.. (original name was: 3300012834.a:Ga0160452_100933); c00027_3300012.. (original name was: 3300012834.a:Ga0160452_100447); c00028_3300012.. (original name was: 3300012834.a:Ga0160452_102132); c00029_3300012.. (original name was: 3300012834.a:Ga0160452_100110); c00030_3300012.. (original name was: 3300012834.a:Ga0160452_100367); c00031_3300012.. (original name was: 3300012834.a:Ga0160452_100362); c00032_3300012.. (original name was: 3300012834.a:Ga0160452_100409); c00033_3300012.. (original name was: 3300012834.a:Ga0160452_100736); c00034_3300012.. (original name was: 3300012834.a:Ga0160452_100327); c00035_3300012.. (original name was: 3300012834.a:Ga0160452_100172); c00036_3300012.. (original name was: 3300012834.a:Ga0160452_100446); c00037_3300012.. (original name was: 3300012834.a:Ga0160452_100349); c00038_3300012.. (original name was: 3300012834.a:Ga0160452_100686); c00040_3300012.. (original name was: 3300012834.a:Ga0160452_100396); c00041_3300012.. (original name was: 3300012834.a:Ga0160452_100733); c00042_3300012.. (original name was: 3300012834.a:Ga0160452_100452); c00043_3300012.. (original name was: 3300012834.a:Ga0160452_101800); c00044_3300012.. (original name was: 3300012834.a:Ga0160452_100161); c00045_3300012.. (original name was: 3300012834.a:Ga0160452_100907); c00046_3300012.. (original name was: 3300012834.a:Ga0160452_100498); c00047_3300012.. (original name was: 3300012834.a:Ga0160452_100150); c00048_3300012.. (original name was: 3300012834.a:Ga0160452_100679); c00049_3300012.. (original name was: 3300012834.a:Ga0160452_100613); c00050_3300012.. (original name was: 3300012834.a:Ga0160452_100262); c00051_3300012.. (original name was: 3300012834.a:Ga0160452_102650); c00052_3300012.. (original name was: 3300012834.a:Ga0160452_100332); c00053_3300012.. (original name was: 3300012834.a:Ga0160452_100235); c00054_3300012.. (original name was: 3300012834.a:Ga0160452_102822); c00055_3300012.. (original name was: 3300012834.a:Ga0160452_101230); c00056_3300012.. (original name was: 3300012834.a:Ga0160452_100382); c00057_3300012.. (original name was: 3300012834.a:Ga0160452_101501); c00058_3300012.. (original name was: 3300012834.a:Ga0160452_100683); c00059_3300012.. (original name was: 3300012834.a:Ga0160452_100188); c00060_3300012.. (original name was: 3300012834.a:Ga0160452_100862); c00061_3300012.. (original name was: 3300012834.a:Ga0160452_100265); c00063_3300012.. (original name was: 3300012834.a:Ga0160452_100503); c00064_3300012.. (original name was: 3300012834.a:Ga0160452_100931); c00066_3300012.. (original name was: 3300012834.a:Ga0160452_102125); c00067_3300012.. (original name was: 3300012834.a:Ga0160452_101748); c00068_3300012.. (original name was: 3300012834.a:Ga0160452_100289); c00069_3300012.. (original name was: 3300012834.a:Ga0160452_101728); c00070_3300012.. (original name was: 3300012834.a:Ga0160452_100136); c00071_3300012.. (original name was: 3300012834.a:Ga0160452_100096); c00072_3300012.. (original name was: 3300012834.a:Ga0160452_100494); c00073_3300012.. (original name was: 3300012834.a:Ga0160452_100892); c00074_3300012.. (original name was: 3300012834.a:Ga0160452_100397); c00075_3300012.. (original name was: 3300012834.a:Ga0160452_100795); c00077_3300012.. (original name was: 3300012834.a:Ga0160452_100291); c00078_3300012.. (original name was: 3300012834.a:Ga0160452_100700); c00079_3300012.. (original name was: 3300012834.a:Ga0160452_100899); c00080_3300012.. (original name was: 3300012834.a:Ga0160452_101065); c00081_3300012.. (original name was: 3300012834.a:Ga0160452_100353); c00082_3300012.. (original name was: 3300012834.a:Ga0160452_100751); c00083_3300012.. (original name was: 3300012834.a:Ga0160452_101366); c00084_3300012.. (original name was: 3300012834.a:Ga0160452_100548); c00085_3300012.. (original name was: 3300012834.a:Ga0160452_100139); c00086_3300012.. (original name was: 3300012834.a:Ga0160452_101532); c00087_3300012.. (original name was: 3300012834.a:Ga0160452_100465); c00088_3300012.. (original name was: 3300012834.a:Ga0160452_100171); c00089_3300012.. (original name was: 3300012834.a:Ga0160452_100348); c00090_3300012.. (original name was: 3300012834.a:Ga0160452_101166); c00091_3300012.. (original name was: 3300012834.a:Ga0160452_100569); c00092_3300012.. (original name was: 3300012834.a:Ga0160452_101387); c00093_3300012.. (original name was: 3300012834.a:Ga0160452_100392); c00094_3300012.. (original name was: 3300012834.a:Ga0160452_100193); c00095_3300012.. (original name was: 3300012834.a:Ga0160452_100344); c00096_3300012.. (original name was: 3300012834.a:Ga0160452_100538); c00097_3300012.. (original name was: 3300012834.a:Ga0160452_100625); c00098_3300012.. (original name was: 3300012834.a:Ga0160452_100426); c00099_3300012.. (original name was: 3300012834.a:Ga0160452_100317); c00101_3300012.. (original name was: 3300012834.a:Ga0160452_100642); c00102_3300012.. (original name was: 3300012834.a:Ga0160452_100448); c00103_3300012.. (original name was: 3300012834.a:Ga0160452_100609); c00105_3300012.. (original name was: 3300012834.a:Ga0160452_101062); c00106_3300012.. (original name was: 3300012834.a:Ga0160452_100653); c00107_3300012.. (original name was: 3300012834.a:Ga0160452_100454); c00108_3300012.. (original name was: 3300012834.a:Ga0160452_100949); c00109_3300012.. (original name was: 3300012834.a:Ga0160452_100551); c00110_3300012.. (original name was: 3300012834.a:Ga0160452_100153); c00111_3300012.. (original name was: 3300012834.a:Ga0160452_100641); c00112_3300012.. (original name was: 3300012834.a:Ga0160452_100662); c00113_3300012.. (original name was: 3300012834.a:Ga0160452_100253); c00114_3300012.. (original name was: 3300012834.a:Ga0160452_101071); c00115_3300012.. (original name was: 3300012834.a:Ga0160452_100576); c00116_3300012.. (original name was: 3300012834.a:Ga0160452_101770); c00117_3300012.. (original name was: 3300012834.a:Ga0160452_100712); c00118_3300012.. (original name was: 3300012834.a:Ga0160452_100829); c00120_3300012.. (original name was: 3300012834.a:Ga0160452_101118); c00121_3300012.. (original name was: 3300012834.a:Ga0160452_100156); c00122_3300012.. (original name was: 3300012834.a:Ga0160452_100974); c00123_3300012.. (original name was: 3300012834.a:Ga0160452_100565); c00124_3300012.. (original name was: 3300012834.a:Ga0160452_100554); c00125_3300012.. (original name was: 3300012834.a:Ga0160452_100963); c00126_3300012.. (original name was: 3300012834.a:Ga0160452_100470); c00127_3300012.. (original name was: 3300012834.a:Ga0160452_100585); c00128_3300012.. (original name was: 3300012834.a:Ga0160452_100259); c00129_3300012.. (original name was: 3300012834.a:Ga0160452_101077); c00130_3300012.. (original name was: 3300012834.a:Ga0160452_100889); c00131_3300012.. (original name was: 3300012834.a:Ga0160452_100480); c00132_3300012.. (original name was: 3300012834.a:Ga0160452_100281); c00133_3300012.. (original name was: 3300012834.a:Ga0160452_101389); c00134_3300012.. (original name was: 3300012834.a:Ga0160452_100980); c00135_3300012.. (original name was: 3300012834.a:Ga0160452_100201); c00136_3300012.. (original name was: 3300012834.a:Ga0160452_100610); c00138_3300012.. (original name was: 3300012834.a:Ga0160452_100615); c00139_3300012.. (original name was: 3300012834.a:Ga0160452_100212); c00140_3300012.. (original name was: 3300012834.a:Ga0160452_100621); c00141_3300012.. (original name was: 3300012834.a:Ga0160452_100427); c00142_3300012.. (original name was: 3300012834.a:Ga0160452_100816); c00143_3300012.. (original name was: 3300012834.a:Ga0160452_102861); c00144_3300012.. (original name was: 3300012834.a:Ga0160452_100407); c00145_3300012.. (original name was: 3300012834.a:Ga0160452_100830); c00146_3300012.. (original name was: 3300012834.a:Ga0160452_100750); c00147_3300012.. (original name was: 3300012834.a:Ga0160452_101977); c00148_3300012.. (original name was: 3300012834.a:Ga0160452_100584); c00149_3300012.. (original name was: 3300012834.a:Ga0160452_101999); c00150_3300012.. (original name was: 3300012834.a:Ga0160452_101181); c00151_3300012.. (original name was: 3300012834.a:Ga0160452_100385); c00152_3300012.. (original name was: 3300012834.a:Ga0160452_103092); c00154_3300012.. (original name was: 3300012834.a:Ga0160452_100423); c00155_3300012.. (original name was: 3300012834.a:Ga0160452_101338); c00156_3300012.. (original name was: 3300012834.a:Ga0160452_100520); c00157_3300012.. (original name was: 3300012834.a:Ga0160452_100321); c00158_3300012.. (original name was: 3300012834.a:Ga0160452_100395); c00159_3300012.. (original name was: 3300012834.a:Ga0160452_101213); c00160_3300012.. (original name was: 3300012834.a:Ga0160452_100146); c00161_3300012.. (original name was: 3300012834.a:Ga0160452_100285); c00162_3300012.. (original name was: 3300012834.a:Ga0160452_101921); c00163_3300012.. (original name was: 3300012834.a:Ga0160452_103115); c00166_3300012.. (original name was: 3300012834.a:Ga0160452_102553); c00167_3300012.. (original name was: 3300012834.a:Ga0160452_100558); c00170_3300012.. (original name was: 3300012834.a:Ga0160452_100773); c00171_3300012.. (original name was: 3300012834.a:Ga0160452_100191); c00172_3300012.. (original name was: 3300012834.a:Ga0160452_100246); c00173_3300012.. (original name was: 3300012834.a:Ga0160452_101064); c00174_3300012.. (original name was: 3300012834.a:Ga0160452_101263); c00175_3300012.. (original name was: 3300012834.a:Ga0160452_100666); c00176_3300012.. (original name was: 3300012834.a:Ga0160452_100267); c00177_3300012.. (original name was: 3300012834.a:Ga0160452_100676); c00178_3300012.. (original name was: 3300012834.a:Ga0160452_100687); c00179_3300012.. (original name was: 3300012834.a:Ga0160452_100278); c00181_3300012.. (original name was: 3300012834.a:Ga0160452_101248); c00182_3300012.. (original name was: 3300012834.a:Ga0160452_100224); c00183_3300012.. (original name was: 3300012834.a:Ga0160452_101042); c00184_3300012.. (original name was: 3300012834.a:Ga0160452_102269); c00185_3300012.. (original name was: 3300012834.a:Ga0160452_100169); c00186_3300012.. (original name was: 3300012834.a:Ga0160452_100567); c00187_3300012.. (original name was: 3300012834.a:Ga0160452_100485); c00188_3300012.. (original name was: 3300012834.a:Ga0160452_101281); c00189_3300012.. (original name was: 3300012834.a:Ga0160452_100934); c00190_3300012.. (original name was: 3300012834.a:Ga0160452_100431); c00192_3300012.. (original name was: 3300012834.a:Ga0160452_100301); c00194_3300012.. (original name was: 3300012834.a:Ga0160452_100526); c00195_3300012.. (original name was: 3300012834.a:Ga0160452_100408); c00196_3300012.. (original name was: 3300012834.a:Ga0160452_100561); c00197_3300012.. (original name was: 3300012834.a:Ga0160452_101357); c00198_3300012.. (original name was: 3300012834.a:Ga0160452_100210); c00199_3300012.. (original name was: 3300012834.a:Ga0160452_101413); c00200_3300012.. (original name was: 3300012834.a:Ga0160452_102231); c00201_3300012.. (original name was: 3300012834.a:Ga0160452_100838); c00202_3300012.. (original name was: 3300012834.a:Ga0160452_101033); c00203_3300012.. (original name was: 3300012834.a:Ga0160452_100696); c00204_3300012.. (original name was: 3300012834.a:Ga0160452_100497); c00205_3300012.. (original name was: 3300012834.a:Ga0160452_100435); c00206_3300012.. (original name was: 3300012834.a:Ga0160452_103185); c00207_3300012.. (original name was: 3300012834.a:Ga0160452_100444); c00208_3300012.. (original name was: 3300012834.a:Ga0160452_100842); c00209_3300012.. (original name was: 3300012834.a:Ga0160452_100916); c00210_3300012.. (original name was: 3300012834.a:Ga0160452_100507); c00211_3300012.. (original name was: 3300012834.a:Ga0160452_100706); c00213_3300012.. (original name was: 3300012834.a:Ga0160452_102971); c00214_3300012.. (original name was: 3300012834.a:Ga0160452_101578); c00215_3300012.. (original name was: 3300012834.a:Ga0160452_100185); c00216_3300012.. (original name was: 3300012834.a:Ga0160452_101416); c00217_3300012.. (original name was: 3300012834.a:Ga0160452_100620); c00218_3300012.. (original name was: 3300012834.a:Ga0160452_100593); c00219_3300012.. (original name was: 3300012834.a:Ga0160452_101002); c00220_3300012.. (original name was: 3300012834.a:Ga0160452_100328); c00221_3300012.. (original name was: 3300012834.a:Ga0160452_101425); c00222_3300012.. (original name was: 3300012834.a:Ga0160452_100992); c00223_3300012.. (original name was: 3300012834.a:Ga0160452_101116); c00224_3300012.. (original name was: 3300012834.a:Ga0160452_100718); c00225_3300012.. (original name was: 3300012834.a:Ga0160452_102479); c00226_3300012.. (original name was: 3300012834.a:Ga0160452_100640); c00227_3300012.. (original name was: 3300012834.a:Ga0160452_101043); c00228_3300012.. (original name was: 3300012834.a:Ga0160452_100371); c00229_3300012.. (original name was: 3300012834.a:Ga0160452_100708); c00230_3300012.. (original name was: 3300012834.a:Ga0160452_100635); c00231_3300012.. (original name was: 3300012834.a:Ga0160452_101862); c00232_3300012.. (original name was: 3300012834.a:Ga0160452_100514); c00233_3300012.. (original name was: 3300012834.a:Ga0160452_100415); c00234_3300012.. (original name was: 3300012834.a:Ga0160452_100601); c00235_3300012.. (original name was: 3300012834.a:Ga0160452_100264); c00236_3300012.. (original name was: 3300012834.a:Ga0160452_101331); c00238_3300012.. (original name was: 3300012834.a:Ga0160452_100745); c00239_3300012.. (original name was: 3300012834.a:Ga0160452_100336); c00240_3300012.. (original name was: 3300012834.a:Ga0160452_101317); c00241_3300012.. (original name was: 3300012834.a:Ga0160452_100908); c00242_3300012.. (original name was: 3300012834.a:Ga0160452_100499); c00243_3300012.. (original name was: 3300012834.a:Ga0160452_100220); c00244_3300012.. (original name was: 3300012834.a:Ga0160452_100455); c00245_3300012.. (original name was: 3300012834.a:Ga0160452_100460); c00246_3300012.. (original name was: 3300012834.a:Ga0160452_100250); c00247_3300012.. (original name was: 3300012834.a:Ga0160452_100659); c00248_3300012.. (original name was: 3300012834.a:Ga0160452_101199); c00249_3300012.. (original name was: 3300012834.a:Ga0160452_100381); c00250_3300012.. (original name was: 3300012834.a:Ga0160452_100939); c00251_3300012.. (original name was: 3300012834.a:Ga0160452_100530); c00252_3300012.. (original name was: 3300012834.a:Ga0160452_100331); c00253_3300012.. (original name was: 3300012834.a:Ga0160452_100269); c00254_3300012.. (original name was: 3300012834.a:Ga0160452_100678); c00255_3300012.. (original name was: 3300012834.a:Ga0160452_100692); c00256_3300012.. (original name was: 3300012834.a:Ga0160452_100283); c00258_3300012.. (original name was: 3300012834.a:Ga0160452_100263); c00259_3300012.. (original name was: 3300012834.a:Ga0160452_100550); c00260_3300012.. (original name was: 3300012834.a:Ga0160452_100141); c00261_3300012.. (original name was: 3300012834.a:Ga0160452_102969); c00262_3300012.. (original name was: 3300012834.a:Ga0160452_100924); c00263_3300012.. (original name was: 3300012834.a:Ga0160452_100515); c00264_3300012.. (original name was: 3300012834.a:Ga0160452_100106); c00265_3300012.. (original name was: 3300012834.a:Ga0160452_100891); c00266_3300012.. (original name was: 3300012834.a:Ga0160452_101300); c00267_3300012.. (original name was: 3300012834.a:Ga0160452_100484); c00268_3300012.. (original name was: 3300012834.a:Ga0160452_101302); c00269_3300012.. (original name was: 3300012834.a:Ga0160452_100628)

Compact view

c00002_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 3,546 nt. (total: 3,546 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 3546:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ser)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg2_2

Search NORINE for peptide: strict or relaxed

AMP-binding (395..800): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHFSLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

c00009_3300012.. - Region 1 - NRPS,transAT-PKS

Download region GenBank file

Location: 1 - 28,568 nt. (total: 28,568 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
transAT-PKS: (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)))

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core biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 28568:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn - X) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg9_2

PKS_AT (4..287): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 75.0%; inactive: 66.7%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 89.5
inactive: 38.5
Methoxymalonyl-CoA: 33.4
Methylmalonyl-CoA: 26.8
Propionyl-CoA: 23.7
2-Methylbutyryl-CoA: 18.1
CHC-CoA: 12.1
Ethylmalonyl-CoA: 10.9
trans-1,2-CPDA: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg9_3

Search NORINE for peptide: strict or relaxed

AMP-binding (468..861): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (1501..1894): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALiiGciMK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 60% (weak)

c00039_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 4,751 nt. (total: 4,751 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

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Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 4751:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg39_1

Search NORINE for peptide: strict or relaxed

AMP-binding (480..880): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFfvGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 80% (moderate)

c00062_3300012.. - Region 1 - terpene

Download region GenBank file

Location: 25,199 - 44,680 nt. (total: 19,482 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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c00065_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 27,832 nt. (total: 27,832 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

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Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 27832:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-asn) + (gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg65_2

Search NORINE for peptide: strict or relaxed

AMP-binding (265..669): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

ctg65_3

Search NORINE for peptide: strict or relaxed

AMP-binding (489..882): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQmGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

c00076_3300012.. - Region 1 - T3PKS

Download region GenBank file

Location: 33,214 - 69,016 nt. (total: 35,803 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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c00100_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 9,689 nt. (total: 9,689 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 9689:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-thr) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg100_1

Search NORINE for peptide: strict or relaxed

AMP-binding (1039..1451): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DmWNIaMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 80% (moderate)

ctg100_2

Search NORINE for peptide: strict or relaxed

AMP-binding (473..887): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DVWNiAMVHK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 90% (moderate)

c00104_3300012.. - Region 1 - NRPS-like

Download region GenBank file

Location: 13,573 - 36,678 nt. (total: 23,106 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

Selected features only

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c00119_3300012.. - Region 1 - terpene

Download region GenBank file

Location: 2,435 - 23,184 nt. (total: 20,750 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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c00137_3300012.. - Region 1 - NRPS-like

Download region GenBank file

Location: 1 - 23,968 nt. (total: 23,968 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 23968:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg137_1

Search NORINE for peptide: strict or relaxed

AMP-binding (131..531): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DItQLGLVWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

c00153_3300012.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 1 - 57,287 nt. (total: 57,287 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 57287:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal - gly) + (ccmal) + (mal - D-ile) + (leu) + (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg153_19

Search NORINE for peptide: strict or relaxed

CAL_domain (33..468): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 138.1
NH2: 26.2
shikimic_acid: 0.0
Acetyl-CoA: 0.0
AHBA: 0.0

PKS_AT (1204..1498): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 75.0%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 109.7
inactive: 57.6
Methylmalonyl-CoA: 42.6
Methoxymalonyl-CoA: 40.5
Propionyl-CoA: 26.5
Benzoyl-CoA: 23.4
Isobutyryl-CoA: 23.3
CHC-CoA: 16.9
Ethylmalonyl-CoA: 16.3
fatty_acid: 12.2
Acetyl-CoA: 11.4
3-Methylbutyryl-CoA: 11.2
2-Methylbutyryl-CoA: 8.3
trans-1,2-CPDA: 0.0

AMP-binding (2190..2575): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQiGVIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

ctg153_20

PKS_AT (6..295): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 70.8%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 87.1
Methoxymalonyl-CoA: 38.0
Methylmalonyl-CoA: 36.9
inactive: 32.4
Isobutyryl-CoA: 18.9
Propionyl-CoA: 14.1
trans-1,2-CPDA: 12.6
CHC-CoA: 12.4
Benzoyl-CoA: 11.8
2-Methylbutyryl-CoA: 11.7
fatty_acid: 0.0
Ethylmalonyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg153_23

Search NORINE for peptide: strict or relaxed

AMP-binding (1249..1648): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAFlLGlVvK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

ctg153_24

Search NORINE for peptide: strict or relaxed

AMP-binding (468..869): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DAFlLGCTiK
Nearest Stachelhaus code:: val, ile
Stachelhaus code match:: 80% (moderate)

ctg153_25

PKS_AT (543..827): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 79.2%; 2-Rhyd-Malonyl-CoA: 58.3%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 149.4
inactive: 76.4
Methoxymalonyl-CoA: 73.2
Methylmalonyl-CoA: 53.1
CHC-CoA: 34.0
Propionyl-CoA: 27.7
Ethylmalonyl-CoA: 26.7
Acetyl-CoA: 26.7
Benzoyl-CoA: 24.3
Isobutyryl-CoA: 17.8
2-Methylbutyryl-CoA: 17.5
fatty_acid: 16.6
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

c00164_3300012.. - Region 1 - NRPS,transAT-PKS-like

Download region GenBank file

Location: 3 - 24,786 nt. (total: 24,784 nt) Show pHMM detection rules used

transAT-PKS-like: cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS) and not PKS_AT)
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00164_3300012.. - Region 2 - NRPS,transAT-PKS

Download region GenBank file

Location: 44,474 - 80,626 nt. (total: 36,153 nt) Show pHMM detection rules used

Region on contig edge.

transAT-PKS: (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 44473 - 80626:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal - gly) + (ccmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg164_51

PKS_AT (7..288): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 62.5%; 2-Methylbutyryl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 112.9
Methoxymalonyl-CoA: 43.8
Methylmalonyl-CoA: 39.2
inactive: 32.8
Propionyl-CoA: 21.7
2-Methylbutyryl-CoA: 15.3
fatty_acid: 14.8
Ethylmalonyl-CoA: 14.4
CHC-CoA: 13.9
Isobutyryl-CoA: 9.7
trans-1,2-CPDA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg164_52

Search NORINE for peptide: strict or relaxed

AMP-binding (2264..2656): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQcGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

c00165_3300012.. - Region 1 - ectoine

Download region GenBank file

Location: 12,904 - 21,495 nt. (total: 8,592 nt) Show pHMM detection rules used

Region on contig edge.

ectoine: ectoine_synt

Legend:

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c00168_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 67,917 - 140,253 nt. (total: 72,337 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 67916 - 140253:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-asn) + (X) + (mal) + (D-X) + (leu - asn - gln - gln)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg168_74

Search NORINE for peptide: strict or relaxed

AMP-binding (479..929): leu

NRPSPredictor2: leu

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: leu

Stachelhaus prediction details:

Stachelhaus sequence:: DvWFtGNiVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

AMP-binding (1653..2092): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (2830..3246): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: gln

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDLGtVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

AMP-binding (3930..4352): gln

NRPSPredictor2: gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDLGaVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

ctg168_75

Search NORINE for peptide: strict or relaxed

AMP-binding (288..697): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWQstadDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 50% (weak)

ctg168_78

Search NORINE for peptide: strict or relaxed

AMP-binding (489..888): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DpenIGnVDK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 60% (weak)

ctg168_83

Search NORINE for peptide: strict or relaxed

AMP-binding (460..877): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

c00169_3300012.. - Region 1 - ladderane

Download region GenBank file

Location: 1 - 33,704 nt. (total: 33,704 nt) Show pHMM detection rules used

Region on contig edge.

ladderane: ladderane

Legend:

core biosynthetic genes

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c00180_3300012.. - Region 1 - resorcinol

Download region GenBank file

Location: 1 - 28,398 nt. (total: 28,398 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

Legend:

core biosynthetic genes

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c00191_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 7,971 nt. (total: 7,971 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 7971:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg191_1

Search NORINE for peptide: strict or relaxed

AMP-binding (273..684): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiWeMtadDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 50% (weak)

ctg191_2

Search NORINE for peptide: strict or relaxed

AMP-binding (44..455): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: tdWQFGiIyK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 60% (weak)

c00193_3300012.. - Region 1 - bacteriocin

Download region GenBank file

Location: 12,165 - 22,407 nt. (total: 10,243 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

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Gene details

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c00212_3300012.. - Region 1 - terpene

Download region GenBank file

Location: 15,441 - 37,339 nt. (total: 21,899 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

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resistance

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Gene details

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c00237_3300012.. - Region 1 - transAT-PKS-like

Download region GenBank file

Location: 1 - 6,294 nt. (total: 6,294 nt) Show pHMM detection rules used

Region on contig edge.

transAT-PKS-like: cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS) and not PKS_AT)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 6294:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

c00257_3300012.. - Region 1 - NRPS

Download region GenBank file

Location: 2,249 - 33,664 nt. (total: 31,416 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 2248 - 33664:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-asn) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg257_24

Search NORINE for peptide: strict or relaxed

AMP-binding (223..619): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

ctg257_29

Search NORINE for peptide: strict or relaxed

AMP-binding (468..868): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAvLItlIsK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)