3300013123_48 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00139_3300013.. (original name was: 3300013123.a:Ga0172368_10000492)

Region	Type	From	To	Most similar known cluster		Similarity
Region 139.1	NRPS,T1PKS	1	56,013

c00171_3300013.. (original name was: 3300013123.a:Ga0172368_10019476)

Region	Type	From	To	Most similar known cluster		Similarity
Region 171.1	lassopeptide	1	5,709

c00173_3300013.. (original name was: 3300013123.a:Ga0172368_10000814)

Region	Type	From	To	Most similar known cluster		Similarity
Region 173.1	NRPS	16,730	44,103

Region	Type	From	To	Similarity
Region 139.1	NRPS,T1PKS	1	56,013
Region 171.1	lassopeptide	1	5,709
Region 173.1	NRPS	16,730	44,103

No secondary metabolite regions were found in these records:: c00001_3300013.. (original name was: 3300013123.a:Ga0172368_10026633); c00002_3300013.. (original name was: 3300013123.a:Ga0172368_10008136); c00003_3300013.. (original name was: 3300013123.a:Ga0172368_10023633); c00004_3300013.. (original name was: 3300013123.a:Ga0172368_10038729); c00005_3300013.. (original name was: 3300013123.a:Ga0172368_10034584); c00006_3300013.. (original name was: 3300013123.a:Ga0172368_10008063); c00007_3300013.. (original name was: 3300013123.a:Ga0172368_10006745); c00008_3300013.. (original name was: 3300013123.a:Ga0172368_10004642); c00009_3300013.. (original name was: 3300013123.a:Ga0172368_10002386); c00010_3300013.. (original name was: 3300013123.a:Ga0172368_10008378); c00011_3300013.. (original name was: 3300013123.a:Ga0172368_10016209); c00012_3300013.. (original name was: 3300013123.a:Ga0172368_10011624); c00013_3300013.. (original name was: 3300013123.a:Ga0172368_10011388); c00014_3300013.. (original name was: 3300013123.a:Ga0172368_10045011); c00015_3300013.. (original name was: 3300013123.a:Ga0172368_10044878); c00016_3300013.. (original name was: 3300013123.a:Ga0172368_10041405); c00017_3300013.. (original name was: 3300013123.a:Ga0172368_10041114); c00018_3300013.. (original name was: 3300013123.a:Ga0172368_10040367); c00019_3300013.. (original name was: 3300013123.a:Ga0172368_10038852); c00020_3300013.. (original name was: 3300013123.a:Ga0172368_10037444); c00021_3300013.. (original name was: 3300013123.a:Ga0172368_10037391); c00022_3300013.. (original name was: 3300013123.a:Ga0172368_10036486); c00023_3300013.. (original name was: 3300013123.a:Ga0172368_10034656); c00024_3300013.. (original name was: 3300013123.a:Ga0172368_10033199); c00025_3300013.. (original name was: 3300013123.a:Ga0172368_10032567); c00026_3300013.. (original name was: 3300013123.a:Ga0172368_10031941); c00027_3300013.. (original name was: 3300013123.a:Ga0172368_10031839); c00028_3300013.. (original name was: 3300013123.a:Ga0172368_10040706); c00029_3300013.. (original name was: 3300013123.a:Ga0172368_10030343); c00030_3300013.. (original name was: 3300013123.a:Ga0172368_10011216); c00031_3300013.. (original name was: 3300013123.a:Ga0172368_10014979); c00032_3300013.. (original name was: 3300013123.a:Ga0172368_10020138); c00033_3300013.. (original name was: 3300013123.a:Ga0172368_10043732); c00034_3300013.. (original name was: 3300013123.a:Ga0172368_10022055); c00035_3300013.. (original name was: 3300013123.a:Ga0172368_10021797); c00036_3300013.. (original name was: 3300013123.a:Ga0172368_10014615); c00037_3300013.. (original name was: 3300013123.a:Ga0172368_10036162); c00038_3300013.. (original name was: 3300013123.a:Ga0172368_10018224); c00039_3300013.. (original name was: 3300013123.a:Ga0172368_10033793); c00040_3300013.. (original name was: 3300013123.a:Ga0172368_10038935); c00041_3300013.. (original name was: 3300013123.a:Ga0172368_10005899); c00042_3300013.. (original name was: 3300013123.a:Ga0172368_10039270); c00043_3300013.. (original name was: 3300013123.a:Ga0172368_10006035); c00044_3300013.. (original name was: 3300013123.a:Ga0172368_10003316); c00045_3300013.. (original name was: 3300013123.a:Ga0172368_10013817); c00046_3300013.. (original name was: 3300013123.a:Ga0172368_10017248); c00047_3300013.. (original name was: 3300013123.a:Ga0172368_10017628); c00048_3300013.. (original name was: 3300013123.a:Ga0172368_10015453); c00049_3300013.. (original name was: 3300013123.a:Ga0172368_10014277); c00050_3300013.. (original name was: 3300013123.a:Ga0172368_10005730); c00051_3300013.. (original name was: 3300013123.a:Ga0172368_10016756); c00052_3300013.. (original name was: 3300013123.a:Ga0172368_10017118); c00053_3300013.. (original name was: 3300013123.a:Ga0172368_10014454); c00054_3300013.. (original name was: 3300013123.a:Ga0172368_10030939); c00055_3300013.. (original name was: 3300013123.a:Ga0172368_10003475); c00056_3300013.. (original name was: 3300013123.a:Ga0172368_10027755); c00057_3300013.. (original name was: 3300013123.a:Ga0172368_10038922); c00058_3300013.. (original name was: 3300013123.a:Ga0172368_10019223); c00059_3300013.. (original name was: 3300013123.a:Ga0172368_10028288); c00060_3300013.. (original name was: 3300013123.a:Ga0172368_10003809); c00061_3300013.. (original name was: 3300013123.a:Ga0172368_10013117); c00062_3300013.. (original name was: 3300013123.a:Ga0172368_10013151); c00063_3300013.. (original name was: 3300013123.a:Ga0172368_10017910); c00064_3300013.. (original name was: 3300013123.a:Ga0172368_10006400); c00065_3300013.. (original name was: 3300013123.a:Ga0172368_10002714); c00066_3300013.. (original name was: 3300013123.a:Ga0172368_10041474); c00067_3300013.. (original name was: 3300013123.a:Ga0172368_10017334); c00068_3300013.. (original name was: 3300013123.a:Ga0172368_10009381); c00069_3300013.. (original name was: 3300013123.a:Ga0172368_10006109); c00070_3300013.. (original name was: 3300013123.a:Ga0172368_10031764); c00071_3300013.. (original name was: 3300013123.a:Ga0172368_10009388); c00072_3300013.. (original name was: 3300013123.a:Ga0172368_10003471); c00073_3300013.. (original name was: 3300013123.a:Ga0172368_10008900); c00074_3300013.. (original name was: 3300013123.a:Ga0172368_10027602); c00075_3300013.. (original name was: 3300013123.a:Ga0172368_10017226); c00076_3300013.. (original name was: 3300013123.a:Ga0172368_10008496); c00077_3300013.. (original name was: 3300013123.a:Ga0172368_10021240); c00078_3300013.. (original name was: 3300013123.a:Ga0172368_10004107); c00079_3300013.. (original name was: 3300013123.a:Ga0172368_10012885); c00080_3300013.. (original name was: 3300013123.a:Ga0172368_10025896); c00081_3300013.. (original name was: 3300013123.a:Ga0172368_10007188); c00082_3300013.. (original name was: 3300013123.a:Ga0172368_10023309); c00083_3300013.. (original name was: 3300013123.a:Ga0172368_10014629); c00084_3300013.. (original name was: 3300013123.a:Ga0172368_10030547); c00085_3300013.. (original name was: 3300013123.a:Ga0172368_10014491); c00086_3300013.. (original name was: 3300013123.a:Ga0172368_10020992); c00087_3300013.. (original name was: 3300013123.a:Ga0172368_10039082); c00088_3300013.. (original name was: 3300013123.a:Ga0172368_10028857); c00089_3300013.. (original name was: 3300013123.a:Ga0172368_10024678); c00090_3300013.. (original name was: 3300013123.a:Ga0172368_10018536); c00091_3300013.. (original name was: 3300013123.a:Ga0172368_10045175); c00092_3300013.. (original name was: 3300013123.a:Ga0172368_10009751); c00093_3300013.. (original name was: 3300013123.a:Ga0172368_10018699); c00094_3300013.. (original name was: 3300013123.a:Ga0172368_10033322); c00095_3300013.. (original name was: 3300013123.a:Ga0172368_10014291); c00096_3300013.. (original name was: 3300013123.a:Ga0172368_10001878); c00097_3300013.. (original name was: 3300013123.a:Ga0172368_10011681); c00098_3300013.. (original name was: 3300013123.a:Ga0172368_10007291); c00099_3300013.. (original name was: 3300013123.a:Ga0172368_10011650); c00100_3300013.. (original name was: 3300013123.a:Ga0172368_10033739); c00101_3300013.. (original name was: 3300013123.a:Ga0172368_10012317); c00102_3300013.. (original name was: 3300013123.a:Ga0172368_10019198); c00103_3300013.. (original name was: 3300013123.a:Ga0172368_10039064); c00104_3300013.. (original name was: 3300013123.a:Ga0172368_10007274); c00105_3300013.. (original name was: 3300013123.a:Ga0172368_10008339); c00106_3300013.. (original name was: 3300013123.a:Ga0172368_10011744); c00107_3300013.. (original name was: 3300013123.a:Ga0172368_10040801); c00108_3300013.. (original name was: 3300013123.a:Ga0172368_10009420); c00109_3300013.. (original name was: 3300013123.a:Ga0172368_10006167); c00110_3300013.. (original name was: 3300013123.a:Ga0172368_10030581); c00111_3300013.. (original name was: 3300013123.a:Ga0172368_10010208); c00112_3300013.. (original name was: 3300013123.a:Ga0172368_10031792); c00113_3300013.. (original name was: 3300013123.a:Ga0172368_10012994); c00114_3300013.. (original name was: 3300013123.a:Ga0172368_10007923); c00115_3300013.. (original name was: 3300013123.a:Ga0172368_10001146); c00116_3300013.. (original name was: 3300013123.a:Ga0172368_10008907); c00117_3300013.. (original name was: 3300013123.a:Ga0172368_10037725); c00118_3300013.. (original name was: 3300013123.a:Ga0172368_10033226); c00119_3300013.. (original name was: 3300013123.a:Ga0172368_10038997); c00120_3300013.. (original name was: 3300013123.a:Ga0172368_10010664); c00121_3300013.. (original name was: 3300013123.a:Ga0172368_10038878); c00122_3300013.. (original name was: 3300013123.a:Ga0172368_10013156); c00123_3300013.. (original name was: 3300013123.a:Ga0172368_10008896); c00124_3300013.. (original name was: 3300013123.a:Ga0172368_10023979); c00125_3300013.. (original name was: 3300013123.a:Ga0172368_10020433); c00126_3300013.. (original name was: 3300013123.a:Ga0172368_10018237); c00127_3300013.. (original name was: 3300013123.a:Ga0172368_10006800); c00128_3300013.. (original name was: 3300013123.a:Ga0172368_10011940); c00129_3300013.. (original name was: 3300013123.a:Ga0172368_10030915); c00130_3300013.. (original name was: 3300013123.a:Ga0172368_10001394); c00131_3300013.. (original name was: 3300013123.a:Ga0172368_10025859); c00132_3300013.. (original name was: 3300013123.a:Ga0172368_10004294); c00133_3300013.. (original name was: 3300013123.a:Ga0172368_10000986); c00134_3300013.. (original name was: 3300013123.a:Ga0172368_10038093); c00135_3300013.. (original name was: 3300013123.a:Ga0172368_10032322); c00136_3300013.. (original name was: 3300013123.a:Ga0172368_10019308); c00137_3300013.. (original name was: 3300013123.a:Ga0172368_10028358); c00138_3300013.. (original name was: 3300013123.a:Ga0172368_10016662); c00140_3300013.. (original name was: 3300013123.a:Ga0172368_10037691); c00141_3300013.. (original name was: 3300013123.a:Ga0172368_10034010); c00142_3300013.. (original name was: 3300013123.a:Ga0172368_10020653); c00143_3300013.. (original name was: 3300013123.a:Ga0172368_10004158); c00144_3300013.. (original name was: 3300013123.a:Ga0172368_10013489); c00145_3300013.. (original name was: 3300013123.a:Ga0172368_10020864); c00146_3300013.. (original name was: 3300013123.a:Ga0172368_10002355); c00147_3300013.. (original name was: 3300013123.a:Ga0172368_10020152); c00148_3300013.. (original name was: 3300013123.a:Ga0172368_10036154); c00149_3300013.. (original name was: 3300013123.a:Ga0172368_10020460); c00150_3300013.. (original name was: 3300013123.a:Ga0172368_10021851); c00151_3300013.. (original name was: 3300013123.a:Ga0172368_10015833); c00152_3300013.. (original name was: 3300013123.a:Ga0172368_10007493); c00153_3300013.. (original name was: 3300013123.a:Ga0172368_10007084); c00154_3300013.. (original name was: 3300013123.a:Ga0172368_10043765); c00155_3300013.. (original name was: 3300013123.a:Ga0172368_10015534); c00156_3300013.. (original name was: 3300013123.a:Ga0172368_10005617); c00157_3300013.. (original name was: 3300013123.a:Ga0172368_10017113); c00158_3300013.. (original name was: 3300013123.a:Ga0172368_10001527); c00159_3300013.. (original name was: 3300013123.a:Ga0172368_10031272); c00160_3300013.. (original name was: 3300013123.a:Ga0172368_10004118); c00161_3300013.. (original name was: 3300013123.a:Ga0172368_10035090); c00162_3300013.. (original name was: 3300013123.a:Ga0172368_10015927); c00163_3300013.. (original name was: 3300013123.a:Ga0172368_10013440); c00164_3300013.. (original name was: 3300013123.a:Ga0172368_10023839); c00165_3300013.. (original name was: 3300013123.a:Ga0172368_10025044); c00166_3300013.. (original name was: 3300013123.a:Ga0172368_10012816); c00167_3300013.. (original name was: 3300013123.a:Ga0172368_10005211); c00168_3300013.. (original name was: 3300013123.a:Ga0172368_10024731); c00169_3300013.. (original name was: 3300013123.a:Ga0172368_10001715); c00170_3300013.. (original name was: 3300013123.a:Ga0172368_10007867); c00172_3300013.. (original name was: 3300013123.a:Ga0172368_10004595); c00174_3300013.. (original name was: 3300013123.a:Ga0172368_10023502); c00175_3300013.. (original name was: 3300013123.a:Ga0172368_10030204); c00176_3300013.. (original name was: 3300013123.a:Ga0172368_10017239); c00177_3300013.. (original name was: 3300013123.a:Ga0172368_10041390); c00178_3300013.. (original name was: 3300013123.a:Ga0172368_10030347); c00179_3300013.. (original name was: 3300013123.a:Ga0172368_10004692); c00180_3300013.. (original name was: 3300013123.a:Ga0172368_10003056); c00181_3300013.. (original name was: 3300013123.a:Ga0172368_10014590); c00182_3300013.. (original name was: 3300013123.a:Ga0172368_10005167); c00183_3300013.. (original name was: 3300013123.a:Ga0172368_10007562); c00184_3300013.. (original name was: 3300013123.a:Ga0172368_10012158); c00185_3300013.. (original name was: 3300013123.a:Ga0172368_10017083); c00186_3300013.. (original name was: 3300013123.a:Ga0172368_10013428); c00187_3300013.. (original name was: 3300013123.a:Ga0172368_10007031); c00188_3300013.. (original name was: 3300013123.a:Ga0172368_10027369); c00189_3300013.. (original name was: 3300013123.a:Ga0172368_10001798); c00190_3300013.. (original name was: 3300013123.a:Ga0172368_10032335); c00191_3300013.. (original name was: 3300013123.a:Ga0172368_10017656); c00192_3300013.. (original name was: 3300013123.a:Ga0172368_10027018); c00193_3300013.. (original name was: 3300013123.a:Ga0172368_10009134); c00194_3300013.. (original name was: 3300013123.a:Ga0172368_10007542); c00195_3300013.. (original name was: 3300013123.a:Ga0172368_10019112); c00196_3300013.. (original name was: 3300013123.a:Ga0172368_10026724); c00197_3300013.. (original name was: 3300013123.a:Ga0172368_10009806); c00198_3300013.. (original name was: 3300013123.a:Ga0172368_10018508); c00199_3300013.. (original name was: 3300013123.a:Ga0172368_10002591); c00200_3300013.. (original name was: 3300013123.a:Ga0172368_10002979); c00201_3300013.. (original name was: 3300013123.a:Ga0172368_10004928); c00202_3300013.. (original name was: 3300013123.a:Ga0172368_10034911); c00203_3300013.. (original name was: 3300013123.a:Ga0172368_10006802); c00204_3300013.. (original name was: 3300013123.a:Ga0172368_10013948); c00205_3300013.. (original name was: 3300013123.a:Ga0172368_10033353); c00206_3300013.. (original name was: 3300013123.a:Ga0172368_10012945); c00207_3300013.. (original name was: 3300013123.a:Ga0172368_10014139); c00208_3300013.. (original name was: 3300013123.a:Ga0172368_10023758); c00209_3300013.. (original name was: 3300013123.a:Ga0172368_10006692); c00210_3300013.. (original name was: 3300013123.a:Ga0172368_10002028); c00211_3300013.. (original name was: 3300013123.a:Ga0172368_10010242); c00212_3300013.. (original name was: 3300013123.a:Ga0172368_10005343); c00213_3300013.. (original name was: 3300013123.a:Ga0172368_10002429); c00214_3300013.. (original name was: 3300013123.a:Ga0172368_10027106); c00215_3300013.. (original name was: 3300013123.a:Ga0172368_10010600); c00216_3300013.. (original name was: 3300013123.a:Ga0172368_10014752); c00217_3300013.. (original name was: 3300013123.a:Ga0172368_10013621); c00218_3300013.. (original name was: 3300013123.a:Ga0172368_10007704); c00219_3300013.. (original name was: 3300013123.a:Ga0172368_10012526); c00220_3300013.. (original name was: 3300013123.a:Ga0172368_10014487); c00221_3300013.. (original name was: 3300013123.a:Ga0172368_10024976); c00222_3300013.. (original name was: 3300013123.a:Ga0172368_10015408); c00223_3300013.. (original name was: 3300013123.a:Ga0172368_10011169); c00224_3300013.. (original name was: 3300013123.a:Ga0172368_10003338); c00225_3300013.. (original name was: 3300013123.a:Ga0172368_10029318); c00226_3300013.. (original name was: 3300013123.a:Ga0172368_10017291); c00227_3300013.. (original name was: 3300013123.a:Ga0172368_10002258); c00228_3300013.. (original name was: 3300013123.a:Ga0172368_10024641); c00229_3300013.. (original name was: 3300013123.a:Ga0172368_10010077); c00230_3300013.. (original name was: 3300013123.a:Ga0172368_10004605); c00231_3300013.. (original name was: 3300013123.a:Ga0172368_10019849); c00232_3300013.. (original name was: 3300013123.a:Ga0172368_10026954); c00233_3300013.. (original name was: 3300013123.a:Ga0172368_10011254); c00234_3300013.. (original name was: 3300013123.a:Ga0172368_10011474); c00235_3300013.. (original name was: 3300013123.a:Ga0172368_10008023); c00236_3300013.. (original name was: 3300013123.a:Ga0172368_10025089); c00237_3300013.. (original name was: 3300013123.a:Ga0172368_10031241); c00238_3300013.. (original name was: 3300013123.a:Ga0172368_10024351); c00239_3300013.. (original name was: 3300013123.a:Ga0172368_10031713)

Compact view

c00139_3300013.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 1 - 56,013 nt. (total: 56,013 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 56013:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal) + (redmal) + (X) + (X) + (X - D-thr)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 0 - 53986:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal) + (redmal) + (X) + (X) + (X - D-thr)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 19970 - 56013:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ccmal) + (redmal) + (X) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg139_4

Search NORINE for peptide: strict or relaxed

AMP-binding (12..446): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: eAkqLsLLlK
Nearest Stachelhaus code:: hpg
Stachelhaus code match:: 50% (weak)

AMP-binding (1663..2051): thr

NRPSPredictor2: thr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: thr
Single AA prediction:: thr

Stachelhaus prediction details:

Stachelhaus sequence:: DFWNIGMVHK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 100% (strong)

ctg139_7

Search NORINE for peptide: strict or relaxed

AMP-binding (1611..2011): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMaNcGeIgK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

ctg139_17

Search NORINE for peptide: strict or relaxed

AMP-binding (482..890): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVenIGaItK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 60% (weak)

ctg139_22

PKS_AT (477..770): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 148.3
inactive: 99.6
Methoxymalonyl-CoA: 60.8
Methylmalonyl-CoA: 46.8
Propionyl-CoA: 41.1
Isobutyryl-CoA: 35.5
Acetyl-CoA: 30.1
trans-1,2-CPDA: 22.3
CHC-CoA: 20.6
Ethylmalonyl-CoA: 20.1
Benzoyl-CoA: 19.2
fatty_acid: 18.3
3-Methylbutyryl-CoA: 16.5
2-Methylbutyryl-CoA: 15.4

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 83.3%; inactive: 79.2%

ctg139_23

PKS_AT (0..284): pk

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 55.5
Malonyl-CoA: 50.5
Methoxymalonyl-CoA: 47.9
Propionyl-CoA: 37.9
Ethylmalonyl-CoA: 35.4
2-Methylbutyryl-CoA: 27.6
trans-1,2-CPDA: 26.9
Benzoyl-CoA: 21.9
inactive: 18.3
CHC-CoA: 16.1
Isobutyryl-CoA: 14.1
fatty_acid: 6.4
Acetyl-CoA: 3.5
3-Methylbutyryl-CoA: 0.2

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 54.2%

PKS_AT (962..1256): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 148.7
inactive: 79.5
Methoxymalonyl-CoA: 62.4
Methylmalonyl-CoA: 55.8
Propionyl-CoA: 39.1
Isobutyryl-CoA: 29.3
3-Methylbutyryl-CoA: 19.6
Ethylmalonyl-CoA: 17.5
Acetyl-CoA: 17.4
Benzoyl-CoA: 12.6
fatty_acid: 12.5
2-Methylbutyryl-CoA: 12.0
trans-1,2-CPDA: 9.3
CHC-CoA: 8.1

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 79.2%; inactive: 62.5%

c00171_3300013.. - Region 1 - lassopeptide

Download region GenBank file

Location: 1 - 5,709 nt. (total: 5,709 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lasso peptides

Lasso peptide predictions

Lassopeptide(s) for ctg171_3 - Putative Class II

ctg171_3 leader / core peptide / cleaved tail: MMVIFVVNANMESL - GLAAAIFGGSKMGSISSAQGYGDF

Legend:

Red: Putative macrolactam
Purple: Putative cleaved off residues

Lasso peptides

Core peptide predictions

ctg171_3 - Class II: Cleavage pHMM score: -15.50; RODEO score: 16; Monoisotopic mass: 2273.1 Da; Molecular weight: 2274.5 Da; Number of bridges: 0

c00173_3300013.. - Region 1 - NRPS

Download region GenBank file

Location: 16,730 - 44,103 nt. (total: 27,374 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 16729 - 44103:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (gly - tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg173_35

Search NORINE for peptide: strict or relaxed

AMP-binding (227..621): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

AMP-binding (1278..1672): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DgSTIAAVCK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 90% (moderate)