3300014970_5 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00007_3300014.. (original name was: 3300014970.a:Ga0169826_100630)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	NRPS	1	10,848

c00028_3300014.. (original name was: 3300014970.a:Ga0169826_100122)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	sactipeptide	54,301	74,441

c00030_3300014.. (original name was: 3300014970.a:Ga0169826_100126)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	NRPS	47,099	73,979

c00041_3300014.. (original name was: 3300014970.a:Ga0169826_100019)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	lanthipeptide	75,267	97,927

c00062_3300014.. (original name was: 3300014970.a:Ga0169826_100180)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	NRPS	30,380	54,429

Region	Type	From	To	Similarity
Region 7.1	NRPS	1	10,848
Region 28.1	sactipeptide	54,301	74,441
Region 30.1	NRPS	47,099	73,979
Region 41.1	lanthipeptide	75,267	97,927
Region 62.1	NRPS	30,380	54,429

No secondary metabolite regions were found in these records:: c00001_3300014.. (original name was: 3300014970.a:Ga0169826_101606); c00002_3300014.. (original name was: 3300014970.a:Ga0169826_101531); c00003_3300014.. (original name was: 3300014970.a:Ga0169826_101376); c00004_3300014.. (original name was: 3300014970.a:Ga0169826_101123); c00005_3300014.. (original name was: 3300014970.a:Ga0169826_100907); c00006_3300014.. (original name was: 3300014970.a:Ga0169826_100857); c00008_3300014.. (original name was: 3300014970.a:Ga0169826_100584); c00009_3300014.. (original name was: 3300014970.a:Ga0169826_100467); c00010_3300014.. (original name was: 3300014970.a:Ga0169826_100421); c00011_3300014.. (original name was: 3300014970.a:Ga0169826_100418); c00012_3300014.. (original name was: 3300014970.a:Ga0169826_100416); c00013_3300014.. (original name was: 3300014970.a:Ga0169826_100391); c00014_3300014.. (original name was: 3300014970.a:Ga0169826_100382); c00015_3300014.. (original name was: 3300014970.a:Ga0169826_100326); c00016_3300014.. (original name was: 3300014970.a:Ga0169826_100323); c00017_3300014.. (original name was: 3300014970.a:Ga0169826_101285); c00018_3300014.. (original name was: 3300014970.a:Ga0169826_100315); c00019_3300014.. (original name was: 3300014970.a:Ga0169826_100312); c00020_3300014.. (original name was: 3300014970.a:Ga0169826_100356); c00021_3300014.. (original name was: 3300014970.a:Ga0169826_100162); c00022_3300014.. (original name was: 3300014970.a:Ga0169826_100146); c00023_3300014.. (original name was: 3300014970.a:Ga0169826_100052); c00024_3300014.. (original name was: 3300014970.a:Ga0169826_100185); c00025_3300014.. (original name was: 3300014970.a:Ga0169826_100232); c00026_3300014.. (original name was: 3300014970.a:Ga0169826_100512); c00027_3300014.. (original name was: 3300014970.a:Ga0169826_100124); c00029_3300014.. (original name was: 3300014970.a:Ga0169826_100263); c00031_3300014.. (original name was: 3300014970.a:Ga0169826_100317); c00032_3300014.. (original name was: 3300014970.a:Ga0169826_100220); c00033_3300014.. (original name was: 3300014970.a:Ga0169826_100297); c00034_3300014.. (original name was: 3300014970.a:Ga0169826_100103); c00035_3300014.. (original name was: 3300014970.a:Ga0169826_100244); c00036_3300014.. (original name was: 3300014970.a:Ga0169826_100388); c00037_3300014.. (original name was: 3300014970.a:Ga0169826_100097); c00038_3300014.. (original name was: 3300014970.a:Ga0169826_100144); c00039_3300014.. (original name was: 3300014970.a:Ga0169826_100012); c00040_3300014.. (original name was: 3300014970.a:Ga0169826_100247); c00042_3300014.. (original name was: 3300014970.a:Ga0169826_100160); c00043_3300014.. (original name was: 3300014970.a:Ga0169826_100207); c00044_3300014.. (original name was: 3300014970.a:Ga0169826_100193); c00045_3300014.. (original name was: 3300014970.a:Ga0169826_100096); c00046_3300014.. (original name was: 3300014970.a:Ga0169826_100190); c00047_3300014.. (original name was: 3300014970.a:Ga0169826_100237); c00048_3300014.. (original name was: 3300014970.a:Ga0169826_100022); c00049_3300014.. (original name was: 3300014970.a:Ga0169826_100062); c00050_3300014.. (original name was: 3300014970.a:Ga0169826_100494); c00051_3300014.. (original name was: 3300014970.a:Ga0169826_100203); c00052_3300014.. (original name was: 3300014970.a:Ga0169826_100278); c00053_3300014.. (original name was: 3300014970.a:Ga0169826_100084); c00054_3300014.. (original name was: 3300014970.a:Ga0169826_100225); c00055_3300014.. (original name was: 3300014970.a:Ga0169826_100369); c00056_3300014.. (original name was: 3300014970.a:Ga0169826_100272); c00057_3300014.. (original name was: 3300014970.a:Ga0169826_100164); c00058_3300014.. (original name was: 3300014970.a:Ga0169826_100082); c00059_3300014.. (original name was: 3300014970.a:Ga0169826_100377); c00060_3300014.. (original name was: 3300014970.a:Ga0169826_100280); c00061_3300014.. (original name was: 3300014970.a:Ga0169826_100086); c00063_3300014.. (original name was: 3300014970.a:Ga0169826_100274); c00064_3300014.. (original name was: 3300014970.a:Ga0169826_100170); c00065_3300014.. (original name was: 3300014970.a:Ga0169826_100766); c00066_3300014.. (original name was: 3300014970.a:Ga0169826_100184); c00067_3300014.. (original name was: 3300014970.a:Ga0169826_100095); c00068_3300014.. (original name was: 3300014970.a:Ga0169826_100192); c00069_3300014.. (original name was: 3300014970.a:Ga0169826_100201); c00070_3300014.. (original name was: 3300014970.a:Ga0169826_100204); c00071_3300014.. (original name was: 3300014970.a:Ga0169826_100521); c00072_3300014.. (original name was: 3300014970.a:Ga0169826_100230); c00073_3300014.. (original name was: 3300014970.a:Ga0169826_100138); c00074_3300014.. (original name was: 3300014970.a:Ga0169826_100235); c00075_3300014.. (original name was: 3300014970.a:Ga0169826_100446); c00076_3300014.. (original name was: 3300014970.a:Ga0169826_100155); c00077_3300014.. (original name was: 3300014970.a:Ga0169826_100252); c00078_3300014.. (original name was: 3300014970.a:Ga0169826_100268)

Compact view

c00007_3300014.. - Region 1 - NRPS

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Location: 1 - 10,848 nt. (total: 10,848 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10848:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg7_8

Search NORINE for peptide: strict or relaxed

AMP-binding (20..419): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLtdgGIsK
Nearest Stachelhaus code:: aeo
Stachelhaus code match:: 60% (weak)

c00028_3300014.. - Region 1 - sactipeptide

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Location: 54,301 - 74,441 nt. (total: 20,141 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.

c00030_3300014.. - Region 1 - NRPS

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Location: 47,099 - 73,979 nt. (total: 26,881 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 47098 - 73979:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg30_71

Search NORINE for peptide: strict or relaxed

AMP-binding (314..702): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmfsGAIfK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 60% (weak)

AMP-binding (1308..1699): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAiTTGgVsK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 70% (weak)

c00041_3300014.. - Region 1 - lanthipeptide

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Location: 75,267 - 97,927 nt. (total: 22,661 nt) Show pHMM detection rules used

lanthipeptide: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C) or cds(LANC_like and (Pkinase or DUF4135))) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

Lanthipeptide predictions

Lanthipeptide(s) for ctg41_90 - Putative Class II

ctg41_91 leader / core peptide: MKNNEKNFIGDINKELEEIEKLDILEEIEESLLTMLGS - VNDhaLFCCH

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lanthipeptides

Core peptide predictions

ctg41_91 - Class II: Cleavage pHMM score: -3.20; RODEO score: 0; Monoisotopic mass: 903.4 Da; Molecular weight: 904.1 Da; Number of bridges: 1

c00062_3300014.. - Region 1 - NRPS

Download region GenBank file

Location: 30,380 - 54,429 nt. (total: 24,050 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains