3300017494_32 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00010_3300017.. (original name was: 3300017494.a:Ga0185337_1000115)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	NRPS	57,117	98,730

c00018_3300017.. (original name was: 3300017494.a:Ga0185337_1000292)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	bacteriocin	1	8,453

Region	Type	From	To	Most similar known cluster	Similarity
Region 10.1	NRPS	57,117	98,730
Region 18.1	bacteriocin	1	8,453

No secondary metabolite regions were found in these records:: c00001_3300017.. (original name was: 3300017494.a:Ga0185337_1002355); c00002_3300017.. (original name was: 3300017494.a:Ga0185337_1000235); c00003_3300017.. (original name was: 3300017494.a:Ga0185337_1000615); c00004_3300017.. (original name was: 3300017494.a:Ga0185337_1003913); c00005_3300017.. (original name was: 3300017494.a:Ga0185337_1000274); c00006_3300017.. (original name was: 3300017494.a:Ga0185337_1000504); c00007_3300017.. (original name was: 3300017494.a:Ga0185337_1000880); c00008_3300017.. (original name was: 3300017494.a:Ga0185337_1000333); c00009_3300017.. (original name was: 3300017494.a:Ga0185337_1008481); c00011_3300017.. (original name was: 3300017494.a:Ga0185337_1001360); c00012_3300017.. (original name was: 3300017494.a:Ga0185337_1001031); c00013_3300017.. (original name was: 3300017494.a:Ga0185337_1000091); c00014_3300017.. (original name was: 3300017494.a:Ga0185337_1004908); c00015_3300017.. (original name was: 3300017494.a:Ga0185337_1000637); c00016_3300017.. (original name was: 3300017494.a:Ga0185337_1001154); c00017_3300017.. (original name was: 3300017494.a:Ga0185337_1000453); c00019_3300017.. (original name was: 3300017494.a:Ga0185337_1003516); c00020_3300017.. (original name was: 3300017494.a:Ga0185337_1000414); c00021_3300017.. (original name was: 3300017494.a:Ga0185337_1000511); c00022_3300017.. (original name was: 3300017494.a:Ga0185337_1000561); c00023_3300017.. (original name was: 3300017494.a:Ga0185337_1000464); c00024_3300017.. (original name was: 3300017494.a:Ga0185337_1000898); c00025_3300017.. (original name was: 3300017494.a:Ga0185337_1001180); c00026_3300017.. (original name was: 3300017494.a:Ga0185337_1001249); c00027_3300017.. (original name was: 3300017494.a:Ga0185337_1001104); c00028_3300017.. (original name was: 3300017494.a:Ga0185337_1003213); c00029_3300017.. (original name was: 3300017494.a:Ga0185337_1002049); c00030_3300017.. (original name was: 3300017494.a:Ga0185337_1000273); c00031_3300017.. (original name was: 3300017494.a:Ga0185337_1000370); c00032_3300017.. (original name was: 3300017494.a:Ga0185337_1002504); c00033_3300017.. (original name was: 3300017494.a:Ga0185337_1000278); c00034_3300017.. (original name was: 3300017494.a:Ga0185337_1006382); c00035_3300017.. (original name was: 3300017494.a:Ga0185337_1000554); c00036_3300017.. (original name was: 3300017494.a:Ga0185337_1000294); c00037_3300017.. (original name was: 3300017494.a:Ga0185337_1000197); c00038_3300017.. (original name was: 3300017494.a:Ga0185337_1002472); c00039_3300017.. (original name was: 3300017494.a:Ga0185337_1000338); c00040_3300017.. (original name was: 3300017494.a:Ga0185337_1000535); c00041_3300017.. (original name was: 3300017494.a:Ga0185337_1013616); c00042_3300017.. (original name was: 3300017494.a:Ga0185337_1013817); c00043_3300017.. (original name was: 3300017494.a:Ga0185337_1006121); c00044_3300017.. (original name was: 3300017494.a:Ga0185337_1010292); c00045_3300017.. (original name was: 3300017494.a:Ga0185337_1001557); c00046_3300017.. (original name was: 3300017494.a:Ga0185337_1000420); c00047_3300017.. (original name was: 3300017494.a:Ga0185337_1000323); c00048_3300017.. (original name was: 3300017494.a:Ga0185337_1000129)

Compact view

c00010_3300017.. - Region 1 - NRPS

Download region GenBank file

Location: 57,117 - 98,730 nt. (total: 41,614 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 57116 - 98730:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg10_73

Search NORINE for peptide: strict or relaxed

AMP-binding (506..898): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DahIVGiaaK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 50% (weak)

c00018_3300017.. - Region 1 - bacteriocin