3300017518_52 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00019_3300017.. (original name was: 3300017518.a:Ga0185335_1000266)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	NRPS	57,117	98,730

c00034_3300017.. (original name was: 3300017518.a:Ga0185335_1000724)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	bacteriocin	1	8,433

Region	Type	From	To	Most similar known cluster	Similarity
Region 19.1	NRPS	57,117	98,730
Region 34.1	bacteriocin	1	8,433

No secondary metabolite regions were found in these records:: c00001_3300017.. (original name was: 3300017518.a:Ga0185335_1009158); c00002_3300017.. (original name was: 3300017518.a:Ga0185335_1000143); c00003_3300017.. (original name was: 3300017518.a:Ga0185335_1000947); c00004_3300017.. (original name was: 3300017518.a:Ga0185335_1000692); c00005_3300017.. (original name was: 3300017518.a:Ga0185335_1003898); c00006_3300017.. (original name was: 3300017518.a:Ga0185335_1007516); c00007_3300017.. (original name was: 3300017518.a:Ga0185335_1000813); c00008_3300017.. (original name was: 3300017518.a:Ga0185335_1001424); c00009_3300017.. (original name was: 3300017518.a:Ga0185335_1002573); c00010_3300017.. (original name was: 3300017518.a:Ga0185335_1003443); c00011_3300017.. (original name was: 3300017518.a:Ga0185335_1003570); c00012_3300017.. (original name was: 3300017518.a:Ga0185335_1000286); c00013_3300017.. (original name was: 3300017518.a:Ga0185335_1000227); c00014_3300017.. (original name was: 3300017518.a:Ga0185335_1001026); c00015_3300017.. (original name was: 3300017518.a:Ga0185335_1001302); c00016_3300017.. (original name was: 3300017518.a:Ga0185335_1000596); c00017_3300017.. (original name was: 3300017518.a:Ga0185335_1004897); c00018_3300017.. (original name was: 3300017518.a:Ga0185335_1000783); c00020_3300017.. (original name was: 3300017518.a:Ga0185335_1001058); c00021_3300017.. (original name was: 3300017518.a:Ga0185335_1002844); c00022_3300017.. (original name was: 3300017518.a:Ga0185335_1002039); c00023_3300017.. (original name was: 3300017518.a:Ga0185335_1001081); c00024_3300017.. (original name was: 3300017518.a:Ga0185335_1001175); c00025_3300017.. (original name was: 3300017518.a:Ga0185335_1000470); c00026_3300017.. (original name was: 3300017518.a:Ga0185335_1001129); c00027_3300017.. (original name was: 3300017518.a:Ga0185335_1002492); c00028_3300017.. (original name was: 3300017518.a:Ga0185335_1000800); c00029_3300017.. (original name was: 3300017518.a:Ga0185335_1031172); c00030_3300017.. (original name was: 3300017518.a:Ga0185335_1002831); c00031_3300017.. (original name was: 3300017518.a:Ga0185335_1000763); c00032_3300017.. (original name was: 3300017518.a:Ga0185335_1000575); c00033_3300017.. (original name was: 3300017518.a:Ga0185335_1001938); c00035_3300017.. (original name was: 3300017518.a:Ga0185335_1001292); c00036_3300017.. (original name was: 3300017518.a:Ga0185335_1002326); c00037_3300017.. (original name was: 3300017518.a:Ga0185335_1006758); c00038_3300017.. (original name was: 3300017518.a:Ga0185335_1006511); c00039_3300017.. (original name was: 3300017518.a:Ga0185335_1001435); c00040_3300017.. (original name was: 3300017518.a:Ga0185335_1000824); c00041_3300017.. (original name was: 3300017518.a:Ga0185335_1015483); c00042_3300017.. (original name was: 3300017518.a:Ga0185335_1002753); c00043_3300017.. (original name was: 3300017518.a:Ga0185335_1002627); c00044_3300017.. (original name was: 3300017518.a:Ga0185335_1001086)

Compact view

c00019_3300017.. - Region 1 - NRPS

Download region GenBank file

Location: 57,117 - 98,730 nt. (total: 41,614 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 57116 - 98730:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg19_73

Search NORINE for peptide: strict or relaxed

AMP-binding (506..898): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DahIVGiaaK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 50% (weak)

c00034_3300017.. - Region 1 - bacteriocin