3300021285_6 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00020_3300021.. (original name was: 3300021285.a:Ga0214509_1000703)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	sactipeptide	1	7,621

c00118_3300021.. (original name was: 3300021285.a:Ga0214509_1000288)

Region	Type	From	To	Most similar known cluster		Similarity
Region 118.1	NRPS	1	16,853

Region	Type	From	To	Most similar known cluster	Similarity
Region 20.1	sactipeptide	1	7,621
Region 118.1	NRPS	1	16,853

No secondary metabolite regions were found in these records:: c00001_3300021.. (original name was: 3300021285.a:Ga0214509_1002932); c00002_3300021.. (original name was: 3300021285.a:Ga0214509_1002336); c00003_3300021.. (original name was: 3300021285.a:Ga0214509_1002316); c00004_3300021.. (original name was: 3300021285.a:Ga0214509_1002301); c00005_3300021.. (original name was: 3300021285.a:Ga0214509_1001863); c00006_3300021.. (original name was: 3300021285.a:Ga0214509_1001847); c00007_3300021.. (original name was: 3300021285.a:Ga0214509_1001678); c00008_3300021.. (original name was: 3300021285.a:Ga0214509_1001605); c00009_3300021.. (original name was: 3300021285.a:Ga0214509_1001450); c00010_3300021.. (original name was: 3300021285.a:Ga0214509_1001252); c00011_3300021.. (original name was: 3300021285.a:Ga0214509_1001238); c00012_3300021.. (original name was: 3300021285.a:Ga0214509_1001177); c00013_3300021.. (original name was: 3300021285.a:Ga0214509_1001120); c00014_3300021.. (original name was: 3300021285.a:Ga0214509_1001010); c00015_3300021.. (original name was: 3300021285.a:Ga0214509_1000990); c00016_3300021.. (original name was: 3300021285.a:Ga0214509_1000789); c00017_3300021.. (original name was: 3300021285.a:Ga0214509_1000763); c00018_3300021.. (original name was: 3300021285.a:Ga0214509_1000756); c00019_3300021.. (original name was: 3300021285.a:Ga0214509_1000730); c00021_3300021.. (original name was: 3300021285.a:Ga0214509_1000664); c00022_3300021.. (original name was: 3300021285.a:Ga0214509_1001047); c00023_3300021.. (original name was: 3300021285.a:Ga0214509_1000648); c00024_3300021.. (original name was: 3300021285.a:Ga0214509_1000896); c00025_3300021.. (original name was: 3300021285.a:Ga0214509_1002442); c00026_3300021.. (original name was: 3300021285.a:Ga0214509_1000766); c00027_3300021.. (original name was: 3300021285.a:Ga0214509_1000666); c00028_3300021.. (original name was: 3300021285.a:Ga0214509_1000184); c00029_3300021.. (original name was: 3300021285.a:Ga0214509_1000537); c00030_3300021.. (original name was: 3300021285.a:Ga0214509_1000924); c00031_3300021.. (original name was: 3300021285.a:Ga0214509_1002396); c00032_3300021.. (original name was: 3300021285.a:Ga0214509_1000804); c00033_3300021.. (original name was: 3300021285.a:Ga0214509_1001118); c00034_3300021.. (original name was: 3300021285.a:Ga0214509_1000524); c00035_3300021.. (original name was: 3300021285.a:Ga0214509_1000396); c00036_3300021.. (original name was: 3300021285.a:Ga0214509_1000854); c00037_3300021.. (original name was: 3300021285.a:Ga0214509_1001359); c00038_3300021.. (original name was: 3300021285.a:Ga0214509_1000876); c00039_3300021.. (original name was: 3300021285.a:Ga0214509_1000478); c00040_3300021.. (original name was: 3300021285.a:Ga0214509_1000090); c00041_3300021.. (original name was: 3300021285.a:Ga0214509_1000434); c00042_3300021.. (original name was: 3300021285.a:Ga0214509_1000823); c00043_3300021.. (original name was: 3300021285.a:Ga0214509_1000362); c00044_3300021.. (original name was: 3300021285.a:Ga0214509_1000214); c00045_3300021.. (original name was: 3300021285.a:Ga0214509_1001487); c00046_3300021.. (original name was: 3300021285.a:Ga0214509_1000209); c00047_3300021.. (original name was: 3300021285.a:Ga0214509_1001097); c00048_3300021.. (original name was: 3300021285.a:Ga0214509_1000300); c00049_3300021.. (original name was: 3300021285.a:Ga0214509_1002148); c00050_3300021.. (original name was: 3300021285.a:Ga0214509_1000159); c00051_3300021.. (original name was: 3300021285.a:Ga0214509_1000546); c00052_3300021.. (original name was: 3300021285.a:Ga0214509_1001625); c00053_3300021.. (original name was: 3300021285.a:Ga0214509_1000346); c00054_3300021.. (original name was: 3300021285.a:Ga0214509_1000819); c00055_3300021.. (original name was: 3300021285.a:Ga0214509_1000735); c00056_3300021.. (original name was: 3300021285.a:Ga0214509_1000726); c00057_3300021.. (original name was: 3300021285.a:Ga0214509_1000413); c00058_3300021.. (original name was: 3300021285.a:Ga0214509_1000303); c00059_3300021.. (original name was: 3300021285.a:Ga0214509_1000942); c00060_3300021.. (original name was: 3300021285.a:Ga0214509_1000360); c00061_3300021.. (original name was: 3300021285.a:Ga0214509_1001070); c00062_3300021.. (original name was: 3300021285.a:Ga0214509_1000191); c00063_3300021.. (original name was: 3300021285.a:Ga0214509_1000451); c00064_3300021.. (original name was: 3300021285.a:Ga0214509_1000157); c00065_3300021.. (original name was: 3300021285.a:Ga0214509_1001903); c00066_3300021.. (original name was: 3300021285.a:Ga0214509_1000559); c00067_3300021.. (original name was: 3300021285.a:Ga0214509_1000276); c00068_3300021.. (original name was: 3300021285.a:Ga0214509_1000172); c00069_3300021.. (original name was: 3300021285.a:Ga0214509_1000089); c00070_3300021.. (original name was: 3300021285.a:Ga0214509_1001383); c00071_3300021.. (original name was: 3300021285.a:Ga0214509_1001114); c00072_3300021.. (original name was: 3300021285.a:Ga0214509_1000319); c00073_3300021.. (original name was: 3300021285.a:Ga0214509_1000096); c00074_3300021.. (original name was: 3300021285.a:Ga0214509_1000578); c00075_3300021.. (original name was: 3300021285.a:Ga0214509_1000447); c00076_3300021.. (original name was: 3300021285.a:Ga0214509_1000258); c00077_3300021.. (original name was: 3300021285.a:Ga0214509_1000775); c00078_3300021.. (original name was: 3300021285.a:Ga0214509_1000304); c00079_3300021.. (original name was: 3300021285.a:Ga0214509_1000265); c00080_3300021.. (original name was: 3300021285.a:Ga0214509_1000317); c00081_3300021.. (original name was: 3300021285.a:Ga0214509_1000576); c00082_3300021.. (original name was: 3300021285.a:Ga0214509_1000522); c00083_3300021.. (original name was: 3300021285.a:Ga0214509_1000817); c00084_3300021.. (original name was: 3300021285.a:Ga0214509_1000335); c00085_3300021.. (original name was: 3300021285.a:Ga0214509_1000355); c00086_3300021.. (original name was: 3300021285.a:Ga0214509_1000142); c00087_3300021.. (original name was: 3300021285.a:Ga0214509_1000226); c00088_3300021.. (original name was: 3300021285.a:Ga0214509_1000997); c00089_3300021.. (original name was: 3300021285.a:Ga0214509_1001167); c00090_3300021.. (original name was: 3300021285.a:Ga0214509_1000068); c00091_3300021.. (original name was: 3300021285.a:Ga0214509_1000515); c00092_3300021.. (original name was: 3300021285.a:Ga0214509_1001310); c00093_3300021.. (original name was: 3300021285.a:Ga0214509_1000387); c00094_3300021.. (original name was: 3300021285.a:Ga0214509_1001497); c00095_3300021.. (original name was: 3300021285.a:Ga0214509_1001624); c00096_3300021.. (original name was: 3300021285.a:Ga0214509_1001646); c00097_3300021.. (original name was: 3300021285.a:Ga0214509_1001126); c00098_3300021.. (original name was: 3300021285.a:Ga0214509_1001839); c00099_3300021.. (original name was: 3300021285.a:Ga0214509_1000158); c00100_3300021.. (original name was: 3300021285.a:Ga0214509_1001983); c00101_3300021.. (original name was: 3300021285.a:Ga0214509_1000077); c00102_3300021.. (original name was: 3300021285.a:Ga0214509_1000497); c00103_3300021.. (original name was: 3300021285.a:Ga0214509_1000412); c00104_3300021.. (original name was: 3300021285.a:Ga0214509_1000099); c00105_3300021.. (original name was: 3300021285.a:Ga0214509_1000105); c00106_3300021.. (original name was: 3300021285.a:Ga0214509_1000169); c00107_3300021.. (original name was: 3300021285.a:Ga0214509_1000363); c00108_3300021.. (original name was: 3300021285.a:Ga0214509_1000183); c00109_3300021.. (original name was: 3300021285.a:Ga0214509_1000531); c00110_3300021.. (original name was: 3300021285.a:Ga0214509_1000217); c00111_3300021.. (original name was: 3300021285.a:Ga0214509_1003007); c00112_3300021.. (original name was: 3300021285.a:Ga0214509_1000220); c00113_3300021.. (original name was: 3300021285.a:Ga0214509_1000239); c00114_3300021.. (original name was: 3300021285.a:Ga0214509_1000246); c00115_3300021.. (original name was: 3300021285.a:Ga0214509_1000440); c00116_3300021.. (original name was: 3300021285.a:Ga0214509_1000646); c00117_3300021.. (original name was: 3300021285.a:Ga0214509_1000248); c00119_3300021.. (original name was: 3300021285.a:Ga0214509_1000236); c00120_3300021.. (original name was: 3300021285.a:Ga0214509_1000634); c00121_3300021.. (original name was: 3300021285.a:Ga0214509_1000321); c00122_3300021.. (original name was: 3300021285.a:Ga0214509_1000329); c00123_3300021.. (original name was: 3300021285.a:Ga0214509_1000336); c00124_3300021.. (original name was: 3300021285.a:Ga0214509_1002028); c00125_3300021.. (original name was: 3300021285.a:Ga0214509_1000437); c00126_3300021.. (original name was: 3300021285.a:Ga0214509_1000379); c00127_3300021.. (original name was: 3300021285.a:Ga0214509_1002368); c00128_3300021.. (original name was: 3300021285.a:Ga0214509_1000462); c00129_3300021.. (original name was: 3300021285.a:Ga0214509_1000477); c00130_3300021.. (original name was: 3300021285.a:Ga0214509_1001711); c00131_3300021.. (original name was: 3300021285.a:Ga0214509_1000516); c00132_3300021.. (original name was: 3300021285.a:Ga0214509_1000534); c00133_3300021.. (original name was: 3300021285.a:Ga0214509_1000585); c00134_3300021.. (original name was: 3300021285.a:Ga0214509_1000587)

Compact view

c00020_3300021.. - Region 1 - sactipeptide

Download region GenBank file

Location: 1 - 7,621 nt. (total: 7,621 nt) Show pHMM detection rules used

Region on contig edge.

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.

c00118_3300021.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 16,853 nt. (total: 16,853 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 16853:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (val - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg118_5

Search NORINE for peptide: strict or relaxed

AMP-binding (434..820): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmLfGAVFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 80% (moderate)

AMP-binding (1435..1831): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQfdGgVtK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 60% (weak)