3300021306_37 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00032_3300021.. (original name was: 3300021306.a:Ga0214508_1000046)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	NRPS	77,498	124,721

c00038_3300021.. (original name was: 3300021306.a:Ga0214508_1000780)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	NRPS-like	1	22,951

Region	Type	From	To	Most similar known cluster	Similarity
Region 32.1	NRPS	77,498	124,721
Region 38.1	NRPS-like	1	22,951

No secondary metabolite regions were found in these records:: c00001_3300021.. (original name was: 3300021306.a:Ga0214508_1000954); c00002_3300021.. (original name was: 3300021306.a:Ga0214508_1000944); c00003_3300021.. (original name was: 3300021306.a:Ga0214508_1003787); c00004_3300021.. (original name was: 3300021306.a:Ga0214508_1001437); c00005_3300021.. (original name was: 3300021306.a:Ga0214508_1000654); c00006_3300021.. (original name was: 3300021306.a:Ga0214508_1003456); c00007_3300021.. (original name was: 3300021306.a:Ga0214508_1002940); c00008_3300021.. (original name was: 3300021306.a:Ga0214508_1002406); c00009_3300021.. (original name was: 3300021306.a:Ga0214508_1001452); c00010_3300021.. (original name was: 3300021306.a:Ga0214508_1006818); c00011_3300021.. (original name was: 3300021306.a:Ga0214508_1000300); c00012_3300021.. (original name was: 3300021306.a:Ga0214508_1002085); c00013_3300021.. (original name was: 3300021306.a:Ga0214508_1003465); c00014_3300021.. (original name was: 3300021306.a:Ga0214508_1001987); c00015_3300021.. (original name was: 3300021306.a:Ga0214508_1002890); c00016_3300021.. (original name was: 3300021306.a:Ga0214508_1005132); c00017_3300021.. (original name was: 3300021306.a:Ga0214508_1001372); c00018_3300021.. (original name was: 3300021306.a:Ga0214508_1002473); c00019_3300021.. (original name was: 3300021306.a:Ga0214508_1001285); c00020_3300021.. (original name was: 3300021306.a:Ga0214508_1001155); c00021_3300021.. (original name was: 3300021306.a:Ga0214508_1000834); c00022_3300021.. (original name was: 3300021306.a:Ga0214508_1002412); c00023_3300021.. (original name was: 3300021306.a:Ga0214508_1000906); c00024_3300021.. (original name was: 3300021306.a:Ga0214508_1000138); c00025_3300021.. (original name was: 3300021306.a:Ga0214508_1006418); c00026_3300021.. (original name was: 3300021306.a:Ga0214508_1001580); c00027_3300021.. (original name was: 3300021306.a:Ga0214508_1003072); c00028_3300021.. (original name was: 3300021306.a:Ga0214508_1000289); c00029_3300021.. (original name was: 3300021306.a:Ga0214508_1001647); c00030_3300021.. (original name was: 3300021306.a:Ga0214508_1000990); c00031_3300021.. (original name was: 3300021306.a:Ga0214508_1000403); c00033_3300021.. (original name was: 3300021306.a:Ga0214508_1000220); c00034_3300021.. (original name was: 3300021306.a:Ga0214508_1000910); c00035_3300021.. (original name was: 3300021306.a:Ga0214508_1008410); c00036_3300021.. (original name was: 3300021306.a:Ga0214508_1000303); c00037_3300021.. (original name was: 3300021306.a:Ga0214508_1000543)

Compact view

c00032_3300021.. - Region 1 - NRPS

Download region GenBank file

Location: 77,498 - 124,721 nt. (total: 47,224 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 77497 - 124721:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg32_110

Search NORINE for peptide: strict or relaxed

AMP-binding (436..821): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAflTGgiVK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 60% (weak)

AMP-binding (1434..1830): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DLqtdGgVsK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 50% (weak)

c00038_3300021.. - Region 1 - NRPS-like

Download region GenBank file

Location: 1 - 22,951 nt. (total: 22,951 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 22951:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg38_4

Search NORINE for peptide: strict or relaxed

AMP-binding (44..468): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: gFaYiGGVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)