3300024892_3 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00003_3300024.. (original name was: 3300024892.a:Ga0208509_1000568)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	arylpolyene	1	12,847

c00037_3300024.. (original name was: 3300024892.a:Ga0208509_1000109)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	hserlactone	1,463	22,167

c00094_3300024.. (original name was: 3300024892.a:Ga0208509_1000033)

Region	Type	From	To	Most similar known cluster		Similarity
Region 94.1	bacteriocin	63,220	74,071

c00099_3300024.. (original name was: 3300024892.a:Ga0208509_1001428)

Region	Type	From	To	Most similar known cluster		Similarity
Region 99.1	NRPS-like	1	7,506

c00103_3300024.. (original name was: 3300024892.a:Ga0208509_1000248)

Region	Type	From	To	Most similar known cluster		Similarity
Region 103.1	NRPS	1	21,464

c00129_3300024.. (original name was: 3300024892.a:Ga0208509_1003401)

Region	Type	From	To	Most similar known cluster		Similarity
Region 129.1	arylpolyene	1	4,159

c00135_3300024.. (original name was: 3300024892.a:Ga0208509_1001297)

Region	Type	From	To	Most similar known cluster		Similarity
Region 135.1	bacteriocin	1	7,976

c00160_3300024.. (original name was: 3300024892.a:Ga0208509_1000124)

Region	Type	From	To	Most similar known cluster		Similarity
Region 160.1	terpene	13,843	33,864

Region	Type	From	To	Similarity
Region 3.1	arylpolyene	1	12,847
Region 37.1	hserlactone	1,463	22,167
Region 94.1	bacteriocin	63,220	74,071
Region 99.1	NRPS-like	1	7,506
Region 103.1	NRPS	1	21,464
Region 129.1	arylpolyene	1	4,159
Region 135.1	bacteriocin	1	7,976
Region 160.1	terpene	13,843	33,864

No secondary metabolite regions were found in these records:: c00001_3300024.. (original name was: 3300024892.a:Ga0208509_1002798); c00002_3300024.. (original name was: 3300024892.a:Ga0208509_1000602); c00004_3300024.. (original name was: 3300024892.a:Ga0208509_1000434); c00005_3300024.. (original name was: 3300024892.a:Ga0208509_1001600); c00006_3300024.. (original name was: 3300024892.a:Ga0208509_1000406); c00007_3300024.. (original name was: 3300024892.a:Ga0208509_1000395); c00008_3300024.. (original name was: 3300024892.a:Ga0208509_1000371); c00009_3300024.. (original name was: 3300024892.a:Ga0208509_1001614); c00010_3300024.. (original name was: 3300024892.a:Ga0208509_1000839); c00011_3300024.. (original name was: 3300024892.a:Ga0208509_1004440); c00012_3300024.. (original name was: 3300024892.a:Ga0208509_1003066); c00013_3300024.. (original name was: 3300024892.a:Ga0208509_1001446); c00014_3300024.. (original name was: 3300024892.a:Ga0208509_1000144); c00015_3300024.. (original name was: 3300024892.a:Ga0208509_1000120); c00016_3300024.. (original name was: 3300024892.a:Ga0208509_1000553); c00017_3300024.. (original name was: 3300024892.a:Ga0208509_1000167); c00018_3300024.. (original name was: 3300024892.a:Ga0208509_1002183); c00019_3300024.. (original name was: 3300024892.a:Ga0208509_1001387); c00020_3300024.. (original name was: 3300024892.a:Ga0208509_1000040); c00021_3300024.. (original name was: 3300024892.a:Ga0208509_1000435); c00022_3300024.. (original name was: 3300024892.a:Ga0208509_1000356); c00023_3300024.. (original name was: 3300024892.a:Ga0208509_1000126); c00024_3300024.. (original name was: 3300024892.a:Ga0208509_1000413); c00025_3300024.. (original name was: 3300024892.a:Ga0208509_1002729); c00026_3300024.. (original name was: 3300024892.a:Ga0208509_1004426); c00027_3300024.. (original name was: 3300024892.a:Ga0208509_1000844); c00028_3300024.. (original name was: 3300024892.a:Ga0208509_1000473); c00029_3300024.. (original name was: 3300024892.a:Ga0208509_1001245); c00030_3300024.. (original name was: 3300024892.a:Ga0208509_1000488); c00031_3300024.. (original name was: 3300024892.a:Ga0208509_1000681); c00032_3300024.. (original name was: 3300024892.a:Ga0208509_1002106); c00033_3300024.. (original name was: 3300024892.a:Ga0208509_1000116); c00034_3300024.. (original name was: 3300024892.a:Ga0208509_1004555); c00035_3300024.. (original name was: 3300024892.a:Ga0208509_1000309); c00036_3300024.. (original name was: 3300024892.a:Ga0208509_1001900); c00038_3300024.. (original name was: 3300024892.a:Ga0208509_1000505); c00039_3300024.. (original name was: 3300024892.a:Ga0208509_1000119); c00040_3300024.. (original name was: 3300024892.a:Ga0208509_1001114); c00041_3300024.. (original name was: 3300024892.a:Ga0208509_1000069); c00042_3300024.. (original name was: 3300024892.a:Ga0208509_1000111); c00043_3300024.. (original name was: 3300024892.a:Ga0208509_1000304); c00044_3300024.. (original name was: 3300024892.a:Ga0208509_1001848); c00045_3300024.. (original name was: 3300024892.a:Ga0208509_1000180); c00046_3300024.. (original name was: 3300024892.a:Ga0208509_1000725); c00047_3300024.. (original name was: 3300024892.a:Ga0208509_1000154); c00048_3300024.. (original name was: 3300024892.a:Ga0208509_1000751); c00049_3300024.. (original name was: 3300024892.a:Ga0208509_1000169); c00050_3300024.. (original name was: 3300024892.a:Ga0208509_1000101); c00051_3300024.. (original name was: 3300024892.a:Ga0208509_1000489); c00052_3300024.. (original name was: 3300024892.a:Ga0208509_1000198); c00053_3300024.. (original name was: 3300024892.a:Ga0208509_1001880); c00054_3300024.. (original name was: 3300024892.a:Ga0208509_1000115); c00055_3300024.. (original name was: 3300024892.a:Ga0208509_1004891); c00056_3300024.. (original name was: 3300024892.a:Ga0208509_1000041); c00057_3300024.. (original name was: 3300024892.a:Ga0208509_1000329); c00058_3300024.. (original name was: 3300024892.a:Ga0208509_1000320); c00059_3300024.. (original name was: 3300024892.a:Ga0208509_1000519); c00060_3300024.. (original name was: 3300024892.a:Ga0208509_1000034); c00061_3300024.. (original name was: 3300024892.a:Ga0208509_1000131); c00062_3300024.. (original name was: 3300024892.a:Ga0208509_1005362); c00063_3300024.. (original name was: 3300024892.a:Ga0208509_1000586); c00064_3300024.. (original name was: 3300024892.a:Ga0208509_1001780); c00065_3300024.. (original name was: 3300024892.a:Ga0208509_1002658); c00066_3300024.. (original name was: 3300024892.a:Ga0208509_1000071); c00067_3300024.. (original name was: 3300024892.a:Ga0208509_1000462); c00068_3300024.. (original name was: 3300024892.a:Ga0208509_1003081); c00069_3300024.. (original name was: 3300024892.a:Ga0208509_1000797); c00070_3300024.. (original name was: 3300024892.a:Ga0208509_1000399); c00071_3300024.. (original name was: 3300024892.a:Ga0208509_1001996); c00072_3300024.. (original name was: 3300024892.a:Ga0208509_1000205); c00073_3300024.. (original name was: 3300024892.a:Ga0208509_1000496); c00074_3300024.. (original name was: 3300024892.a:Ga0208509_1000047); c00075_3300024.. (original name was: 3300024892.a:Ga0208509_1001241); c00076_3300024.. (original name was: 3300024892.a:Ga0208509_1000583); c00077_3300024.. (original name was: 3300024892.a:Ga0208509_1000190); c00078_3300024.. (original name was: 3300024892.a:Ga0208509_1000389); c00079_3300024.. (original name was: 3300024892.a:Ga0208509_1000287); c00080_3300024.. (original name was: 3300024892.a:Ga0208509_1000486); c00081_3300024.. (original name was: 3300024892.a:Ga0208509_1000934); c00082_3300024.. (original name was: 3300024892.a:Ga0208509_1000138); c00083_3300024.. (original name was: 3300024892.a:Ga0208509_1000337); c00084_3300024.. (original name was: 3300024892.a:Ga0208509_1000199); c00085_3300024.. (original name was: 3300024892.a:Ga0208509_1000029); c00086_3300024.. (original name was: 3300024892.a:Ga0208509_1000427); c00087_3300024.. (original name was: 3300024892.a:Ga0208509_1000286); c00088_3300024.. (original name was: 3300024892.a:Ga0208509_1000429); c00089_3300024.. (original name was: 3300024892.a:Ga0208509_1000230); c00090_3300024.. (original name was: 3300024892.a:Ga0208509_1004404); c00091_3300024.. (original name was: 3300024892.a:Ga0208509_1000424); c00092_3300024.. (original name was: 3300024892.a:Ga0208509_1002421); c00093_3300024.. (original name was: 3300024892.a:Ga0208509_1000232); c00095_3300024.. (original name was: 3300024892.a:Ga0208509_1000677); c00096_3300024.. (original name was: 3300024892.a:Ga0208509_1000478); c00097_3300024.. (original name was: 3300024892.a:Ga0208509_1002070); c00098_3300024.. (original name was: 3300024892.a:Ga0208509_1000632); c00100_3300024.. (original name was: 3300024892.a:Ga0208509_1000065); c00101_3300024.. (original name was: 3300024892.a:Ga0208509_1000055); c00102_3300024.. (original name was: 3300024892.a:Ga0208509_1000453); c00104_3300024.. (original name was: 3300024892.a:Ga0208509_1000151); c00105_3300024.. (original name was: 3300024892.a:Ga0208509_1001564); c00106_3300024.. (original name was: 3300024892.a:Ga0208509_1000182); c00107_3300024.. (original name was: 3300024892.a:Ga0208509_1001376); c00108_3300024.. (original name was: 3300024892.a:Ga0208509_1005250); c00109_3300024.. (original name was: 3300024892.a:Ga0208509_1000076); c00110_3300024.. (original name was: 3300024892.a:Ga0208509_1002501); c00111_3300024.. (original name was: 3300024892.a:Ga0208509_1000123); c00112_3300024.. (original name was: 3300024892.a:Ga0208509_1000891); c00113_3300024.. (original name was: 3300024892.a:Ga0208509_1005070); c00114_3300024.. (original name was: 3300024892.a:Ga0208509_1002301); c00115_3300024.. (original name was: 3300024892.a:Ga0208509_1000311); c00116_3300024.. (original name was: 3300024892.a:Ga0208509_1003209); c00117_3300024.. (original name was: 3300024892.a:Ga0208509_1000017); c00118_3300024.. (original name was: 3300024892.a:Ga0208509_1001198); c00119_3300024.. (original name was: 3300024892.a:Ga0208509_1000601); c00120_3300024.. (original name was: 3300024892.a:Ga0208509_1000140); c00121_3300024.. (original name was: 3300024892.a:Ga0208509_1002177); c00122_3300024.. (original name was: 3300024892.a:Ga0208509_1001328); c00123_3300024.. (original name was: 3300024892.a:Ga0208509_1000333); c00124_3300024.. (original name was: 3300024892.a:Ga0208509_1002661); c00125_3300024.. (original name was: 3300024892.a:Ga0208509_1000085); c00126_3300024.. (original name was: 3300024892.a:Ga0208509_1000284); c00127_3300024.. (original name was: 3300024892.a:Ga0208509_1000281); c00128_3300024.. (original name was: 3300024892.a:Ga0208509_1000364); c00130_3300024.. (original name was: 3300024892.a:Ga0208509_1003998); c00131_3300024.. (original name was: 3300024892.a:Ga0208509_1002207); c00132_3300024.. (original name was: 3300024892.a:Ga0208509_1000127); c00133_3300024.. (original name was: 3300024892.a:Ga0208509_1002117); c00134_3300024.. (original name was: 3300024892.a:Ga0208509_1000760); c00136_3300024.. (original name was: 3300024892.a:Ga0208509_1000103); c00137_3300024.. (original name was: 3300024892.a:Ga0208509_1001660); c00138_3300024.. (original name was: 3300024892.a:Ga0208509_1001461); c00139_3300024.. (original name was: 3300024892.a:Ga0208509_1000495); c00140_3300024.. (original name was: 3300024892.a:Ga0208509_1000097); c00141_3300024.. (original name was: 3300024892.a:Ga0208509_1001358); c00142_3300024.. (original name was: 3300024892.a:Ga0208509_1000970); c00143_3300024.. (original name was: 3300024892.a:Ga0208509_1000291); c00144_3300024.. (original name was: 3300024892.a:Ga0208509_1002799); c00145_3300024.. (original name was: 3300024892.a:Ga0208509_1001675); c00146_3300024.. (original name was: 3300024892.a:Ga0208509_1001874); c00147_3300024.. (original name was: 3300024892.a:Ga0208509_1000086); c00148_3300024.. (original name was: 3300024892.a:Ga0208509_1000972); c00149_3300024.. (original name was: 3300024892.a:Ga0208509_1000584); c00150_3300024.. (original name was: 3300024892.a:Ga0208509_1004919); c00151_3300024.. (original name was: 3300024892.a:Ga0208509_1004123); c00152_3300024.. (original name was: 3300024892.a:Ga0208509_1000269); c00153_3300024.. (original name was: 3300024892.a:Ga0208509_1003851); c00154_3300024.. (original name was: 3300024892.a:Ga0208509_1004237); c00155_3300024.. (original name was: 3300024892.a:Ga0208509_1000299); c00156_3300024.. (original name was: 3300024892.a:Ga0208509_1000100); c00157_3300024.. (original name was: 3300024892.a:Ga0208509_1000192); c00158_3300024.. (original name was: 3300024892.a:Ga0208509_1000391); c00159_3300024.. (original name was: 3300024892.a:Ga0208509_1000522); c00161_3300024.. (original name was: 3300024892.a:Ga0208509_1001549); c00162_3300024.. (original name was: 3300024892.a:Ga0208509_1000547); c00163_3300024.. (original name was: 3300024892.a:Ga0208509_1000125); c00164_3300024.. (original name was: 3300024892.a:Ga0208509_1000418); c00165_3300024.. (original name was: 3300024892.a:Ga0208509_1004000); c00166_3300024.. (original name was: 3300024892.a:Ga0208509_1000617); c00167_3300024.. (original name was: 3300024892.a:Ga0208509_1000056); c00168_3300024.. (original name was: 3300024892.a:Ga0208509_1002256); c00169_3300024.. (original name was: 3300024892.a:Ga0208509_1001261); c00170_3300024.. (original name was: 3300024892.a:Ga0208509_1000067)

Compact view

c00003_3300024.. - Region 1 - arylpolyene

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Location: 1 - 12,847 nt. (total: 12,847 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00037_3300024.. - Region 1 - hserlactone

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Location: 1,463 - 22,167 nt. (total: 20,705 nt) Show pHMM detection rules used

hserlactone: Autoind_synth

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00094_3300024.. - Region 1 - bacteriocin

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Location: 63,220 - 74,071 nt. (total: 10,852 nt) Show pHMM detection rules used

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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c00099_3300024.. - Region 1 - NRPS-like

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Location: 1 - 7,506 nt. (total: 7,506 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

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regulatory genes

other genes

resistance

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 7506:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg99_9

Search NORINE for peptide: strict or relaxed

AMP-binding (19..412): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ggrtrgGLIK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 40% (weak)

c00103_3300024.. - Region 1 - NRPS

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Location: 1 - 21,464 nt. (total: 21,464 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 21464:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg103_8

Search NORINE for peptide: strict or relaxed

AMP-binding (490..888): X

NRPSPredictor2: ile, val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAFWLGCTFK
Nearest Stachelhaus code:: val, ile
Stachelhaus code match:: 100% (strong)

c00129_3300024.. - Region 1 - arylpolyene

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Location: 1 - 4,159 nt. (total: 4,159 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00135_3300024.. - Region 1 - bacteriocin

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Location: 1 - 7,976 nt. (total: 7,976 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00160_3300024.. - Region 1 - terpene

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Location: 13,843 - 33,864 nt. (total: 20,022 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it