3300025105_8 - 10 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00024_3300025.. (original name was: 3300025105.a:Ga0209479_1001061)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	T3PKS	1	21,247

c00025_3300025.. (original name was: 3300025105.a:Ga0209479_1000770)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	T1PKS,NRPS	5,580	43,267

c00035_3300025.. (original name was: 3300025105.a:Ga0209479_1000606)

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	bacteriocin	44,455	52,824

c00069_3300025.. (original name was: 3300025105.a:Ga0209479_1001156)

Region	Type	From	To	Most similar known cluster		Similarity
Region 69.1	T1PKS,hglE-KS	1	28,981

c00081_3300025.. (original name was: 3300025105.a:Ga0209479_1007750)

Region	Type	From	To	Most similar known cluster		Similarity
Region 81.1	terpene	1	3,706

c00120_3300025.. (original name was: 3300025105.a:Ga0209479_1002629)

Region	Type	From	To	Most similar known cluster		Similarity
Region 120.1	terpene	649	12,039

c00127_3300025.. (original name was: 3300025105.a:Ga0209479_1000979)

Region	Type	From	To	Most similar known cluster		Similarity
Region 127.1	acyl_amino_acids	1	33,528

c00130_3300025.. (original name was: 3300025105.a:Ga0209479_1002824)

Region	Type	From	To	Most similar known cluster		Similarity
Region 130.1	phosphonate	1	11,046

c00144_3300025.. (original name was: 3300025105.a:Ga0209479_1000491)

Region	Type	From	To	Most similar known cluster		Similarity
Region 144.1	ladderane	1	24,335

c00157_3300025.. (original name was: 3300025105.a:Ga0209479_1009285)

Region	Type	From	To	Most similar known cluster		Similarity
Region 157.1	terpene	1	3,136

Region	Type	From	To	Similarity
Region 24.1	T3PKS	1	21,247
Region 25.1	T1PKS,NRPS	5,580	43,267
Region 35.1	bacteriocin	44,455	52,824
Region 69.1	T1PKS,hglE-KS	1	28,981
Region 81.1	terpene	1	3,706
Region 120.1	terpene	649	12,039
Region 127.1	acyl_amino_acids	1	33,528
Region 130.1	phosphonate	1	11,046
Region 144.1	ladderane	1	24,335
Region 157.1	terpene	1	3,136

No secondary metabolite regions were found in these records:: c00001_3300025.. (original name was: 3300025105.a:Ga0209479_1002037); c00002_3300025.. (original name was: 3300025105.a:Ga0209479_1008093); c00003_3300025.. (original name was: 3300025105.a:Ga0209479_1002322); c00004_3300025.. (original name was: 3300025105.a:Ga0209479_1001798); c00005_3300025.. (original name was: 3300025105.a:Ga0209479_1003181); c00006_3300025.. (original name was: 3300025105.a:Ga0209479_1009654); c00007_3300025.. (original name was: 3300025105.a:Ga0209479_1007121); c00008_3300025.. (original name was: 3300025105.a:Ga0209479_1009479); c00009_3300025.. (original name was: 3300025105.a:Ga0209479_1002912); c00010_3300025.. (original name was: 3300025105.a:Ga0209479_1001515); c00011_3300025.. (original name was: 3300025105.a:Ga0209479_1004378); c00012_3300025.. (original name was: 3300025105.a:Ga0209479_1001759); c00013_3300025.. (original name was: 3300025105.a:Ga0209479_1001111); c00014_3300025.. (original name was: 3300025105.a:Ga0209479_1001192); c00015_3300025.. (original name was: 3300025105.a:Ga0209479_1001331); c00016_3300025.. (original name was: 3300025105.a:Ga0209479_1001417); c00017_3300025.. (original name was: 3300025105.a:Ga0209479_1002096); c00018_3300025.. (original name was: 3300025105.a:Ga0209479_1001110); c00019_3300025.. (original name was: 3300025105.a:Ga0209479_1000140); c00020_3300025.. (original name was: 3300025105.a:Ga0209479_1008488); c00021_3300025.. (original name was: 3300025105.a:Ga0209479_1001722); c00022_3300025.. (original name was: 3300025105.a:Ga0209479_1003177); c00023_3300025.. (original name was: 3300025105.a:Ga0209479_1001326); c00026_3300025.. (original name was: 3300025105.a:Ga0209479_1000732); c00027_3300025.. (original name was: 3300025105.a:Ga0209479_1002478); c00028_3300025.. (original name was: 3300025105.a:Ga0209479_1002506); c00029_3300025.. (original name was: 3300025105.a:Ga0209479_1000563); c00030_3300025.. (original name was: 3300025105.a:Ga0209479_1000338); c00031_3300025.. (original name was: 3300025105.a:Ga0209479_1002792); c00032_3300025.. (original name was: 3300025105.a:Ga0209479_1003225); c00033_3300025.. (original name was: 3300025105.a:Ga0209479_1000750); c00034_3300025.. (original name was: 3300025105.a:Ga0209479_1001004); c00036_3300025.. (original name was: 3300025105.a:Ga0209479_1001089); c00037_3300025.. (original name was: 3300025105.a:Ga0209479_1000492); c00038_3300025.. (original name was: 3300025105.a:Ga0209479_1001487); c00039_3300025.. (original name was: 3300025105.a:Ga0209479_1003273); c00040_3300025.. (original name was: 3300025105.a:Ga0209479_1001915); c00041_3300025.. (original name was: 3300025105.a:Ga0209479_1002785); c00042_3300025.. (original name was: 3300025105.a:Ga0209479_1007538); c00043_3300025.. (original name was: 3300025105.a:Ga0209479_1001888); c00044_3300025.. (original name was: 3300025105.a:Ga0209479_1004057); c00045_3300025.. (original name was: 3300025105.a:Ga0209479_1002664); c00046_3300025.. (original name was: 3300025105.a:Ga0209479_1002261); c00047_3300025.. (original name was: 3300025105.a:Ga0209479_1000498); c00048_3300025.. (original name was: 3300025105.a:Ga0209479_1007662); c00049_3300025.. (original name was: 3300025105.a:Ga0209479_1003264); c00050_3300025.. (original name was: 3300025105.a:Ga0209479_1008479); c00051_3300025.. (original name was: 3300025105.a:Ga0209479_1000607); c00052_3300025.. (original name was: 3300025105.a:Ga0209479_1001204); c00053_3300025.. (original name was: 3300025105.a:Ga0209479_1009707); c00054_3300025.. (original name was: 3300025105.a:Ga0209479_1003783); c00055_3300025.. (original name was: 3300025105.a:Ga0209479_1001843); c00056_3300025.. (original name was: 3300025105.a:Ga0209479_1005978); c00057_3300025.. (original name was: 3300025105.a:Ga0209479_1005381); c00058_3300025.. (original name was: 3300025105.a:Ga0209479_1001404); c00059_3300025.. (original name was: 3300025105.a:Ga0209479_1003172); c00060_3300025.. (original name was: 3300025105.a:Ga0209479_1002036); c00061_3300025.. (original name was: 3300025105.a:Ga0209479_1001439); c00062_3300025.. (original name was: 3300025105.a:Ga0209479_1002010); c00063_3300025.. (original name was: 3300025105.a:Ga0209479_1001612); c00064_3300025.. (original name was: 3300025105.a:Ga0209479_1003602); c00065_3300025.. (original name was: 3300025105.a:Ga0209479_1000692); c00066_3300025.. (original name was: 3300025105.a:Ga0209479_1001750); c00067_3300025.. (original name was: 3300025105.a:Ga0209479_1001394); c00068_3300025.. (original name was: 3300025105.a:Ga0209479_1003981); c00070_3300025.. (original name was: 3300025105.a:Ga0209479_1001554); c00071_3300025.. (original name was: 3300025105.a:Ga0209479_1001721); c00072_3300025.. (original name was: 3300025105.a:Ga0209479_1001522); c00073_3300025.. (original name was: 3300025105.a:Ga0209479_1002007); c00074_3300025.. (original name was: 3300025105.a:Ga0209479_1000552); c00075_3300025.. (original name was: 3300025105.a:Ga0209479_1004170); c00076_3300025.. (original name was: 3300025105.a:Ga0209479_1001185); c00077_3300025.. (original name was: 3300025105.a:Ga0209479_1004945); c00078_3300025.. (original name was: 3300025105.a:Ga0209479_1000483); c00079_3300025.. (original name was: 3300025105.a:Ga0209479_1009630); c00080_3300025.. (original name was: 3300025105.a:Ga0209479_1003969); c00082_3300025.. (original name was: 3300025105.a:Ga0209479_1006191); c00083_3300025.. (original name was: 3300025105.a:Ga0209479_1002609); c00084_3300025.. (original name was: 3300025105.a:Ga0209479_1002219); c00085_3300025.. (original name was: 3300025105.a:Ga0209479_1003699); c00086_3300025.. (original name was: 3300025105.a:Ga0209479_1002704); c00087_3300025.. (original name was: 3300025105.a:Ga0209479_1003531); c00088_3300025.. (original name was: 3300025105.a:Ga0209479_1000341); c00089_3300025.. (original name was: 3300025105.a:Ga0209479_1000540); c00090_3300025.. (original name was: 3300025105.a:Ga0209479_1001734); c00091_3300025.. (original name was: 3300025105.a:Ga0209479_1001933); c00092_3300025.. (original name was: 3300025105.a:Ga0209479_1000441); c00093_3300025.. (original name was: 3300025105.a:Ga0209479_1003227); c00094_3300025.. (original name was: 3300025105.a:Ga0209479_1002637); c00095_3300025.. (original name was: 3300025105.a:Ga0209479_1000249); c00096_3300025.. (original name was: 3300025105.a:Ga0209479_1007271); c00097_3300025.. (original name was: 3300025105.a:Ga0209479_1001898); c00098_3300025.. (original name was: 3300025105.a:Ga0209479_1001938); c00099_3300025.. (original name was: 3300025105.a:Ga0209479_1001142); c00100_3300025.. (original name was: 3300025105.a:Ga0209479_1000373); c00101_3300025.. (original name was: 3300025105.a:Ga0209479_1000771); c00102_3300025.. (original name was: 3300025105.a:Ga0209479_1002761); c00103_3300025.. (original name was: 3300025105.a:Ga0209479_1001169); c00104_3300025.. (original name was: 3300025105.a:Ga0209479_1002139); c00105_3300025.. (original name was: 3300025105.a:Ga0209479_1001751); c00106_3300025.. (original name was: 3300025105.a:Ga0209479_1008348); c00107_3300025.. (original name was: 3300025105.a:Ga0209479_1006159); c00108_3300025.. (original name was: 3300025105.a:Ga0209479_1000587); c00109_3300025.. (original name was: 3300025105.a:Ga0209479_1005562); c00110_3300025.. (original name was: 3300025105.a:Ga0209479_1009465); c00111_3300025.. (original name was: 3300025105.a:Ga0209479_1000461); c00112_3300025.. (original name was: 3300025105.a:Ga0209479_1000660); c00113_3300025.. (original name was: 3300025105.a:Ga0209479_1002650); c00114_3300025.. (original name was: 3300025105.a:Ga0209479_1002058); c00115_3300025.. (original name was: 3300025105.a:Ga0209479_1000466); c00116_3300025.. (original name was: 3300025105.a:Ga0209479_1002456); c00117_3300025.. (original name was: 3300025105.a:Ga0209479_1001305); c00118_3300025.. (original name was: 3300025105.a:Ga0209479_1001984); c00119_3300025.. (original name was: 3300025105.a:Ga0209479_1001037); c00121_3300025.. (original name was: 3300025105.a:Ga0209479_1001435); c00122_3300025.. (original name was: 3300025105.a:Ga0209479_1001057); c00123_3300025.. (original name was: 3300025105.a:Ga0209479_1000659); c00124_3300025.. (original name was: 3300025105.a:Ga0209479_1002099); c00125_3300025.. (original name was: 3300025105.a:Ga0209479_1002663); c00126_3300025.. (original name was: 3300025105.a:Ga0209479_1001270); c00128_3300025.. (original name was: 3300025105.a:Ga0209479_1001232); c00129_3300025.. (original name was: 3300025105.a:Ga0209479_1000635); c00131_3300025.. (original name was: 3300025105.a:Ga0209479_1001637); c00132_3300025.. (original name was: 3300025105.a:Ga0209479_1001040); c00133_3300025.. (original name was: 3300025105.a:Ga0209479_1004542); c00134_3300025.. (original name was: 3300025105.a:Ga0209479_1001955); c00135_3300025.. (original name was: 3300025105.a:Ga0209479_1002154); c00136_3300025.. (original name was: 3300025105.a:Ga0209479_1000761); c00137_3300025.. (original name was: 3300025105.a:Ga0209479_1001737); c00138_3300025.. (original name was: 3300025105.a:Ga0209479_1001538); c00139_3300025.. (original name was: 3300025105.a:Ga0209479_1002169); c00140_3300025.. (original name was: 3300025105.a:Ga0209479_1001572); c00141_3300025.. (original name was: 3300025105.a:Ga0209479_1005552); c00142_3300025.. (original name was: 3300025105.a:Ga0209479_1000411); c00143_3300025.. (original name was: 3300025105.a:Ga0209479_1000889); c00145_3300025.. (original name was: 3300025105.a:Ga0209479_1003482); c00146_3300025.. (original name was: 3300025105.a:Ga0209479_1001691); c00147_3300025.. (original name was: 3300025105.a:Ga0209479_1000578); c00148_3300025.. (original name was: 3300025105.a:Ga0209479_1002110); c00149_3300025.. (original name was: 3300025105.a:Ga0209479_1002309); c00150_3300025.. (original name was: 3300025105.a:Ga0209479_1001491); c00151_3300025.. (original name was: 3300025105.a:Ga0209479_1001507); c00152_3300025.. (original name was: 3300025105.a:Ga0209479_1001733); c00153_3300025.. (original name was: 3300025105.a:Ga0209479_1001098); c00154_3300025.. (original name was: 3300025105.a:Ga0209479_1007068); c00155_3300025.. (original name was: 3300025105.a:Ga0209479_1000830); c00156_3300025.. (original name was: 3300025105.a:Ga0209479_1001696); c00158_3300025.. (original name was: 3300025105.a:Ga0209479_1004111); c00159_3300025.. (original name was: 3300025105.a:Ga0209479_1001783); c00160_3300025.. (original name was: 3300025105.a:Ga0209479_1000318); c00161_3300025.. (original name was: 3300025105.a:Ga0209479_1000716); c00162_3300025.. (original name was: 3300025105.a:Ga0209479_1001512)

Compact view

c00024_3300025.. - Region 1 - T3PKS

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Location: 1 - 21,247 nt. (total: 21,247 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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c00025_3300025.. - Region 1 - NRPS,T1PKS

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Location: 5,580 - 43,267 nt. (total: 37,688 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 5579 - 43267:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (gly) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 10189 - 43267:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys) + (gly) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg25_25

PKS_AT (526..821): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 170.1
inactive: 106.2
Methoxymalonyl-CoA: 84.9
Methylmalonyl-CoA: 72.1
Propionyl-CoA: 54.9
Isobutyryl-CoA: 43.5
Ethylmalonyl-CoA: 36.5
2-Methylbutyryl-CoA: 32.6
CHC-CoA: 29.5
3-Methylbutyryl-CoA: 24.4
trans-1,2-CPDA: 22.8
Benzoyl-CoA: 20.0
Acetyl-CoA: 20.0
fatty_acid: 19.7

ATSignature: Malonyl-CoA, inactive

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 91.7%; Propionyl-CoA: 54.2%

ctg25_26

Search NORINE for peptide: strict or relaxed

AMP-binding (785..1177): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGMIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

ctg25_28

Search NORINE for peptide: strict or relaxed

AMP-binding (255..657): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DMyNiGLIhK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 70% (weak)

c00035_3300025.. - Region 1 - bacteriocin

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Location: 44,455 - 52,824 nt. (total: 8,370 nt) Show pHMM detection rules used

Region on contig edge.

bacteriocin: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03603 or TIGR03604 or TIGR03651 or TIGR03678 or TIGR03693 or TIGR03798 or TIGR03601 or TIGR03602 or TIGR03795 or TIGR03793 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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c00069_3300025.. - Region 1 - T1PKS,hglE-KS

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Location: 1 - 28,981 nt. (total: 28,981 nt) Show pHMM detection rules used

Region on contig edge.

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
hglE-KS: (hglE or hglD)

Legend:

core biosynthetic genes

additional biosynthetic genes

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 28981:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (mal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg69_11

PKS_AT (582..885): mxmal

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 33.4
Methylmalonyl-CoA: 20.6
Malonyl-CoA: 20.4
Isobutyryl-CoA: 16.9
Propionyl-CoA: 15.3
Acetyl-CoA: 12.3
3-Methylbutyryl-CoA: 9.1
fatty_acid: 5.8
CHC-CoA: 2.4
Ethylmalonyl-CoA: 0.9
trans-1,2-CPDA: 0.0
inactive: 0.0
Benzoyl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ATSignature: (unknown)

No matches above 50%

ctg69_12

PKS_AT (1254..1549): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 72.4
Methoxymalonyl-CoA: 33.2
Methylmalonyl-CoA: 30.8
inactive: 30.6
CHC-CoA: 16.9
Propionyl-CoA: 16.4
Ethylmalonyl-CoA: 12.6
fatty_acid: 11.7
trans-1,2-CPDA: 10.3
Isobutyryl-CoA: 1.8
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 70.8%; inactive: 62.5%

c00081_3300025.. - Region 1 - terpene

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Location: 1 - 3,706 nt. (total: 3,706 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

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c00120_3300025.. - Region 1 - terpene

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Location: 649 - 12,039 nt. (total: 11,391 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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Gene details

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c00127_3300025.. - Region 1 - acyl_amino_acids

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Location: 1 - 33,528 nt. (total: 33,528 nt) Show pHMM detection rules used

Region on contig edge.

acyl_amino_acids: NasY

Legend:

core biosynthetic genes

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c00130_3300025.. - Region 1 - phosphonate

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Location: 1 - 11,046 nt. (total: 11,046 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: phosphonates

Legend:

core biosynthetic genes

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c00144_3300025.. - Region 1 - ladderane

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Location: 1 - 24,335 nt. (total: 24,335 nt) Show pHMM detection rules used

Region on contig edge.

ladderane: ladderane

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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c00157_3300025.. - Region 1 - terpene

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Location: 1 - 3,136 nt. (total: 3,136 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

TTA codons

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