3300025347_2 - 9 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00015_3300025.. (original name was: 3300025347.a:Ga0208979_100220)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	bacteriocin	64,890	72,860

c00030_3300025.. (original name was: 3300025347.a:Ga0208979_100102)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	terpene	1	19,799

c00054_3300025.. (original name was: 3300025347.a:Ga0208979_100221)

Region	Type	From	To	Most similar known cluster		Similarity
Region 54.1	T1PKS	2,470	56,313

c00066_3300025.. (original name was: 3300025347.a:Ga0208979_100046)

Region	Type	From	To	Most similar known cluster		Similarity
Region 66.1	terpene	177,724	198,956

c00080_3300025.. (original name was: 3300025347.a:Ga0208979_100050)

Region	Type	From	To	Most similar known cluster		Similarity
Region 80.1	NRPS-like	59,179	101,956
Region 80.2	T1PKS	129,351	177,693

c00089_3300025.. (original name was: 3300025347.a:Ga0208979_100477)

Region	Type	From	To	Most similar known cluster		Similarity
Region 89.1	bacteriocin	1	9,647

c00092_3300025.. (original name was: 3300025347.a:Ga0208979_100052)

Region	Type	From	To	Most similar known cluster		Similarity
Region 92.1	NRPS,T1PKS,NRPS-like	106,737	217,396

c00104_3300025.. (original name was: 3300025347.a:Ga0208979_100757)

Region	Type	From	To	Most similar known cluster		Similarity
Region 104.1	NRPS-like	1	10,979

Region	Type	From	To	Similarity
Region 15.1	bacteriocin	64,890	72,860
Region 30.1	terpene	1	19,799
Region 54.1	T1PKS	2,470	56,313
Region 66.1	terpene	177,724	198,956
Region 80.1	NRPS-like	59,179	101,956
Region 80.2	T1PKS	129,351	177,693
Region 89.1	bacteriocin	1	9,647
Region 92.1	NRPS,T1PKS,NRPS-like	106,737	217,396
Region 104.1	NRPS-like	1	10,979

No secondary metabolite regions were found in these records:: c00001_3300025.. (original name was: 3300025347.a:Ga0208979_101412); c00002_3300025.. (original name was: 3300025347.a:Ga0208979_102331); c00003_3300025.. (original name was: 3300025347.a:Ga0208979_102240); c00004_3300025.. (original name was: 3300025347.a:Ga0208979_101941); c00005_3300025.. (original name was: 3300025347.a:Ga0208979_101852); c00006_3300025.. (original name was: 3300025347.a:Ga0208979_101400); c00007_3300025.. (original name was: 3300025347.a:Ga0208979_100864); c00008_3300025.. (original name was: 3300025347.a:Ga0208979_100635); c00009_3300025.. (original name was: 3300025347.a:Ga0208979_101753); c00010_3300025.. (original name was: 3300025347.a:Ga0208979_102073); c00011_3300025.. (original name was: 3300025347.a:Ga0208979_101277); c00012_3300025.. (original name was: 3300025347.a:Ga0208979_100561); c00013_3300025.. (original name was: 3300025347.a:Ga0208979_100412); c00014_3300025.. (original name was: 3300025347.a:Ga0208979_101549); c00016_3300025.. (original name was: 3300025347.a:Ga0208979_100797); c00017_3300025.. (original name was: 3300025347.a:Ga0208979_101991); c00018_3300025.. (original name was: 3300025347.a:Ga0208979_100996); c00019_3300025.. (original name was: 3300025347.a:Ga0208979_100130); c00020_3300025.. (original name was: 3300025347.a:Ga0208979_100335); c00021_3300025.. (original name was: 3300025347.a:Ga0208979_100529); c00022_3300025.. (original name was: 3300025347.a:Ga0208979_100114); c00023_3300025.. (original name was: 3300025347.a:Ga0208979_101860); c00024_3300025.. (original name was: 3300025347.a:Ga0208979_100501); c00025_3300025.. (original name was: 3300025347.a:Ga0208979_100889); c00026_3300025.. (original name was: 3300025347.a:Ga0208979_102021); c00027_3300025.. (original name was: 3300025347.a:Ga0208979_100031); c00028_3300025.. (original name was: 3300025347.a:Ga0208979_100139); c00029_3300025.. (original name was: 3300025347.a:Ga0208979_101097); c00031_3300025.. (original name was: 3300025347.a:Ga0208979_100694); c00032_3300025.. (original name was: 3300025347.a:Ga0208979_100296); c00033_3300025.. (original name was: 3300025347.a:Ga0208979_101363); c00034_3300025.. (original name was: 3300025347.a:Ga0208979_100883); c00035_3300025.. (original name was: 3300025347.a:Ga0208979_101082); c00036_3300025.. (original name was: 3300025347.a:Ga0208979_100112); c00037_3300025.. (original name was: 3300025347.a:Ga0208979_101567); c00038_3300025.. (original name was: 3300025347.a:Ga0208979_100424); c00039_3300025.. (original name was: 3300025347.a:Ga0208979_100095); c00040_3300025.. (original name was: 3300025347.a:Ga0208979_100692); c00041_3300025.. (original name was: 3300025347.a:Ga0208979_100332); c00042_3300025.. (original name was: 3300025347.a:Ga0208979_100056); c00043_3300025.. (original name was: 3300025347.a:Ga0208979_100153); c00044_3300025.. (original name was: 3300025347.a:Ga0208979_100638); c00045_3300025.. (original name was: 3300025347.a:Ga0208979_100696); c00046_3300025.. (original name was: 3300025347.a:Ga0208979_100298); c00047_3300025.. (original name was: 3300025347.a:Ga0208979_100107); c00048_3300025.. (original name was: 3300025347.a:Ga0208979_100398); c00049_3300025.. (original name was: 3300025347.a:Ga0208979_100012); c00050_3300025.. (original name was: 3300025347.a:Ga0208979_100788); c00051_3300025.. (original name was: 3300025347.a:Ga0208979_100625); c00052_3300025.. (original name was: 3300025347.a:Ga0208979_100158); c00053_3300025.. (original name was: 3300025347.a:Ga0208979_100556); c00055_3300025.. (original name was: 3300025347.a:Ga0208979_100544); c00056_3300025.. (original name was: 3300025347.a:Ga0208979_100719); c00057_3300025.. (original name was: 3300025347.a:Ga0208979_100423); c00058_3300025.. (original name was: 3300025347.a:Ga0208979_100555); c00059_3300025.. (original name was: 3300025347.a:Ga0208979_100518); c00060_3300025.. (original name was: 3300025347.a:Ga0208979_100120); c00061_3300025.. (original name was: 3300025347.a:Ga0208979_100702); c00062_3300025.. (original name was: 3300025347.a:Ga0208979_100322); c00063_3300025.. (original name was: 3300025347.a:Ga0208979_102312); c00064_3300025.. (original name was: 3300025347.a:Ga0208979_100919); c00065_3300025.. (original name was: 3300025347.a:Ga0208979_101404); c00067_3300025.. (original name was: 3300025347.a:Ga0208979_101501); c00068_3300025.. (original name was: 3300025347.a:Ga0208979_100663); c00069_3300025.. (original name was: 3300025347.a:Ga0208979_100464); c00070_3300025.. (original name was: 3300025347.a:Ga0208979_100391); c00071_3300025.. (original name was: 3300025347.a:Ga0208979_100018); c00072_3300025.. (original name was: 3300025347.a:Ga0208979_100187); c00073_3300025.. (original name was: 3300025347.a:Ga0208979_101409); c00074_3300025.. (original name was: 3300025347.a:Ga0208979_100434); c00075_3300025.. (original name was: 3300025347.a:Ga0208979_100633); c00076_3300025.. (original name was: 3300025347.a:Ga0208979_100453); c00077_3300025.. (original name was: 3300025347.a:Ga0208979_100055); c00078_3300025.. (original name was: 3300025347.a:Ga0208979_100813); c00079_3300025.. (original name was: 3300025347.a:Ga0208979_100216); c00081_3300025.. (original name was: 3300025347.a:Ga0208979_100816); c00082_3300025.. (original name was: 3300025347.a:Ga0208979_102010); c00083_3300025.. (original name was: 3300025347.a:Ga0208979_101214); c00084_3300025.. (original name was: 3300025347.a:Ga0208979_101025); c00085_3300025.. (original name was: 3300025347.a:Ga0208979_100826); c00086_3300025.. (original name was: 3300025347.a:Ga0208979_100344); c00087_3300025.. (original name was: 3300025347.a:Ga0208979_100145); c00088_3300025.. (original name was: 3300025347.a:Ga0208979_101870); c00090_3300025.. (original name was: 3300025347.a:Ga0208979_100080); c00091_3300025.. (original name was: 3300025347.a:Ga0208979_100578); c00093_3300025.. (original name was: 3300025347.a:Ga0208979_100770); c00094_3300025.. (original name was: 3300025347.a:Ga0208979_100571); c00095_3300025.. (original name was: 3300025347.a:Ga0208979_100526); c00096_3300025.. (original name was: 3300025347.a:Ga0208979_102317); c00097_3300025.. (original name was: 3300025347.a:Ga0208979_100539); c00098_3300025.. (original name was: 3300025347.a:Ga0208979_100738); c00099_3300025.. (original name was: 3300025347.a:Ga0208979_100340); c00100_3300025.. (original name was: 3300025347.a:Ga0208979_100795); c00101_3300025.. (original name was: 3300025347.a:Ga0208979_100198); c00102_3300025.. (original name was: 3300025347.a:Ga0208979_100397); c00103_3300025.. (original name was: 3300025347.a:Ga0208979_100456); c00105_3300025.. (original name was: 3300025347.a:Ga0208979_100359); c00106_3300025.. (original name was: 3300025347.a:Ga0208979_100746); c00107_3300025.. (original name was: 3300025347.a:Ga0208979_100764); c00108_3300025.. (original name was: 3300025347.a:Ga0208979_100577); c00109_3300025.. (original name was: 3300025347.a:Ga0208979_100776); c00110_3300025.. (original name was: 3300025347.a:Ga0208979_100841); c00111_3300025.. (original name was: 3300025347.a:Ga0208979_100858); c00112_3300025.. (original name was: 3300025347.a:Ga0208979_101261); c00113_3300025.. (original name was: 3300025347.a:Ga0208979_100664); c00114_3300025.. (original name was: 3300025347.a:Ga0208979_100354); c00115_3300025.. (original name was: 3300025347.a:Ga0208979_100752); c00116_3300025.. (original name was: 3300025347.a:Ga0208979_101150); c00117_3300025.. (original name was: 3300025347.a:Ga0208979_101474); c00118_3300025.. (original name was: 3300025347.a:Ga0208979_101727); c00119_3300025.. (original name was: 3300025347.a:Ga0208979_100054); c00120_3300025.. (original name was: 3300025347.a:Ga0208979_101447); c00121_3300025.. (original name was: 3300025347.a:Ga0208979_100651); c00122_3300025.. (original name was: 3300025347.a:Ga0208979_101845); c00123_3300025.. (original name was: 3300025347.a:Ga0208979_101909); c00124_3300025.. (original name was: 3300025347.a:Ga0208979_101204); c00125_3300025.. (original name was: 3300025347.a:Ga0208979_102000); c00126_3300025.. (original name was: 3300025347.a:Ga0208979_102237)

Compact view

c00054_3300025.. - Region 1 - T1PKS

Download region GenBank file

Location: 2,470 - 56,313 nt. (total: 53,844 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 2469 - 56313:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (pk)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg54_15

PKS_AT (567..864): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; CE-Malonyl-CoA: 62.5%; Ethylmalonyl-CoA: 62.5%

minowa: Methylmalonyl-CoA

Prediction, score:

Methylmalonyl-CoA: 101.2
Methoxymalonyl-CoA: 97.6
Malonyl-CoA: 96.2
Isobutyryl-CoA: 88.7
Ethylmalonyl-CoA: 68.9
Propionyl-CoA: 59.9
2-Methylbutyryl-CoA: 50.3
trans-1,2-CPDA: 44.6
fatty_acid: 43.8
3-Methylbutyryl-CoA: 39.3
Acetyl-CoA: 37.7
Benzoyl-CoA: 32.2
inactive: 25.4
CHC-CoA: 20.3

ctg54_20

PKS_AT (606..904): pk

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 62.5%

minowa: Methoxymalonyl-CoA

Prediction, score:

Methoxymalonyl-CoA: 24.3
Malonyl-CoA: 23.0
Methylmalonyl-CoA: 20.1
Ethylmalonyl-CoA: 18.8
Propionyl-CoA: 10.1
CHC-CoA: 9.6
trans-1,2-CPDA: 0.0
inactive: 0.0
fatty_acid: 0.0
Isobutyryl-CoA: 0.0
Benzoyl-CoA: 0.0
Acetyl-CoA: 0.0
3-Methylbutyryl-CoA: 0.0
2-Methylbutyryl-CoA: 0.0

ctg54_26

CAL_domain (164..499): pk

minowa: NH2

Prediction, score:

NH2: 138.6
Acetyl-CoA: 27.2
fatty_acid: 21.6
AHBA: 15.5
shikimic_acid: 0.0

c00080_3300025.. - Region 1 - NRPS-like

Download region GenBank file

Location: 59,179 - 101,956 nt. (total: 42,778 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 59178 - 101956:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg80_66

Search NORINE for peptide: strict or relaxed

AMP-binding (35..441): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfSqLGAviK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 60% (weak)

c00080_3300025.. - Region 2 - T1PKS

Download region GenBank file

Location: 129,351 - 177,693 nt. (total: 48,343 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00092_3300025.. - Region 1 - NRPS,NRPS-like,T1PKS

Download region GenBank file

Location: 106,737 - 217,396 nt. (total: 110,660 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))
NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 106736 - 217396:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (ohmal) + (D-asn) + (gly - D-val) + (gly) + (ohmal) + (ala - cys) + (gly - D-ala) + (ser) + (X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 2, location 106736 - 213062:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (ohmal) + (D-asn) + (gly - D-val) + (gly) + (ohmal) + (ala - cys) + (gly - D-ala) + (ser) + (X)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 173064 - 217396:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (ohmal)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg92_99

Search NORINE for peptide: strict or relaxed

AMP-binding (564..991): X

NRPSPredictor2: tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DApTLGAvnK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 70% (weak)

ctg92_100

Search NORINE for peptide: strict or relaxed

AMP-binding (514..912): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHISLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

ctg92_101

Search NORINE for peptide: strict or relaxed

AMP-binding (506..921): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

AMP-binding (1622..2034): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNaALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 90% (moderate)

ctg92_102

Search NORINE for peptide: strict or relaxed

AMP-binding (518..972): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

AMP-binding (1672..2095): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: cys
Small clusters prediction:: cys
Single AA prediction:: cys

Stachelhaus prediction details:

Stachelhaus sequence:: DLYNMSlIWK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 90% (moderate)

ctg92_103

PKS_AT (575..867): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 83.3%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 179.4
inactive: 129.9
Methoxymalonyl-CoA: 79.9
Methylmalonyl-CoA: 71.0
Propionyl-CoA: 43.3
Isobutyryl-CoA: 38.9
Ethylmalonyl-CoA: 34.9
2-Methylbutyryl-CoA: 24.0
Benzoyl-CoA: 21.2
CHC-CoA: 17.3
fatty_acid: 16.4
Acetyl-CoA: 15.4
3-Methylbutyryl-CoA: 11.6
trans-1,2-CPDA: 10.6

ctg92_104

Search NORINE for peptide: strict or relaxed

AMP-binding (529..939): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

ctg92_105

Search NORINE for peptide: strict or relaxed

AMP-binding (497..925): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGLIWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 100% (strong)

AMP-binding (1595..2035): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAFWlGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

ctg92_106

Search NORINE for peptide: strict or relaxed

AMP-binding (582..1032): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

ctg92_108

PKS_AT (604..897): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 79.2%; Propionyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 157.1
inactive: 106.7
Methoxymalonyl-CoA: 52.9
Methylmalonyl-CoA: 36.9
Propionyl-CoA: 29.0
2-Methylbutyryl-CoA: 18.4
Ethylmalonyl-CoA: 16.0
CHC-CoA: 14.9
Benzoyl-CoA: 13.0
Isobutyryl-CoA: 12.7
Acetyl-CoA: 10.3
fatty_acid: 9.4
trans-1,2-CPDA: 0.0
3-Methylbutyryl-CoA: 0.0

ctg92_110

PKS_AT (584..895): mal

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 87.5%; inactive: 79.2%; Methylmalonyl-CoA: 54.2%

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 150.8
inactive: 119.5
Methylmalonyl-CoA: 69.1
Methoxymalonyl-CoA: 67.1
Propionyl-CoA: 50.4
Ethylmalonyl-CoA: 29.8
Isobutyryl-CoA: 29.2
2-Methylbutyryl-CoA: 27.8
trans-1,2-CPDA: 20.0
Benzoyl-CoA: 17.5
CHC-CoA: 17.3
fatty_acid: 16.1
Acetyl-CoA: 10.9
3-Methylbutyryl-CoA: 0.0

ctg92_111

CAL_domain (126..590): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 14.5
NH2: 4.1
AHBA: 3.2
shikimic_acid: 0.0
Acetyl-CoA: -2.7

c00104_3300025.. - Region 1 - NRPS-like

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Location: 1 - 10,979 nt. (total: 10,979 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 10979:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg104_5

Search NORINE for peptide: strict or relaxed

AMP-binding (63..504): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DiEdVGTvsK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 60% (weak)