3300025677_44 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00015_3300025.. (original name was: 3300025677.a:Ga0209719_1000161)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	NRPS	1	31,461

c00017_3300025.. (original name was: 3300025677.a:Ga0209719_1001897)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	terpene	1	10,339

c00026_3300025.. (original name was: 3300025677.a:Ga0209719_1000244)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	arylpolyene,NRPS	28,454	83,722

Region	Type	From	To	Similarity
Region 15.1	NRPS	1	31,461
Region 17.1	terpene	1	10,339
Region 26.1	arylpolyene,NRPS	28,454	83,722

No secondary metabolite regions were found in these records:: c00001_3300025.. (original name was: 3300025677.a:Ga0209719_1002330); c00002_3300025.. (original name was: 3300025677.a:Ga0209719_1018491); c00003_3300025.. (original name was: 3300025677.a:Ga0209719_1018185); c00004_3300025.. (original name was: 3300025677.a:Ga0209719_1017017); c00005_3300025.. (original name was: 3300025677.a:Ga0209719_1011391); c00006_3300025.. (original name was: 3300025677.a:Ga0209719_1009621); c00007_3300025.. (original name was: 3300025677.a:Ga0209719_1009178); c00008_3300025.. (original name was: 3300025677.a:Ga0209719_1006243); c00009_3300025.. (original name was: 3300025677.a:Ga0209719_1003501); c00010_3300025.. (original name was: 3300025677.a:Ga0209719_1000603); c00011_3300025.. (original name was: 3300025677.a:Ga0209719_1004054); c00012_3300025.. (original name was: 3300025677.a:Ga0209719_1000637); c00013_3300025.. (original name was: 3300025677.a:Ga0209719_1000490); c00014_3300025.. (original name was: 3300025677.a:Ga0209719_1012266); c00016_3300025.. (original name was: 3300025677.a:Ga0209719_1000286); c00018_3300025.. (original name was: 3300025677.a:Ga0209719_1001315); c00019_3300025.. (original name was: 3300025677.a:Ga0209719_1003643); c00020_3300025.. (original name was: 3300025677.a:Ga0209719_1011484); c00021_3300025.. (original name was: 3300025677.a:Ga0209719_1000426); c00022_3300025.. (original name was: 3300025677.a:Ga0209719_1002664); c00023_3300025.. (original name was: 3300025677.a:Ga0209719_1002036); c00024_3300025.. (original name was: 3300025677.a:Ga0209719_1001164); c00025_3300025.. (original name was: 3300025677.a:Ga0209719_1000729); c00027_3300025.. (original name was: 3300025677.a:Ga0209719_1000657); c00028_3300025.. (original name was: 3300025677.a:Ga0209719_1000851); c00029_3300025.. (original name was: 3300025677.a:Ga0209719_1001086); c00030_3300025.. (original name was: 3300025677.a:Ga0209719_1000225); c00031_3300025.. (original name was: 3300025677.a:Ga0209719_1001638); c00032_3300025.. (original name was: 3300025677.a:Ga0209719_1001444); c00033_3300025.. (original name was: 3300025677.a:Ga0209719_1001679); c00034_3300025.. (original name was: 3300025677.a:Ga0209719_1004929); c00035_3300025.. (original name was: 3300025677.a:Ga0209719_1002054); c00036_3300025.. (original name was: 3300025677.a:Ga0209719_1005852); c00037_3300025.. (original name was: 3300025677.a:Ga0209719_1000226); c00038_3300025.. (original name was: 3300025677.a:Ga0209719_1002247); c00039_3300025.. (original name was: 3300025677.a:Ga0209719_1005976); c00040_3300025.. (original name was: 3300025677.a:Ga0209719_1004853); c00041_3300025.. (original name was: 3300025677.a:Ga0209719_1001652); c00042_3300025.. (original name was: 3300025677.a:Ga0209719_1000275); c00043_3300025.. (original name was: 3300025677.a:Ga0209719_1003767); c00044_3300025.. (original name was: 3300025677.a:Ga0209719_1000422); c00045_3300025.. (original name was: 3300025677.a:Ga0209719_1001101); c00046_3300025.. (original name was: 3300025677.a:Ga0209719_1005369); c00047_3300025.. (original name was: 3300025677.a:Ga0209719_1004335); c00048_3300025.. (original name was: 3300025677.a:Ga0209719_1000428); c00049_3300025.. (original name was: 3300025677.a:Ga0209719_1001980); c00050_3300025.. (original name was: 3300025677.a:Ga0209719_1001010); c00051_3300025.. (original name was: 3300025677.a:Ga0209719_1001428); c00052_3300025.. (original name was: 3300025677.a:Ga0209719_1007442); c00053_3300025.. (original name was: 3300025677.a:Ga0209719_1005170); c00054_3300025.. (original name was: 3300025677.a:Ga0209719_1004039); c00055_3300025.. (original name was: 3300025677.a:Ga0209719_1010635); c00056_3300025.. (original name was: 3300025677.a:Ga0209719_1011910); c00057_3300025.. (original name was: 3300025677.a:Ga0209719_1003423); c00058_3300025.. (original name was: 3300025677.a:Ga0209719_1001850); c00059_3300025.. (original name was: 3300025677.a:Ga0209719_1001175); c00060_3300025.. (original name was: 3300025677.a:Ga0209719_1001757); c00061_3300025.. (original name was: 3300025677.a:Ga0209719_1005576); c00062_3300025.. (original name was: 3300025677.a:Ga0209719_1001526); c00063_3300025.. (original name was: 3300025677.a:Ga0209719_1001254); c00064_3300025.. (original name was: 3300025677.a:Ga0209719_1000284); c00065_3300025.. (original name was: 3300025677.a:Ga0209719_1003744)

Compact view

c00015_3300025.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 31,461 nt. (total: 31,461 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00017_3300025.. - Region 1 - terpene

Download region GenBank file

Location: 1 - 10,339 nt. (total: 10,339 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00026_3300025.. - Region 1 - NRPS,arylpolyene

Download region GenBank file

Location: 28,454 - 83,722 nt. (total: 55,269 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)
NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 28453 - 83722:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - tyr)

Direct lookup in NORINE database: strict or relaxed

For candidate cluster 3, location 46192 - 83722:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg26_31

Search NORINE for peptide: strict or relaxed

AMP-binding (67..286): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ---kViTLgK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 40% (weak)

ctg26_62

Search NORINE for peptide: strict or relaxed

AMP-binding (445..837): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAhTLgGVCK
Nearest Stachelhaus code:: val, ile, alloile
Stachelhaus code match:: 80% (moderate)

AMP-binding (1465..1857): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DAdSVGgVCK
Nearest Stachelhaus code:: trp
Stachelhaus code match:: 80% (moderate)