3300025921_13 - 9 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00050_3300025.. (original name was: 3300025921.a:Ga0207652_10000943)

Region	Type	From	To	Most similar known cluster		Similarity
Region 50.1	T3PKS	1	21,688

c00109_3300025.. (original name was: 3300025921.a:Ga0207652_10001533)

Region	Type	From	To	Most similar known cluster		Similarity
Region 109.1	NRPS	1	20,383

c00156_3300025.. (original name was: 3300025921.a:Ga0207652_10000479)

Region	Type	From	To	Most similar known cluster		Similarity
Region 156.1	NRPS	1	41,054

c00169_3300025.. (original name was: 3300025921.a:Ga0207652_10000024)

Region	Type	From	To	Most similar known cluster		Similarity
Region 169.1	NRPS-like	84,231	127,446

c00172_3300025.. (original name was: 3300025921.a:Ga0207652_10000066)

Region	Type	From	To	Most similar known cluster		Similarity
Region 172.1	NRPS-like	23,394	67,806

c00187_3300025.. (original name was: 3300025921.a:Ga0207652_10000028)

Region	Type	From	To	Most similar known cluster		Similarity
Region 187.1	oligosaccharide,ladderane	6,924	56,861

c00192_3300025.. (original name was: 3300025921.a:Ga0207652_10000259)

Region	Type	From	To	Most similar known cluster		Similarity
Region 192.1	lassopeptide	39,694	55,289

c00226_3300025.. (original name was: 3300025921.a:Ga0207652_10000170)

Region	Type	From	To	Most similar known cluster		Similarity
Region 226.1	NRPS-like	1	31,304

c00239_3300025.. (original name was: 3300025921.a:Ga0207652_10002921)

Region	Type	From	To	Most similar known cluster		Similarity
Region 239.1	TfuA-related	1	14,302

Region	Type	From	To	Similarity
Region 50.1	T3PKS	1	21,688
Region 109.1	NRPS	1	20,383
Region 156.1	NRPS	1	41,054
Region 169.1	NRPS-like	84,231	127,446
Region 172.1	NRPS-like	23,394	67,806
Region 187.1	oligosaccharide,ladderane	6,924	56,861
Region 192.1	lassopeptide	39,694	55,289
Region 226.1	NRPS-like	1	31,304
Region 239.1	TfuA-related	1	14,302

No secondary metabolite regions were found in these records:: c00001_3300025.. (original name was: 3300025921.a:Ga0207652_10051316); c00002_3300025.. (original name was: 3300025921.a:Ga0207652_10062558); c00003_3300025.. (original name was: 3300025921.a:Ga0207652_10062077); c00004_3300025.. (original name was: 3300025921.a:Ga0207652_10057842); c00005_3300025.. (original name was: 3300025921.a:Ga0207652_10055843); c00006_3300025.. (original name was: 3300025921.a:Ga0207652_10053473); c00007_3300025.. (original name was: 3300025921.a:Ga0207652_10053215); c00008_3300025.. (original name was: 3300025921.a:Ga0207652_10038111); c00009_3300025.. (original name was: 3300025921.a:Ga0207652_10034359); c00010_3300025.. (original name was: 3300025921.a:Ga0207652_10022167); c00011_3300025.. (original name was: 3300025921.a:Ga0207652_10017743); c00012_3300025.. (original name was: 3300025921.a:Ga0207652_10012815); c00013_3300025.. (original name was: 3300025921.a:Ga0207652_10001791); c00014_3300025.. (original name was: 3300025921.a:Ga0207652_10007097); c00015_3300025.. (original name was: 3300025921.a:Ga0207652_10000806); c00016_3300025.. (original name was: 3300025921.a:Ga0207652_10007558); c00017_3300025.. (original name was: 3300025921.a:Ga0207652_10006762); c00018_3300025.. (original name was: 3300025921.a:Ga0207652_10048480); c00019_3300025.. (original name was: 3300025921.a:Ga0207652_10003677); c00020_3300025.. (original name was: 3300025921.a:Ga0207652_10020147); c00021_3300025.. (original name was: 3300025921.a:Ga0207652_10019861); c00022_3300025.. (original name was: 3300025921.a:Ga0207652_10000229); c00023_3300025.. (original name was: 3300025921.a:Ga0207652_10001456); c00024_3300025.. (original name was: 3300025921.a:Ga0207652_10019222); c00025_3300025.. (original name was: 3300025921.a:Ga0207652_10014005); c00026_3300025.. (original name was: 3300025921.a:Ga0207652_10000634); c00027_3300025.. (original name was: 3300025921.a:Ga0207652_10017403); c00028_3300025.. (original name was: 3300025921.a:Ga0207652_10009373); c00029_3300025.. (original name was: 3300025921.a:Ga0207652_10000375); c00030_3300025.. (original name was: 3300025921.a:Ga0207652_10000517); c00031_3300025.. (original name was: 3300025921.a:Ga0207652_10000220); c00032_3300025.. (original name was: 3300025921.a:Ga0207652_10000608); c00033_3300025.. (original name was: 3300025921.a:Ga0207652_10017722); c00034_3300025.. (original name was: 3300025921.a:Ga0207652_10000302); c00035_3300025.. (original name was: 3300025921.a:Ga0207652_10000073); c00036_3300025.. (original name was: 3300025921.a:Ga0207652_10000670); c00037_3300025.. (original name was: 3300025921.a:Ga0207652_10000573); c00038_3300025.. (original name was: 3300025921.a:Ga0207652_10000175); c00039_3300025.. (original name was: 3300025921.a:Ga0207652_10000639); c00040_3300025.. (original name was: 3300025921.a:Ga0207652_10051583); c00041_3300025.. (original name was: 3300025921.a:Ga0207652_10000462); c00042_3300025.. (original name was: 3300025921.a:Ga0207652_10001059); c00043_3300025.. (original name was: 3300025921.a:Ga0207652_10057092); c00044_3300025.. (original name was: 3300025921.a:Ga0207652_10009531); c00045_3300025.. (original name was: 3300025921.a:Ga0207652_10012317); c00046_3300025.. (original name was: 3300025921.a:Ga0207652_10000178); c00047_3300025.. (original name was: 3300025921.a:Ga0207652_10000176); c00048_3300025.. (original name was: 3300025921.a:Ga0207652_10001437); c00049_3300025.. (original name was: 3300025921.a:Ga0207652_10002432); c00051_3300025.. (original name was: 3300025921.a:Ga0207652_10004127); c00052_3300025.. (original name was: 3300025921.a:Ga0207652_10002734); c00053_3300025.. (original name was: 3300025921.a:Ga0207652_10000288); c00054_3300025.. (original name was: 3300025921.a:Ga0207652_10003509); c00055_3300025.. (original name was: 3300025921.a:Ga0207652_10001322); c00056_3300025.. (original name was: 3300025921.a:Ga0207652_10060096); c00057_3300025.. (original name was: 3300025921.a:Ga0207652_10066275); c00058_3300025.. (original name was: 3300025921.a:Ga0207652_10001412); c00059_3300025.. (original name was: 3300025921.a:Ga0207652_10001003); c00060_3300025.. (original name was: 3300025921.a:Ga0207652_10004784); c00061_3300025.. (original name was: 3300025921.a:Ga0207652_10000031); c00062_3300025.. (original name was: 3300025921.a:Ga0207652_10001822); c00063_3300025.. (original name was: 3300025921.a:Ga0207652_10008373); c00064_3300025.. (original name was: 3300025921.a:Ga0207652_10015723); c00065_3300025.. (original name was: 3300025921.a:Ga0207652_10001408); c00066_3300025.. (original name was: 3300025921.a:Ga0207652_10045133); c00067_3300025.. (original name was: 3300025921.a:Ga0207652_10050904); c00068_3300025.. (original name was: 3300025921.a:Ga0207652_10042434); c00069_3300025.. (original name was: 3300025921.a:Ga0207652_10015031); c00070_3300025.. (original name was: 3300025921.a:Ga0207652_10013226); c00071_3300025.. (original name was: 3300025921.a:Ga0207652_10000253); c00072_3300025.. (original name was: 3300025921.a:Ga0207652_10000937); c00073_3300025.. (original name was: 3300025921.a:Ga0207652_10004618); c00074_3300025.. (original name was: 3300025921.a:Ga0207652_10052536); c00075_3300025.. (original name was: 3300025921.a:Ga0207652_10001990); c00076_3300025.. (original name was: 3300025921.a:Ga0207652_10015831); c00077_3300025.. (original name was: 3300025921.a:Ga0207652_10002100); c00078_3300025.. (original name was: 3300025921.a:Ga0207652_10000443); c00079_3300025.. (original name was: 3300025921.a:Ga0207652_10003159); c00080_3300025.. (original name was: 3300025921.a:Ga0207652_10022860); c00081_3300025.. (original name was: 3300025921.a:Ga0207652_10032652); c00082_3300025.. (original name was: 3300025921.a:Ga0207652_10001385); c00083_3300025.. (original name was: 3300025921.a:Ga0207652_10001186); c00084_3300025.. (original name was: 3300025921.a:Ga0207652_10006332); c00085_3300025.. (original name was: 3300025921.a:Ga0207652_10001357); c00086_3300025.. (original name was: 3300025921.a:Ga0207652_10010606); c00087_3300025.. (original name was: 3300025921.a:Ga0207652_10009009); c00088_3300025.. (original name was: 3300025921.a:Ga0207652_10024142); c00089_3300025.. (original name was: 3300025921.a:Ga0207652_10000262); c00090_3300025.. (original name was: 3300025921.a:Ga0207652_10000063); c00091_3300025.. (original name was: 3300025921.a:Ga0207652_10011226); c00092_3300025.. (original name was: 3300025921.a:Ga0207652_10000335); c00093_3300025.. (original name was: 3300025921.a:Ga0207652_10000238); c00094_3300025.. (original name was: 3300025921.a:Ga0207652_10021190); c00095_3300025.. (original name was: 3300025921.a:Ga0207652_10000096); c00096_3300025.. (original name was: 3300025921.a:Ga0207652_10000693); c00097_3300025.. (original name was: 3300025921.a:Ga0207652_10008069); c00098_3300025.. (original name was: 3300025921.a:Ga0207652_10002382); c00099_3300025.. (original name was: 3300025921.a:Ga0207652_10001188); c00100_3300025.. (original name was: 3300025921.a:Ga0207652_10001984); c00101_3300025.. (original name was: 3300025921.a:Ga0207652_10043363); c00102_3300025.. (original name was: 3300025921.a:Ga0207652_10001327); c00103_3300025.. (original name was: 3300025921.a:Ga0207652_10067772); c00104_3300025.. (original name was: 3300025921.a:Ga0207652_10017720); c00105_3300025.. (original name was: 3300025921.a:Ga0207652_10001909); c00106_3300025.. (original name was: 3300025921.a:Ga0207652_10062158); c00107_3300025.. (original name was: 3300025921.a:Ga0207652_10000487); c00108_3300025.. (original name was: 3300025921.a:Ga0207652_10058974); c00110_3300025.. (original name was: 3300025921.a:Ga0207652_10000140); c00111_3300025.. (original name was: 3300025921.a:Ga0207652_10025579); c00112_3300025.. (original name was: 3300025921.a:Ga0207652_10036665); c00113_3300025.. (original name was: 3300025921.a:Ga0207652_10018669); c00114_3300025.. (original name was: 3300025921.a:Ga0207652_10028272); c00115_3300025.. (original name was: 3300025921.a:Ga0207652_10001213); c00116_3300025.. (original name was: 3300025921.a:Ga0207652_10002440); c00117_3300025.. (original name was: 3300025921.a:Ga0207652_10042889); c00118_3300025.. (original name was: 3300025921.a:Ga0207652_10000104); c00119_3300025.. (original name was: 3300025921.a:Ga0207652_10049783); c00120_3300025.. (original name was: 3300025921.a:Ga0207652_10001380); c00121_3300025.. (original name was: 3300025921.a:Ga0207652_10014729); c00122_3300025.. (original name was: 3300025921.a:Ga0207652_10000126); c00123_3300025.. (original name was: 3300025921.a:Ga0207652_10000535); c00124_3300025.. (original name was: 3300025921.a:Ga0207652_10000729); c00125_3300025.. (original name was: 3300025921.a:Ga0207652_10000268); c00126_3300025.. (original name was: 3300025921.a:Ga0207652_10000069); c00127_3300025.. (original name was: 3300025921.a:Ga0207652_10054394); c00128_3300025.. (original name was: 3300025921.a:Ga0207652_10057692); c00129_3300025.. (original name was: 3300025921.a:Ga0207652_10001375); c00130_3300025.. (original name was: 3300025921.a:Ga0207652_10009650); c00131_3300025.. (original name was: 3300025921.a:Ga0207652_10000297); c00132_3300025.. (original name was: 3300025921.a:Ga0207652_10039354); c00133_3300025.. (original name was: 3300025921.a:Ga0207652_10017758); c00134_3300025.. (original name was: 3300025921.a:Ga0207652_10038613); c00135_3300025.. (original name was: 3300025921.a:Ga0207652_10000766); c00136_3300025.. (original name was: 3300025921.a:Ga0207652_10028872); c00137_3300025.. (original name was: 3300025921.a:Ga0207652_10002007); c00138_3300025.. (original name was: 3300025921.a:Ga0207652_10000120); c00139_3300025.. (original name was: 3300025921.a:Ga0207652_10019229); c00140_3300025.. (original name was: 3300025921.a:Ga0207652_10004707); c00141_3300025.. (original name was: 3300025921.a:Ga0207652_10000342); c00142_3300025.. (original name was: 3300025921.a:Ga0207652_10000850); c00143_3300025.. (original name was: 3300025921.a:Ga0207652_10000032); c00144_3300025.. (original name was: 3300025921.a:Ga0207652_10000216); c00145_3300025.. (original name was: 3300025921.a:Ga0207652_10029255); c00146_3300025.. (original name was: 3300025921.a:Ga0207652_10000122); c00147_3300025.. (original name was: 3300025921.a:Ga0207652_10000839); c00148_3300025.. (original name was: 3300025921.a:Ga0207652_10000392); c00149_3300025.. (original name was: 3300025921.a:Ga0207652_10004073); c00150_3300025.. (original name was: 3300025921.a:Ga0207652_10057530); c00151_3300025.. (original name was: 3300025921.a:Ga0207652_10001088); c00152_3300025.. (original name was: 3300025921.a:Ga0207652_10050555); c00153_3300025.. (original name was: 3300025921.a:Ga0207652_10001884); c00154_3300025.. (original name was: 3300025921.a:Ga0207652_10001368); c00155_3300025.. (original name was: 3300025921.a:Ga0207652_10027953); c00157_3300025.. (original name was: 3300025921.a:Ga0207652_10001275); c00158_3300025.. (original name was: 3300025921.a:Ga0207652_10000091); c00159_3300025.. (original name was: 3300025921.a:Ga0207652_10002479); c00160_3300025.. (original name was: 3300025921.a:Ga0207652_10017205); c00161_3300025.. (original name was: 3300025921.a:Ga0207652_10000324); c00162_3300025.. (original name was: 3300025921.a:Ga0207652_10006459); c00163_3300025.. (original name was: 3300025921.a:Ga0207652_10000710); c00164_3300025.. (original name was: 3300025921.a:Ga0207652_10000113); c00165_3300025.. (original name was: 3300025921.a:Ga0207652_10004491); c00166_3300025.. (original name was: 3300025921.a:Ga0207652_10029565); c00167_3300025.. (original name was: 3300025921.a:Ga0207652_10000315); c00168_3300025.. (original name was: 3300025921.a:Ga0207652_10001708); c00170_3300025.. (original name was: 3300025921.a:Ga0207652_10005485); c00171_3300025.. (original name was: 3300025921.a:Ga0207652_10002213); c00173_3300025.. (original name was: 3300025921.a:Ga0207652_10004123); c00174_3300025.. (original name was: 3300025921.a:Ga0207652_10001260); c00175_3300025.. (original name was: 3300025921.a:Ga0207652_10000062); c00176_3300025.. (original name was: 3300025921.a:Ga0207652_10000570); c00177_3300025.. (original name was: 3300025921.a:Ga0207652_10001366); c00178_3300025.. (original name was: 3300025921.a:Ga0207652_10000085); c00179_3300025.. (original name was: 3300025921.a:Ga0207652_10000417); c00180_3300025.. (original name was: 3300025921.a:Ga0207652_10002871); c00181_3300025.. (original name was: 3300025921.a:Ga0207652_10008045); c00182_3300025.. (original name was: 3300025921.a:Ga0207652_10000179); c00183_3300025.. (original name was: 3300025921.a:Ga0207652_10034443); c00184_3300025.. (original name was: 3300025921.a:Ga0207652_10000087); c00185_3300025.. (original name was: 3300025921.a:Ga0207652_10000083); c00186_3300025.. (original name was: 3300025921.a:Ga0207652_10000901); c00188_3300025.. (original name was: 3300025921.a:Ga0207652_10000416); c00189_3300025.. (original name was: 3300025921.a:Ga0207652_10000111); c00190_3300025.. (original name was: 3300025921.a:Ga0207652_10000661); c00191_3300025.. (original name was: 3300025921.a:Ga0207652_10000252); c00193_3300025.. (original name was: 3300025921.a:Ga0207652_10000065); c00194_3300025.. (original name was: 3300025921.a:Ga0207652_10001029); c00195_3300025.. (original name was: 3300025921.a:Ga0207652_10000102); c00196_3300025.. (original name was: 3300025921.a:Ga0207652_10000127); c00197_3300025.. (original name was: 3300025921.a:Ga0207652_10024217); c00198_3300025.. (original name was: 3300025921.a:Ga0207652_10002131); c00199_3300025.. (original name was: 3300025921.a:Ga0207652_10000086); c00200_3300025.. (original name was: 3300025921.a:Ga0207652_10000234); c00201_3300025.. (original name was: 3300025921.a:Ga0207652_10000189); c00202_3300025.. (original name was: 3300025921.a:Ga0207652_10000427); c00203_3300025.. (original name was: 3300025921.a:Ga0207652_10000330); c00204_3300025.. (original name was: 3300025921.a:Ga0207652_10049151); c00205_3300025.. (original name was: 3300025921.a:Ga0207652_10000889); c00206_3300025.. (original name was: 3300025921.a:Ga0207652_10000071); c00207_3300025.. (original name was: 3300025921.a:Ga0207652_10035374); c00208_3300025.. (original name was: 3300025921.a:Ga0207652_10000200); c00209_3300025.. (original name was: 3300025921.a:Ga0207652_10002190); c00210_3300025.. (original name was: 3300025921.a:Ga0207652_10003185); c00211_3300025.. (original name was: 3300025921.a:Ga0207652_10000372); c00212_3300025.. (original name was: 3300025921.a:Ga0207652_10000537); c00213_3300025.. (original name was: 3300025921.a:Ga0207652_10038807); c00214_3300025.. (original name was: 3300025921.a:Ga0207652_10000361); c00215_3300025.. (original name was: 3300025921.a:Ga0207652_10014676); c00216_3300025.. (original name was: 3300025921.a:Ga0207652_10002603); c00217_3300025.. (original name was: 3300025921.a:Ga0207652_10000149); c00218_3300025.. (original name was: 3300025921.a:Ga0207652_10000343); c00219_3300025.. (original name was: 3300025921.a:Ga0207652_10037895); c00220_3300025.. (original name was: 3300025921.a:Ga0207652_10035850); c00221_3300025.. (original name was: 3300025921.a:Ga0207652_10000676); c00222_3300025.. (original name was: 3300025921.a:Ga0207652_10000267); c00223_3300025.. (original name was: 3300025921.a:Ga0207652_10007232); c00224_3300025.. (original name was: 3300025921.a:Ga0207652_10003631); c00225_3300025.. (original name was: 3300025921.a:Ga0207652_10026535); c00227_3300025.. (original name was: 3300025921.a:Ga0207652_10000403); c00228_3300025.. (original name was: 3300025921.a:Ga0207652_10000421); c00229_3300025.. (original name was: 3300025921.a:Ga0207652_10012608); c00230_3300025.. (original name was: 3300025921.a:Ga0207652_10003610); c00231_3300025.. (original name was: 3300025921.a:Ga0207652_10001974); c00232_3300025.. (original name was: 3300025921.a:Ga0207652_10004456); c00233_3300025.. (original name was: 3300025921.a:Ga0207652_10002002); c00234_3300025.. (original name was: 3300025921.a:Ga0207652_10000941); c00235_3300025.. (original name was: 3300025921.a:Ga0207652_10037874); c00236_3300025.. (original name was: 3300025921.a:Ga0207652_10011289); c00237_3300025.. (original name was: 3300025921.a:Ga0207652_10001473); c00238_3300025.. (original name was: 3300025921.a:Ga0207652_10001285); c00240_3300025.. (original name was: 3300025921.a:Ga0207652_10009231)

Compact view

c00050_3300025.. - Region 1 - T3PKS

Download region GenBank file

Location: 1 - 21,688 nt. (total: 21,688 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00109_3300025.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 20,383 nt. (total: 20,383 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 20383:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ala) + (pro) + (ala-b) + (val)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg109_10

Search NORINE for peptide: strict or relaxed

AMP-binding (455..854): val

NRPSPredictor2: val

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: val

Stachelhaus prediction details:

Stachelhaus sequence:: DAfWLGGTFK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 90% (moderate)

ctg109_11

Search NORINE for peptide: strict or relaxed

AMP-binding (425..828): ala-b

NRPSPredictor2: ala-b

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: gDWVvSLADK
Nearest Stachelhaus code:: ala-b
Stachelhaus code match:: 80% (moderate)

ctg109_12

Search NORINE for peptide: strict or relaxed

AMP-binding (376..779): pro

NRPSPredictor2: pro

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: pro, pip
Small clusters prediction:: pro
Single AA prediction:: pro

Stachelhaus prediction details:

Stachelhaus sequence:: DVQFIAHVVK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 100% (strong)

ctg109_13

Search NORINE for peptide: strict or relaxed

AMP-binding (514..905): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

c00156_3300025.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 41,054 nt. (total: 41,054 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 41054:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (ala) + (ala) + (X) + (X) + (ala-b) + (D-asp)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg156_14

Search NORINE for peptide: strict or relaxed

AMP-binding (27..417): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

ctg156_15

Search NORINE for peptide: strict or relaxed

AMP-binding (283..673): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

ctg156_16

Search NORINE for peptide: strict or relaxed

AMP-binding (16..415): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: stGtrSSmiK
Nearest Stachelhaus code:: dab
Stachelhaus code match:: 40% (weak)

ctg156_18

Search NORINE for peptide: strict or relaxed

AMP-binding (465..869): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGhVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

ctg156_19

Search NORINE for peptide: strict or relaxed

AMP-binding (508..910): ala-b

NRPSPredictor2: ala-b

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: VDcVvSLADK
Nearest Stachelhaus code:: ala-b
Stachelhaus code match:: 80% (moderate)

ctg156_21

Search NORINE for peptide: strict or relaxed

AMP-binding (460..863): asp

NRPSPredictor2: asp

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKVGHVGK
Nearest Stachelhaus code:: asp
Stachelhaus code match:: 100% (strong)

c00169_3300025.. - Region 1 - NRPS-like

Download region GenBank file

Location: 84,231 - 127,446 nt. (total: 43,216 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 84230 - 127446:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg169_87

Search NORINE for peptide: strict or relaxed

AMP-binding (58..498): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: ayvVVAGgaK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 50% (weak)

c00172_3300025.. - Region 1 - NRPS-like

Download region GenBank file

Location: 23,394 - 67,806 nt. (total: 44,413 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 23393 - 67806:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg172_35

Search NORINE for peptide: strict or relaxed

AMP-binding (562..998): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: eFtviGGpVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 50% (weak)

c00187_3300025.. - Region 1 - ladderane,oligosaccharide

Download region GenBank file

Location: 6,924 - 56,861 nt. (total: 49,938 nt) Show pHMM detection rules used

oligosaccharide: (minimum(3, [DUF1205, Glyco_transf_28, Glycos_transf_1, Glycos_transf_2, MGT]) and minscore(MGT, 150))
ladderane: ladderane

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00192_3300025.. - Region 1 - lassopeptide

Download region GenBank file

Location: 39,694 - 55,289 nt. (total: 15,596 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lasso peptides

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

c00226_3300025.. - Region 1 - NRPS-like

Download region GenBank file

Location: 1 - 31,304 nt. (total: 31,304 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 31304:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg226_5

Search NORINE for peptide: strict or relaxed

AMP-binding (36..432): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vfmvIGGslK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 40% (weak)

c00239_3300025.. - Region 1 - TfuA-related

Download region GenBank file

Location: 1 - 14,302 nt. (total: 14,302 nt) Show pHMM detection rules used

Region on contig edge.

TfuA-related: ((YcaO or TIGR03882) and TfuA)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it