3300026278_4 - 7 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00028_3300026.. (original name was: 3300026278.a:Ga0209018_1000039)

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	lassopeptide	102,642	113,463

c00065_3300026.. (original name was: 3300026278.a:Ga0209018_1000142)

Region	Type	From	To	Most similar known cluster		Similarity
Region 65.1	NRPS	28,162	67,272

c00088_3300026.. (original name was: 3300026278.a:Ga0209018_1000213)

Region	Type	From	To	Most similar known cluster		Similarity
Region 88.1	NRPS	1	45,591

c00118_3300026.. (original name was: 3300026278.a:Ga0209018_1000060)

Region	Type	From	To	Most similar known cluster		Similarity
Region 118.1	NRPS,T1PKS	38,669	90,127

c00119_3300026.. (original name was: 3300026278.a:Ga0209018_1001452)

Region	Type	From	To	Most similar known cluster		Similarity
Region 119.1	terpene	1	15,899

c00136_3300026.. (original name was: 3300026278.a:Ga0209018_1000010)

Region	Type	From	To	Most similar known cluster		Similarity
Region 136.1	T1PKS	59,724	107,286

c00141_3300026.. (original name was: 3300026278.a:Ga0209018_1000102)

Region	Type	From	To	Most similar known cluster		Similarity
Region 141.1	NRPS	21,273	76,976

Region	Type	From	To	Similarity
Region 28.1	lassopeptide	102,642	113,463
Region 65.1	NRPS	28,162	67,272
Region 88.1	NRPS	1	45,591
Region 118.1	NRPS,T1PKS	38,669	90,127
Region 119.1	terpene	1	15,899
Region 136.1	T1PKS	59,724	107,286
Region 141.1	NRPS	21,273	76,976

No secondary metabolite regions were found in these records:: c00001_3300026.. (original name was: 3300026278.a:Ga0209018_1008037); c00002_3300026.. (original name was: 3300026278.a:Ga0209018_1007092); c00003_3300026.. (original name was: 3300026278.a:Ga0209018_1001618); c00004_3300026.. (original name was: 3300026278.a:Ga0209018_1001439); c00005_3300026.. (original name was: 3300026278.a:Ga0209018_1004975); c00006_3300026.. (original name was: 3300026278.a:Ga0209018_1003897); c00007_3300026.. (original name was: 3300026278.a:Ga0209018_1003490); c00008_3300026.. (original name was: 3300026278.a:Ga0209018_1000334); c00009_3300026.. (original name was: 3300026278.a:Ga0209018_1011600); c00010_3300026.. (original name was: 3300026278.a:Ga0209018_1010992); c00011_3300026.. (original name was: 3300026278.a:Ga0209018_1007944); c00012_3300026.. (original name was: 3300026278.a:Ga0209018_1004959); c00013_3300026.. (original name was: 3300026278.a:Ga0209018_1004415); c00014_3300026.. (original name was: 3300026278.a:Ga0209018_1004053); c00015_3300026.. (original name was: 3300026278.a:Ga0209018_1003716); c00016_3300026.. (original name was: 3300026278.a:Ga0209018_1003556); c00017_3300026.. (original name was: 3300026278.a:Ga0209018_1002145); c00018_3300026.. (original name was: 3300026278.a:Ga0209018_1002011); c00019_3300026.. (original name was: 3300026278.a:Ga0209018_1000520); c00020_3300026.. (original name was: 3300026278.a:Ga0209018_1000719); c00021_3300026.. (original name was: 3300026278.a:Ga0209018_1000176); c00022_3300026.. (original name was: 3300026278.a:Ga0209018_1000042); c00023_3300026.. (original name was: 3300026278.a:Ga0209018_1008298); c00024_3300026.. (original name was: 3300026278.a:Ga0209018_1001532); c00025_3300026.. (original name was: 3300026278.a:Ga0209018_1004065); c00026_3300026.. (original name was: 3300026278.a:Ga0209018_1000053); c00027_3300026.. (original name was: 3300026278.a:Ga0209018_1000003); c00029_3300026.. (original name was: 3300026278.a:Ga0209018_1002411); c00030_3300026.. (original name was: 3300026278.a:Ga0209018_1000859); c00031_3300026.. (original name was: 3300026278.a:Ga0209018_1006021); c00032_3300026.. (original name was: 3300026278.a:Ga0209018_1002141); c00033_3300026.. (original name was: 3300026278.a:Ga0209018_1000298); c00034_3300026.. (original name was: 3300026278.a:Ga0209018_1000555); c00035_3300026.. (original name was: 3300026278.a:Ga0209018_1002592); c00036_3300026.. (original name was: 3300026278.a:Ga0209018_1003465); c00037_3300026.. (original name was: 3300026278.a:Ga0209018_1000278); c00038_3300026.. (original name was: 3300026278.a:Ga0209018_1000171); c00039_3300026.. (original name was: 3300026278.a:Ga0209018_1012339); c00040_3300026.. (original name was: 3300026278.a:Ga0209018_1000996); c00041_3300026.. (original name was: 3300026278.a:Ga0209018_1006568); c00042_3300026.. (original name was: 3300026278.a:Ga0209018_1000554); c00043_3300026.. (original name was: 3300026278.a:Ga0209018_1000346); c00044_3300026.. (original name was: 3300026278.a:Ga0209018_1004874); c00045_3300026.. (original name was: 3300026278.a:Ga0209018_1000024); c00046_3300026.. (original name was: 3300026278.a:Ga0209018_1000703); c00047_3300026.. (original name was: 3300026278.a:Ga0209018_1000606); c00048_3300026.. (original name was: 3300026278.a:Ga0209018_1000033); c00049_3300026.. (original name was: 3300026278.a:Ga0209018_1000550); c00050_3300026.. (original name was: 3300026278.a:Ga0209018_1003849); c00051_3300026.. (original name was: 3300026278.a:Ga0209018_1000066); c00052_3300026.. (original name was: 3300026278.a:Ga0209018_1000260); c00053_3300026.. (original name was: 3300026278.a:Ga0209018_1001120); c00054_3300026.. (original name was: 3300026278.a:Ga0209018_1001514); c00055_3300026.. (original name was: 3300026278.a:Ga0209018_1002078); c00056_3300026.. (original name was: 3300026278.a:Ga0209018_1000161); c00057_3300026.. (original name was: 3300026278.a:Ga0209018_1006073); c00058_3300026.. (original name was: 3300026278.a:Ga0209018_1000302); c00059_3300026.. (original name was: 3300026278.a:Ga0209018_1002668); c00060_3300026.. (original name was: 3300026278.a:Ga0209018_1000877); c00061_3300026.. (original name was: 3300026278.a:Ga0209018_1000144); c00062_3300026.. (original name was: 3300026278.a:Ga0209018_1001209); c00063_3300026.. (original name was: 3300026278.a:Ga0209018_1000540); c00064_3300026.. (original name was: 3300026278.a:Ga0209018_1001137); c00066_3300026.. (original name was: 3300026278.a:Ga0209018_1004681); c00067_3300026.. (original name was: 3300026278.a:Ga0209018_1000025); c00068_3300026.. (original name was: 3300026278.a:Ga0209018_1007256); c00069_3300026.. (original name was: 3300026278.a:Ga0209018_1000463); c00070_3300026.. (original name was: 3300026278.a:Ga0209018_1000290); c00071_3300026.. (original name was: 3300026278.a:Ga0209018_1003588); c00072_3300026.. (original name was: 3300026278.a:Ga0209018_1000069); c00073_3300026.. (original name was: 3300026278.a:Ga0209018_1001661); c00074_3300026.. (original name was: 3300026278.a:Ga0209018_1002696); c00075_3300026.. (original name was: 3300026278.a:Ga0209018_1000109); c00076_3300026.. (original name was: 3300026278.a:Ga0209018_1000964); c00077_3300026.. (original name was: 3300026278.a:Ga0209018_1002443); c00078_3300026.. (original name was: 3300026278.a:Ga0209018_1009209); c00079_3300026.. (original name was: 3300026278.a:Ga0209018_1004342); c00080_3300026.. (original name was: 3300026278.a:Ga0209018_1000163); c00081_3300026.. (original name was: 3300026278.a:Ga0209018_1001158); c00082_3300026.. (original name was: 3300026278.a:Ga0209018_1000316); c00083_3300026.. (original name was: 3300026278.a:Ga0209018_1002704); c00084_3300026.. (original name was: 3300026278.a:Ga0209018_1003315); c00085_3300026.. (original name was: 3300026278.a:Ga0209018_1000007); c00086_3300026.. (original name was: 3300026278.a:Ga0209018_1000405); c00087_3300026.. (original name was: 3300026278.a:Ga0209018_1005586); c00089_3300026.. (original name was: 3300026278.a:Ga0209018_1000965); c00090_3300026.. (original name was: 3300026278.a:Ga0209018_1000985); c00091_3300026.. (original name was: 3300026278.a:Ga0209018_1000189); c00092_3300026.. (original name was: 3300026278.a:Ga0209018_1001971); c00093_3300026.. (original name was: 3300026278.a:Ga0209018_1000031); c00094_3300026.. (original name was: 3300026278.a:Ga0209018_1000056); c00095_3300026.. (original name was: 3300026278.a:Ga0209018_1010879); c00096_3300026.. (original name was: 3300026278.a:Ga0209018_1000929); c00097_3300026.. (original name was: 3300026278.a:Ga0209018_1005169); c00098_3300026.. (original name was: 3300026278.a:Ga0209018_1002605); c00099_3300026.. (original name was: 3300026278.a:Ga0209018_1006784); c00100_3300026.. (original name was: 3300026278.a:Ga0209018_1000416); c00101_3300026.. (original name was: 3300026278.a:Ga0209018_1000936); c00102_3300026.. (original name was: 3300026278.a:Ga0209018_1000140); c00103_3300026.. (original name was: 3300026278.a:Ga0209018_1000839); c00104_3300026.. (original name was: 3300026278.a:Ga0209018_1000043); c00105_3300026.. (original name was: 3300026278.a:Ga0209018_1001966); c00106_3300026.. (original name was: 3300026278.a:Ga0209018_1000275); c00107_3300026.. (original name was: 3300026278.a:Ga0209018_1001173); c00108_3300026.. (original name was: 3300026278.a:Ga0209018_1000178); c00109_3300026.. (original name was: 3300026278.a:Ga0209018_1000149); c00110_3300026.. (original name was: 3300026278.a:Ga0209018_1001022); c00111_3300026.. (original name was: 3300026278.a:Ga0209018_1000572); c00112_3300026.. (original name was: 3300026278.a:Ga0209018_1000383); c00113_3300026.. (original name was: 3300026278.a:Ga0209018_1000184); c00114_3300026.. (original name was: 3300026278.a:Ga0209018_1000020); c00115_3300026.. (original name was: 3300026278.a:Ga0209018_1001062); c00116_3300026.. (original name was: 3300026278.a:Ga0209018_1000067); c00117_3300026.. (original name was: 3300026278.a:Ga0209018_1003164); c00120_3300026.. (original name was: 3300026278.a:Ga0209018_1000002); c00121_3300026.. (original name was: 3300026278.a:Ga0209018_1002773); c00122_3300026.. (original name was: 3300026278.a:Ga0209018_1000584); c00123_3300026.. (original name was: 3300026278.a:Ga0209018_1000115); c00124_3300026.. (original name was: 3300026278.a:Ga0209018_1012571); c00125_3300026.. (original name was: 3300026278.a:Ga0209018_1010979); c00126_3300026.. (original name was: 3300026278.a:Ga0209018_1000317); c00127_3300026.. (original name was: 3300026278.a:Ga0209018_1000118); c00128_3300026.. (original name was: 3300026278.a:Ga0209018_1000146); c00129_3300026.. (original name was: 3300026278.a:Ga0209018_1001180); c00130_3300026.. (original name was: 3300026278.a:Ga0209018_1000128); c00131_3300026.. (original name was: 3300026278.a:Ga0209018_1000327); c00132_3300026.. (original name was: 3300026278.a:Ga0209018_1000150); c00133_3300026.. (original name was: 3300026278.a:Ga0209018_1010498); c00134_3300026.. (original name was: 3300026278.a:Ga0209018_1001409); c00135_3300026.. (original name was: 3300026278.a:Ga0209018_1000234); c00137_3300026.. (original name was: 3300026278.a:Ga0209018_1000784); c00138_3300026.. (original name was: 3300026278.a:Ga0209018_1000187); c00139_3300026.. (original name was: 3300026278.a:Ga0209018_1000038); c00140_3300026.. (original name was: 3300026278.a:Ga0209018_1000229)

Compact view

c00028_3300026.. - Region 1 - lassopeptide

Download region GenBank file

Location: 102,642 - 113,463 nt. (total: 10,822 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lasso peptides

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

c00065_3300026.. - Region 1 - NRPS

Download region GenBank file

Location: 28,162 - 67,272 nt. (total: 39,111 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 28161 - 67272:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - phe) + (orn - D-asn) + (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg65_39

Search NORINE for peptide: strict or relaxed

AMP-binding (470..864): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmLIGAVgK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 80% (moderate)

ctg65_40

Search NORINE for peptide: strict or relaxed

AMP-binding (482..888): orn

NRPSPredictor2: orn

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: orn, horn
Single AA prediction:: orn

Stachelhaus prediction details:

Stachelhaus sequence:: DVGEIGtIDK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 90% (moderate)

AMP-binding (1553..1963): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

ctg65_41

Search NORINE for peptide: strict or relaxed

AMP-binding (471..879): X

NRPSPredictor2: hydrophilic

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAehIGAIaK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

AMP-binding (1549..1945): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: DAWTiAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 90% (moderate)

c00088_3300026.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 45,591 nt. (total: 45,591 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 45591:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X) + (X - D-X) + (X - phe) + (X - D-X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg88_1

Search NORINE for peptide: strict or relaxed

AMP-binding (496..897): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAvDLGmVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 80% (moderate)

AMP-binding (1560..1955): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DGAiaGlVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

ctg88_2

Search NORINE for peptide: strict or relaxed

AMP-binding (471..866): X

NRPSPredictor2: tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAavVAGVaK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 70% (weak)

AMP-binding (1531..1924): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: DAWTiAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 90% (moderate)

ctg88_3

Search NORINE for peptide: strict or relaxed

AMP-binding (508..909): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAvDLGmVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 80% (moderate)

AMP-binding (1580..1975): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DGAigGvVVK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

ctg88_4

Search NORINE for peptide: strict or relaxed

AMP-binding (283..692): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAenIGAItK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

c00118_3300026.. - Region 1 - NRPS,T1PKS

Download region GenBank file

Location: 38,669 - 90,127 nt. (total: 51,459 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))
T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 38668 - 90127:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (redmal) + (mal - bht) + (ohmal) + (X) + (ile)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg118_49

CAL_domain (205..531): pk

minowa: NH2

Prediction, score:

NH2: 156.6
Acetyl-CoA: 51.8
fatty_acid: 18.3
AHBA: 12.5
shikimic_acid: 0.0

PKS_AT (1279..1576): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 189.4
inactive: 159.7
Methoxymalonyl-CoA: 58.8
Methylmalonyl-CoA: 51.6
Propionyl-CoA: 43.5
Isobutyryl-CoA: 31.1
Benzoyl-CoA: 25.1
CHC-CoA: 20.2
Acetyl-CoA: 19.5
Ethylmalonyl-CoA: 18.3
trans-1,2-CPDA: 15.3
2-Methylbutyryl-CoA: 15.0
fatty_acid: 9.0
3-Methylbutyryl-CoA: 0.0

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 91.7%; inactive: 87.5%

ctg118_50

Search NORINE for peptide: strict or relaxed

PKS_AT (566..862): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 194.8
inactive: 166.2
Methylmalonyl-CoA: 74.9
Methoxymalonyl-CoA: 73.8
Isobutyryl-CoA: 59.5
Propionyl-CoA: 56.5
Ethylmalonyl-CoA: 40.5
Benzoyl-CoA: 40.0
2-Methylbutyryl-CoA: 35.1
Acetyl-CoA: 21.4
CHC-CoA: 20.5
trans-1,2-CPDA: 15.3
fatty_acid: 12.8
3-Methylbutyryl-CoA: 12.2

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 100.0%; inactive: 95.8%; 2-Rhyd-Malonyl-CoA: 54.2%

AMP-binding (1537..1932): bht

NRPSPredictor2: bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DASiIAGVgK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 80% (moderate)

ctg118_51

PKS_AT (541..839): mal

minowa: Malonyl-CoA

Prediction, score:

Malonyl-CoA: 184.0
inactive: 115.1
Methoxymalonyl-CoA: 78.9
Methylmalonyl-CoA: 66.4
Propionyl-CoA: 44.2
Ethylmalonyl-CoA: 44.1
Isobutyryl-CoA: 34.1
2-Methylbutyryl-CoA: 32.5
CHC-CoA: 28.8
Benzoyl-CoA: 26.6
Acetyl-CoA: 21.8
fatty_acid: 13.9
trans-1,2-CPDA: 13.7
3-Methylbutyryl-CoA: 8.8

ATSignature: Malonyl-CoA

Top 3 matches:: Malonyl-CoA: 95.8%; inactive: 87.5%; 2-Rhyd-Malonyl-CoA: 54.2%

ctg118_52

Search NORINE for peptide: strict or relaxed

AMP-binding (510..919): X

NRPSPredictor2: orn, lys, arg

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAenIGAItK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

ctg118_53

Search NORINE for peptide: strict or relaxed

AMP-binding (508..908): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAFFsGVTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

AMP-binding (1923..2325): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDLGmVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

c00119_3300026.. - Region 1 - terpene

Download region GenBank file

Location: 1 - 15,899 nt. (total: 15,899 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

c00136_3300026.. - Region 1 - T1PKS

Download region GenBank file

Location: 59,724 - 107,286 nt. (total: 47,563 nt) Show pHMM detection rules used

T1PKS: cds(PKS_AT and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00141_3300026.. - Region 1 - NRPS

Download region GenBank file

Location: 21,273 - 76,976 nt. (total: 55,704 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 21272 - 76976:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - phe) + (X - D-X) + (X - phe) + (orn - asn - tyr - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg141_32

Search NORINE for peptide: strict or relaxed

AMP-binding (483..890): orn

NRPSPredictor2: orn

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: orn

Stachelhaus prediction details:

Stachelhaus sequence:: DVGElatIDK
Nearest Stachelhaus code:: orn
Stachelhaus code match:: 70% (weak)

AMP-binding (1554..1967): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DaTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

AMP-binding (2631..3026): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DASTiAAIGK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 90% (moderate)

AMP-binding (3691..4086): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAaiIAGigK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 60% (weak)

ctg141_33

Search NORINE for peptide: strict or relaxed

AMP-binding (471..866): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAaTmVgIgK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 60% (weak)

AMP-binding (1531..1925): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: DAWTiAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 90% (moderate)

ctg141_34

Search NORINE for peptide: strict or relaxed

AMP-binding (496..897): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: orn, lys, arg
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDLGmVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

AMP-binding (1559..1969): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DTEdiGTviK
Nearest Stachelhaus code:: lys-b
Stachelhaus code match:: 60% (weak)

ctg141_36

Search NORINE for peptide: strict or relaxed

AMP-binding (335..730): X

NRPSPredictor2: tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: tyr, bht
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAAsLAgVgK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 70% (weak)

AMP-binding (1395..1788): phe

NRPSPredictor2: phe

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: phe, trp
Single AA prediction:: phe

Stachelhaus prediction details:

Stachelhaus sequence:: DAWTiAAVCK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 90% (moderate)