3300026518_12 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00022_3300026.. (original name was: 3300026518.a:Ga0256829_1000053)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	betalactone	99,568	122,272

c00064_3300026.. (original name was: 3300026518.a:Ga0256829_1000033)

Region	Type	From	To	Most similar known cluster		Similarity
Region 64.1	ectoine	120,048	130,443

c00071_3300026.. (original name was: 3300026518.a:Ga0256829_1000118)

Region	Type	From	To	Most similar known cluster		Similarity
Region 71.1	NRPS	37,547	103,870

Region	Type	From	To	Similarity
Region 22.1	betalactone	99,568	122,272
Region 64.1	ectoine	120,048	130,443
Region 71.1	NRPS	37,547	103,870

No secondary metabolite regions were found in these records:: c00001_3300026.. (original name was: 3300026518.a:Ga0256829_1002052); c00002_3300026.. (original name was: 3300026518.a:Ga0256829_1001569); c00003_3300026.. (original name was: 3300026518.a:Ga0256829_1001506); c00004_3300026.. (original name was: 3300026518.a:Ga0256829_1000841); c00005_3300026.. (original name was: 3300026518.a:Ga0256829_1000610); c00006_3300026.. (original name was: 3300026518.a:Ga0256829_1000267); c00007_3300026.. (original name was: 3300026518.a:Ga0256829_1000099); c00008_3300026.. (original name was: 3300026518.a:Ga0256829_1017409); c00009_3300026.. (original name was: 3300026518.a:Ga0256829_1011277); c00010_3300026.. (original name was: 3300026518.a:Ga0256829_1006041); c00011_3300026.. (original name was: 3300026518.a:Ga0256829_1001953); c00012_3300026.. (original name was: 3300026518.a:Ga0256829_1000526); c00013_3300026.. (original name was: 3300026518.a:Ga0256829_1001645); c00014_3300026.. (original name was: 3300026518.a:Ga0256829_1000742); c00015_3300026.. (original name was: 3300026518.a:Ga0256829_1000889); c00016_3300026.. (original name was: 3300026518.a:Ga0256829_1000210); c00017_3300026.. (original name was: 3300026518.a:Ga0256829_1000035); c00018_3300026.. (original name was: 3300026518.a:Ga0256829_1003667); c00019_3300026.. (original name was: 3300026518.a:Ga0256829_1001742); c00020_3300026.. (original name was: 3300026518.a:Ga0256829_1001063); c00021_3300026.. (original name was: 3300026518.a:Ga0256829_1000235); c00023_3300026.. (original name was: 3300026518.a:Ga0256829_1003146); c00024_3300026.. (original name was: 3300026518.a:Ga0256829_1009299); c00025_3300026.. (original name was: 3300026518.a:Ga0256829_1000444); c00026_3300026.. (original name was: 3300026518.a:Ga0256829_1000360); c00027_3300026.. (original name was: 3300026518.a:Ga0256829_1000203); c00028_3300026.. (original name was: 3300026518.a:Ga0256829_1001921); c00029_3300026.. (original name was: 3300026518.a:Ga0256829_1000636); c00030_3300026.. (original name was: 3300026518.a:Ga0256829_1000198); c00031_3300026.. (original name was: 3300026518.a:Ga0256829_1001711); c00032_3300026.. (original name was: 3300026518.a:Ga0256829_1016984); c00033_3300026.. (original name was: 3300026518.a:Ga0256829_1000138); c00034_3300026.. (original name was: 3300026518.a:Ga0256829_1000282); c00035_3300026.. (original name was: 3300026518.a:Ga0256829_1008568); c00036_3300026.. (original name was: 3300026518.a:Ga0256829_1000174); c00037_3300026.. (original name was: 3300026518.a:Ga0256829_1000347); c00038_3300026.. (original name was: 3300026518.a:Ga0256829_1000218); c00039_3300026.. (original name was: 3300026518.a:Ga0256829_1000159); c00040_3300026.. (original name was: 3300026518.a:Ga0256829_1000339); c00041_3300026.. (original name was: 3300026518.a:Ga0256829_1002196); c00042_3300026.. (original name was: 3300026518.a:Ga0256829_1000336); c00043_3300026.. (original name was: 3300026518.a:Ga0256829_1000457); c00044_3300026.. (original name was: 3300026518.a:Ga0256829_1002035); c00045_3300026.. (original name was: 3300026518.a:Ga0256829_1000200); c00046_3300026.. (original name was: 3300026518.a:Ga0256829_1001920); c00047_3300026.. (original name was: 3300026518.a:Ga0256829_1000385); c00048_3300026.. (original name was: 3300026518.a:Ga0256829_1000991); c00049_3300026.. (original name was: 3300026518.a:Ga0256829_1003698); c00050_3300026.. (original name was: 3300026518.a:Ga0256829_1001986); c00051_3300026.. (original name was: 3300026518.a:Ga0256829_1000216); c00052_3300026.. (original name was: 3300026518.a:Ga0256829_1002108); c00053_3300026.. (original name was: 3300026518.a:Ga0256829_1001869); c00054_3300026.. (original name was: 3300026518.a:Ga0256829_1002475); c00055_3300026.. (original name was: 3300026518.a:Ga0256829_1001744); c00056_3300026.. (original name was: 3300026518.a:Ga0256829_1000268); c00057_3300026.. (original name was: 3300026518.a:Ga0256829_1005506); c00058_3300026.. (original name was: 3300026518.a:Ga0256829_1006192); c00059_3300026.. (original name was: 3300026518.a:Ga0256829_1006657); c00060_3300026.. (original name was: 3300026518.a:Ga0256829_1000227); c00061_3300026.. (original name was: 3300026518.a:Ga0256829_1011337); c00062_3300026.. (original name was: 3300026518.a:Ga0256829_1014543); c00063_3300026.. (original name was: 3300026518.a:Ga0256829_1001211); c00065_3300026.. (original name was: 3300026518.a:Ga0256829_1001678); c00066_3300026.. (original name was: 3300026518.a:Ga0256829_1000166); c00067_3300026.. (original name was: 3300026518.a:Ga0256829_1000266); c00068_3300026.. (original name was: 3300026518.a:Ga0256829_1001984); c00069_3300026.. (original name was: 3300026518.a:Ga0256829_1000699); c00070_3300026.. (original name was: 3300026518.a:Ga0256829_1008125); c00072_3300026.. (original name was: 3300026518.a:Ga0256829_1000504); c00073_3300026.. (original name was: 3300026518.a:Ga0256829_1000684); c00074_3300026.. (original name was: 3300026518.a:Ga0256829_1000258); c00075_3300026.. (original name was: 3300026518.a:Ga0256829_1000086); c00076_3300026.. (original name was: 3300026518.a:Ga0256829_1002123); c00077_3300026.. (original name was: 3300026518.a:Ga0256829_1000398); c00078_3300026.. (original name was: 3300026518.a:Ga0256829_1000601)

Compact view

c00022_3300026.. - Region 1 - betalactone

Download region GenBank file

Location: 99,568 - 122,272 nt. (total: 22,705 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00064_3300026.. - Region 1 - ectoine

Download region GenBank file

Location: 120,048 - 130,443 nt. (total: 10,396 nt) Show pHMM detection rules used

ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00071_3300026.. - Region 1 - NRPS

Download region GenBank file

Location: 37,547 - 103,870 nt. (total: 66,324 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 37546 - 103870:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (asn) + (ser - ser) + (X - X - ser - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg71_62

CAL_domain (51..506): pk

minowa: NH2

Prediction, score:

NH2: 30.3
fatty_acid: 29.0
shikimic_acid: 19.5
AHBA: 11.0
Acetyl-CoA: -0.8

ctg71_63

Search NORINE for peptide: strict or relaxed

AMP-binding (471..863): asn

NRPSPredictor2: asn

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asp

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGhVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 90% (moderate)

ctg71_64

Search NORINE for peptide: strict or relaxed

AMP-binding (498..894): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHVSLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (1575..1971): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHVSLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

ctg71_65

Search NORINE for peptide: strict or relaxed

AMP-binding (517..914): X

NRPSPredictor2: asp, asn, glu, gln, aad

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAeyIGAIsK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

AMP-binding (1596..1992): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVWnMgLIhK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 70% (weak)

AMP-binding (2672..3068): ser

NRPSPredictor2: ser

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: ser, thr, dhpg, hpg
Small clusters prediction:: ser
Single AA prediction:: ser

Stachelhaus prediction details:

Stachelhaus sequence:: DVWHVSLIDK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 100% (strong)

AMP-binding (3750..4146): X

NRPSPredictor2: glu, gln

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: glu, gln
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVWnMgLIhK
Nearest Stachelhaus code:: ser
Stachelhaus code match:: 70% (weak)