3300027276_52 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00017_3300027.. (original name was: 3300027276.a:Ga0208297_1000171)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	NRPS	114,709	163,636

Region	Type	From	To	Most similar known cluster	Similarity
Region 17.1	NRPS	114,709	163,636

No secondary metabolite regions were found in these records:: c00001_3300027.. (original name was: 3300027276.a:Ga0208297_1003532); c00002_3300027.. (original name was: 3300027276.a:Ga0208297_1002401); c00003_3300027.. (original name was: 3300027276.a:Ga0208297_1001211); c00004_3300027.. (original name was: 3300027276.a:Ga0208297_1001869); c00005_3300027.. (original name was: 3300027276.a:Ga0208297_1000725); c00006_3300027.. (original name was: 3300027276.a:Ga0208297_1003096); c00007_3300027.. (original name was: 3300027276.a:Ga0208297_1001686); c00008_3300027.. (original name was: 3300027276.a:Ga0208297_1003541); c00009_3300027.. (original name was: 3300027276.a:Ga0208297_1001866); c00010_3300027.. (original name was: 3300027276.a:Ga0208297_1002649); c00011_3300027.. (original name was: 3300027276.a:Ga0208297_1003776); c00012_3300027.. (original name was: 3300027276.a:Ga0208297_1000769); c00013_3300027.. (original name was: 3300027276.a:Ga0208297_1004590); c00014_3300027.. (original name was: 3300027276.a:Ga0208297_1001971); c00015_3300027.. (original name was: 3300027276.a:Ga0208297_1002255); c00016_3300027.. (original name was: 3300027276.a:Ga0208297_1004777); c00018_3300027.. (original name was: 3300027276.a:Ga0208297_1001235); c00019_3300027.. (original name was: 3300027276.a:Ga0208297_1000500); c00020_3300027.. (original name was: 3300027276.a:Ga0208297_1001470); c00021_3300027.. (original name was: 3300027276.a:Ga0208297_1001667); c00022_3300027.. (original name was: 3300027276.a:Ga0208297_1005646); c00023_3300027.. (original name was: 3300027276.a:Ga0208297_1005114); c00024_3300027.. (original name was: 3300027276.a:Ga0208297_1001434); c00025_3300027.. (original name was: 3300027276.a:Ga0208297_1001239); c00026_3300027.. (original name was: 3300027276.a:Ga0208297_1002597); c00027_3300027.. (original name was: 3300027276.a:Ga0208297_1000764); c00028_3300027.. (original name was: 3300027276.a:Ga0208297_1002444); c00029_3300027.. (original name was: 3300027276.a:Ga0208297_1000650); c00030_3300027.. (original name was: 3300027276.a:Ga0208297_1000885); c00031_3300027.. (original name was: 3300027276.a:Ga0208297_1001558); c00032_3300027.. (original name was: 3300027276.a:Ga0208297_1000352); c00033_3300027.. (original name was: 3300027276.a:Ga0208297_1000809); c00034_3300027.. (original name was: 3300027276.a:Ga0208297_1000480); c00035_3300027.. (original name was: 3300027276.a:Ga0208297_1000870); c00036_3300027.. (original name was: 3300027276.a:Ga0208297_1000579); c00037_3300027.. (original name was: 3300027276.a:Ga0208297_1000664); c00038_3300027.. (original name was: 3300027276.a:Ga0208297_1001246); c00039_3300027.. (original name was: 3300027276.a:Ga0208297_1000761); c00040_3300027.. (original name was: 3300027276.a:Ga0208297_1000450); c00041_3300027.. (original name was: 3300027276.a:Ga0208297_1002328); c00042_3300027.. (original name was: 3300027276.a:Ga0208297_1000582); c00043_3300027.. (original name was: 3300027276.a:Ga0208297_1002079); c00044_3300027.. (original name was: 3300027276.a:Ga0208297_1000222); c00045_3300027.. (original name was: 3300027276.a:Ga0208297_1003264); c00046_3300027.. (original name was: 3300027276.a:Ga0208297_1001735); c00047_3300027.. (original name was: 3300027276.a:Ga0208297_1003722); c00048_3300027.. (original name was: 3300027276.a:Ga0208297_1001006); c00049_3300027.. (original name was: 3300027276.a:Ga0208297_1001577)

Compact view

c00017_3300027.. - Region 1 - NRPS

Download region GenBank file

Location: 114,709 - 163,636 nt. (total: 48,928 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 114708 - 163636:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg17_133

Search NORINE for peptide: strict or relaxed

AMP-binding (11..372): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: vvsFFGcgmK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 40% (weak)

AMP-binding (1000..1391): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmFtGLVcK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)

AMP-binding (2013..2404): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmFmGiVDK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 70% (weak)