3300027690_21 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00008_3300027.. (original name was: 3300027690.a:Ga0209164_1000220)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	ectoine	128,767	139,159

c00019_3300027.. (original name was: 3300027690.a:Ga0209164_1000003)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	NRPS	383,123	452,460
Region 19.2	NRPS	541,327	590,237

Region	Type	From	To	Similarity
Region 8.1	ectoine	128,767	139,159
Region 19.1	NRPS	383,123	452,460
Region 19.2	NRPS	541,327	590,237

No secondary metabolite regions were found in these records:: c00001_3300027.. (original name was: 3300027690.a:Ga0209164_1000295); c00002_3300027.. (original name was: 3300027690.a:Ga0209164_1000192); c00003_3300027.. (original name was: 3300027690.a:Ga0209164_1000097); c00004_3300027.. (original name was: 3300027690.a:Ga0209164_1000258); c00005_3300027.. (original name was: 3300027690.a:Ga0209164_1006307); c00006_3300027.. (original name was: 3300027690.a:Ga0209164_1001448); c00007_3300027.. (original name was: 3300027690.a:Ga0209164_1000487); c00009_3300027.. (original name was: 3300027690.a:Ga0209164_1000639); c00010_3300027.. (original name was: 3300027690.a:Ga0209164_1000202); c00011_3300027.. (original name was: 3300027690.a:Ga0209164_1000145); c00012_3300027.. (original name was: 3300027690.a:Ga0209164_1000023); c00013_3300027.. (original name was: 3300027690.a:Ga0209164_1001311); c00014_3300027.. (original name was: 3300027690.a:Ga0209164_1000125); c00015_3300027.. (original name was: 3300027690.a:Ga0209164_1000332); c00016_3300027.. (original name was: 3300027690.a:Ga0209164_1001022); c00017_3300027.. (original name was: 3300027690.a:Ga0209164_1000037); c00018_3300027.. (original name was: 3300027690.a:Ga0209164_1000083); c00020_3300027.. (original name was: 3300027690.a:Ga0209164_1003397); c00021_3300027.. (original name was: 3300027690.a:Ga0209164_1000269)

Compact view

c00008_3300027.. - Region 1 - ectoine

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Location: 128,767 - 139,159 nt. (total: 10,393 nt) Show pHMM detection rules used

ectoine: ectoine_synt

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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c00019_3300027.. - Region 1 - NRPS

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Location: 383,123 - 452,460 nt. (total: 69,338 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 383122 - 452460:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (D-ile) + (X - asn - ala - gly)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg19_384

Search NORINE for peptide: strict or relaxed

AMP-binding (55..487): X

NRPSPredictor2: hydrophobic-aliphatic

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DmiaFGVlmK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 50% (weak)

CAL_domain (797..1184): pk

minowa: fatty_acid

Prediction, score:

fatty_acid: 44.9
NH2: 23.1
Acetyl-CoA: 10.2
shikimic_acid: 0.0
AHBA: 0.0

AMP-binding (1854..2254): ile

NRPSPredictor2: ile

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: ile

Stachelhaus prediction details:

Stachelhaus sequence:: DAmFLGVTFK
Nearest Stachelhaus code:: ile
Stachelhaus code match:: 90% (moderate)

ctg19_385

Search NORINE for peptide: strict or relaxed

AMP-binding (469..874): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAQDiGVVDK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 90% (moderate)

AMP-binding (1534..1931): asn

NRPSPredictor2: asn

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: asp, asn, glu, gln, aad
Small clusters prediction:: asp, asn
Single AA prediction:: asn

Stachelhaus prediction details:

Stachelhaus sequence:: DLTKIGEVGK
Nearest Stachelhaus code:: asn
Stachelhaus code match:: 100% (strong)

AMP-binding (2581..2972): ala

NRPSPredictor2: ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: ala

Stachelhaus prediction details:

Stachelhaus sequence:: DLFNNALTYK
Nearest Stachelhaus code:: ala
Stachelhaus code match:: 100% (strong)

AMP-binding (3626..4022): gly

NRPSPredictor2: gly

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: gly

Stachelhaus prediction details:

Stachelhaus sequence:: DILQLGVvWK
Nearest Stachelhaus code:: gly
Stachelhaus code match:: 90% (moderate)

c00019_3300027.. - Region 2 - NRPS

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Location: 541,327 - 590,237 nt. (total: 48,911 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains