3300028048_108 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00023_3300028.. (original name was: 3300028048.a:Ga0256405_10004045)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	sactipeptide	15,084	28,518

c00077_3300028.. (original name was: 3300028048.a:Ga0256405_10006434)

Region	Type	From	To	Most similar known cluster		Similarity
Region 77.1	NRPS	1	18,775

Region	Type	From	To	Most similar known cluster	Similarity
Region 23.1	sactipeptide	15,084	28,518
Region 77.1	NRPS	1	18,775

No secondary metabolite regions were found in these records:: c00001_3300028.. (original name was: 3300028048.a:Ga0256405_10011401); c00002_3300028.. (original name was: 3300028048.a:Ga0256405_10032653); c00003_3300028.. (original name was: 3300028048.a:Ga0256405_10014377); c00004_3300028.. (original name was: 3300028048.a:Ga0256405_10009366); c00005_3300028.. (original name was: 3300028048.a:Ga0256405_10001855); c00006_3300028.. (original name was: 3300028048.a:Ga0256405_10025582); c00007_3300028.. (original name was: 3300028048.a:Ga0256405_10024293); c00008_3300028.. (original name was: 3300028048.a:Ga0256405_10007972); c00009_3300028.. (original name was: 3300028048.a:Ga0256405_10004612); c00010_3300028.. (original name was: 3300028048.a:Ga0256405_10010543); c00011_3300028.. (original name was: 3300028048.a:Ga0256405_10009362); c00012_3300028.. (original name was: 3300028048.a:Ga0256405_10007222); c00013_3300028.. (original name was: 3300028048.a:Ga0256405_10002827); c00014_3300028.. (original name was: 3300028048.a:Ga0256405_10002101); c00015_3300028.. (original name was: 3300028048.a:Ga0256405_10031258); c00016_3300028.. (original name was: 3300028048.a:Ga0256405_10019913); c00017_3300028.. (original name was: 3300028048.a:Ga0256405_10009051); c00018_3300028.. (original name was: 3300028048.a:Ga0256405_10005426); c00019_3300028.. (original name was: 3300028048.a:Ga0256405_10044981); c00020_3300028.. (original name was: 3300028048.a:Ga0256405_10004077); c00021_3300028.. (original name was: 3300028048.a:Ga0256405_10015204); c00022_3300028.. (original name was: 3300028048.a:Ga0256405_10006782); c00024_3300028.. (original name was: 3300028048.a:Ga0256405_10024463); c00025_3300028.. (original name was: 3300028048.a:Ga0256405_10014986); c00026_3300028.. (original name was: 3300028048.a:Ga0256405_10022350); c00027_3300028.. (original name was: 3300028048.a:Ga0256405_10011792); c00028_3300028.. (original name was: 3300028048.a:Ga0256405_10008395); c00029_3300028.. (original name was: 3300028048.a:Ga0256405_10018391); c00030_3300028.. (original name was: 3300028048.a:Ga0256405_10004449); c00031_3300028.. (original name was: 3300028048.a:Ga0256405_10021694); c00032_3300028.. (original name was: 3300028048.a:Ga0256405_10043629); c00033_3300028.. (original name was: 3300028048.a:Ga0256405_10007176); c00034_3300028.. (original name was: 3300028048.a:Ga0256405_10058734); c00035_3300028.. (original name was: 3300028048.a:Ga0256405_10018542); c00036_3300028.. (original name was: 3300028048.a:Ga0256405_10006482); c00037_3300028.. (original name was: 3300028048.a:Ga0256405_10000655); c00038_3300028.. (original name was: 3300028048.a:Ga0256405_10006989); c00039_3300028.. (original name was: 3300028048.a:Ga0256405_10036435); c00040_3300028.. (original name was: 3300028048.a:Ga0256405_10054365); c00041_3300028.. (original name was: 3300028048.a:Ga0256405_10007771); c00042_3300028.. (original name was: 3300028048.a:Ga0256405_10026496); c00043_3300028.. (original name was: 3300028048.a:Ga0256405_10001889); c00044_3300028.. (original name was: 3300028048.a:Ga0256405_10006144); c00045_3300028.. (original name was: 3300028048.a:Ga0256405_10002946); c00046_3300028.. (original name was: 3300028048.a:Ga0256405_10003355); c00047_3300028.. (original name was: 3300028048.a:Ga0256405_10006867); c00048_3300028.. (original name was: 3300028048.a:Ga0256405_10010172); c00049_3300028.. (original name was: 3300028048.a:Ga0256405_10010181); c00050_3300028.. (original name was: 3300028048.a:Ga0256405_10016404); c00051_3300028.. (original name was: 3300028048.a:Ga0256405_10036875); c00052_3300028.. (original name was: 3300028048.a:Ga0256405_10016455); c00053_3300028.. (original name was: 3300028048.a:Ga0256405_10006280); c00054_3300028.. (original name was: 3300028048.a:Ga0256405_10001555); c00055_3300028.. (original name was: 3300028048.a:Ga0256405_10018747); c00056_3300028.. (original name was: 3300028048.a:Ga0256405_10028822); c00057_3300028.. (original name was: 3300028048.a:Ga0256405_10054819); c00058_3300028.. (original name was: 3300028048.a:Ga0256405_10000609); c00059_3300028.. (original name was: 3300028048.a:Ga0256405_10004352); c00060_3300028.. (original name was: 3300028048.a:Ga0256405_10006565); c00061_3300028.. (original name was: 3300028048.a:Ga0256405_10009118); c00062_3300028.. (original name was: 3300028048.a:Ga0256405_10015274); c00063_3300028.. (original name was: 3300028048.a:Ga0256405_10005146); c00064_3300028.. (original name was: 3300028048.a:Ga0256405_10035587); c00065_3300028.. (original name was: 3300028048.a:Ga0256405_10006635); c00066_3300028.. (original name was: 3300028048.a:Ga0256405_10004857); c00067_3300028.. (original name was: 3300028048.a:Ga0256405_10002363); c00068_3300028.. (original name was: 3300028048.a:Ga0256405_10009199); c00069_3300028.. (original name was: 3300028048.a:Ga0256405_10026823); c00070_3300028.. (original name was: 3300028048.a:Ga0256405_10001633); c00071_3300028.. (original name was: 3300028048.a:Ga0256405_10010460); c00072_3300028.. (original name was: 3300028048.a:Ga0256405_10017160); c00073_3300028.. (original name was: 3300028048.a:Ga0256405_10011524); c00074_3300028.. (original name was: 3300028048.a:Ga0256405_10015858); c00075_3300028.. (original name was: 3300028048.a:Ga0256405_10021175); c00076_3300028.. (original name was: 3300028048.a:Ga0256405_10024993); c00078_3300028.. (original name was: 3300028048.a:Ga0256405_10053637)

Compact view

c00023_3300028.. - Region 1 - sactipeptide

Download region GenBank file

Location: 15,084 - 28,518 nt. (total: 13,435 nt) Show pHMM detection rules used

Region on contig edge.

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.

c00077_3300028.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 18,775 nt. (total: 18,775 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 18775:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg77_4

Search NORINE for peptide: strict or relaxed

AMP-binding (428..816): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DALmMGgVyK
Nearest Stachelhaus code:: phe
Stachelhaus code match:: 70% (weak)

AMP-binding (1431..1830): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DaqfDgGITK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 60% (weak)