3300028048_76 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00008_3300028.. (original name was: 3300028048.a:Ga0256405_10005166)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	NRPS	1	23,112

c00024_3300028.. (original name was: 3300028048.a:Ga0256405_10002653)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	sactipeptide	4,386	24,553

c00030_3300028.. (original name was: 3300028048.a:Ga0256405_10003087)

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	NRPS	1	26,729

c00045_3300028.. (original name was: 3300028048.a:Ga0256405_10002089)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	betalactone	17,746	41,604

Region	Type	From	To	Similarity
Region 8.1	NRPS	1	23,112
Region 24.1	sactipeptide	4,386	24,553
Region 30.1	NRPS	1	26,729
Region 45.1	betalactone	17,746	41,604

No secondary metabolite regions were found in these records:: c00001_3300028.. (original name was: 3300028048.a:Ga0256405_10007234); c00002_3300028.. (original name was: 3300028048.a:Ga0256405_10000795); c00003_3300028.. (original name was: 3300028048.a:Ga0256405_10000788); c00004_3300028.. (original name was: 3300028048.a:Ga0256405_10010921); c00005_3300028.. (original name was: 3300028048.a:Ga0256405_10004765); c00006_3300028.. (original name was: 3300028048.a:Ga0256405_10002029); c00007_3300028.. (original name was: 3300028048.a:Ga0256405_10002121); c00009_3300028.. (original name was: 3300028048.a:Ga0256405_10004278); c00010_3300028.. (original name was: 3300028048.a:Ga0256405_10006745); c00011_3300028.. (original name was: 3300028048.a:Ga0256405_10021025); c00012_3300028.. (original name was: 3300028048.a:Ga0256405_10045735); c00013_3300028.. (original name was: 3300028048.a:Ga0256405_10052347); c00014_3300028.. (original name was: 3300028048.a:Ga0256405_10013302); c00015_3300028.. (original name was: 3300028048.a:Ga0256405_10004336); c00016_3300028.. (original name was: 3300028048.a:Ga0256405_10003669); c00017_3300028.. (original name was: 3300028048.a:Ga0256405_10034249); c00018_3300028.. (original name was: 3300028048.a:Ga0256405_10006258); c00019_3300028.. (original name was: 3300028048.a:Ga0256405_10055345); c00020_3300028.. (original name was: 3300028048.a:Ga0256405_10042052); c00021_3300028.. (original name was: 3300028048.a:Ga0256405_10059101); c00022_3300028.. (original name was: 3300028048.a:Ga0256405_10007471); c00023_3300028.. (original name was: 3300028048.a:Ga0256405_10000916); c00025_3300028.. (original name was: 3300028048.a:Ga0256405_10058375); c00026_3300028.. (original name was: 3300028048.a:Ga0256405_10000803); c00027_3300028.. (original name was: 3300028048.a:Ga0256405_10003350); c00028_3300028.. (original name was: 3300028048.a:Ga0256405_10020071); c00029_3300028.. (original name was: 3300028048.a:Ga0256405_10007022); c00031_3300028.. (original name was: 3300028048.a:Ga0256405_10003811); c00032_3300028.. (original name was: 3300028048.a:Ga0256405_10001678); c00033_3300028.. (original name was: 3300028048.a:Ga0256405_10000652); c00034_3300028.. (original name was: 3300028048.a:Ga0256405_10030770); c00035_3300028.. (original name was: 3300028048.a:Ga0256405_10002320); c00036_3300028.. (original name was: 3300028048.a:Ga0256405_10000945); c00037_3300028.. (original name was: 3300028048.a:Ga0256405_10001873); c00038_3300028.. (original name was: 3300028048.a:Ga0256405_10051967); c00039_3300028.. (original name was: 3300028048.a:Ga0256405_10024430); c00040_3300028.. (original name was: 3300028048.a:Ga0256405_10001917); c00041_3300028.. (original name was: 3300028048.a:Ga0256405_10028013); c00042_3300028.. (original name was: 3300028048.a:Ga0256405_10001630); c00043_3300028.. (original name was: 3300028048.a:Ga0256405_10000466); c00044_3300028.. (original name was: 3300028048.a:Ga0256405_10005598); c00046_3300028.. (original name was: 3300028048.a:Ga0256405_10008137); c00047_3300028.. (original name was: 3300028048.a:Ga0256405_10002308); c00048_3300028.. (original name was: 3300028048.a:Ga0256405_10003089); c00049_3300028.. (original name was: 3300028048.a:Ga0256405_10000442); c00050_3300028.. (original name was: 3300028048.a:Ga0256405_10014664); c00051_3300028.. (original name was: 3300028048.a:Ga0256405_10002050); c00052_3300028.. (original name was: 3300028048.a:Ga0256405_10000265); c00053_3300028.. (original name was: 3300028048.a:Ga0256405_10042436); c00054_3300028.. (original name was: 3300028048.a:Ga0256405_10001106); c00055_3300028.. (original name was: 3300028048.a:Ga0256405_10003518); c00056_3300028.. (original name was: 3300028048.a:Ga0256405_10004679); c00057_3300028.. (original name was: 3300028048.a:Ga0256405_10004903)

Compact view

c00008_3300028.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 23,112 nt. (total: 23,112 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 23112:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg8_14

Search NORINE for peptide: strict or relaxed

AMP-binding (428..814): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAhlLGlVyK
Nearest Stachelhaus code:: gln
Stachelhaus code match:: 60% (weak)

AMP-binding (1428..1827): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DaqfDgGITK
Nearest Stachelhaus code:: cys
Stachelhaus code match:: 60% (weak)

c00024_3300028.. - Region 1 - sactipeptide

Download region GenBank file

Location: 4,386 - 24,553 nt. (total: 20,168 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.

c00030_3300028.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 26,729 nt. (total: 26,729 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

c00045_3300028.. - Region 1 - betalactone

Download region GenBank file

Location: 17,746 - 41,604 nt. (total: 23,859 nt) Show pHMM detection rules used

betalactone: (HMGL-like and AMP-binding)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it