3300029080_9 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00062_3300029.. (original name was: 3300029080.a:Ga0169200_100329)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	NRPS	10,794	47,409

c00075_3300029.. (original name was: 3300029080.a:Ga0169200_100215)

Region	Type	From	To	Most similar known cluster		Similarity
Region 75.1	sactipeptide	41,651	61,791

Region	Type	From	To	Most similar known cluster	Similarity
Region 62.1	NRPS	10,794	47,409
Region 75.1	sactipeptide	41,651	61,791

No secondary metabolite regions were found in these records:: c00001_3300029.. (original name was: 3300029080.a:Ga0169200_102247); c00002_3300029.. (original name was: 3300029080.a:Ga0169200_102223); c00003_3300029.. (original name was: 3300029080.a:Ga0169200_102136); c00004_3300029.. (original name was: 3300029080.a:Ga0169200_102111); c00005_3300029.. (original name was: 3300029080.a:Ga0169200_101950); c00006_3300029.. (original name was: 3300029080.a:Ga0169200_101804); c00007_3300029.. (original name was: 3300029080.a:Ga0169200_101680); c00008_3300029.. (original name was: 3300029080.a:Ga0169200_101642); c00009_3300029.. (original name was: 3300029080.a:Ga0169200_101555); c00010_3300029.. (original name was: 3300029080.a:Ga0169200_101825); c00011_3300029.. (original name was: 3300029080.a:Ga0169200_101534); c00012_3300029.. (original name was: 3300029080.a:Ga0169200_101488); c00013_3300029.. (original name was: 3300029080.a:Ga0169200_101473); c00014_3300029.. (original name was: 3300029080.a:Ga0169200_101603); c00015_3300029.. (original name was: 3300029080.a:Ga0169200_101409); c00016_3300029.. (original name was: 3300029080.a:Ga0169200_101399); c00017_3300029.. (original name was: 3300029080.a:Ga0169200_101302); c00018_3300029.. (original name was: 3300029080.a:Ga0169200_101256); c00019_3300029.. (original name was: 3300029080.a:Ga0169200_101251); c00020_3300029.. (original name was: 3300029080.a:Ga0169200_101163); c00021_3300029.. (original name was: 3300029080.a:Ga0169200_101093); c00022_3300029.. (original name was: 3300029080.a:Ga0169200_101018); c00023_3300029.. (original name was: 3300029080.a:Ga0169200_100919); c00024_3300029.. (original name was: 3300029080.a:Ga0169200_100304); c00025_3300029.. (original name was: 3300029080.a:Ga0169200_100052); c00026_3300029.. (original name was: 3300029080.a:Ga0169200_101414); c00027_3300029.. (original name was: 3300029080.a:Ga0169200_100250); c00028_3300029.. (original name was: 3300029080.a:Ga0169200_100626); c00029_3300029.. (original name was: 3300029080.a:Ga0169200_102261); c00030_3300029.. (original name was: 3300029080.a:Ga0169200_101582); c00031_3300029.. (original name was: 3300029080.a:Ga0169200_100224); c00032_3300029.. (original name was: 3300029080.a:Ga0169200_100292); c00033_3300029.. (original name was: 3300029080.a:Ga0169200_101170); c00034_3300029.. (original name was: 3300029080.a:Ga0169200_100200); c00035_3300029.. (original name was: 3300029080.a:Ga0169200_100140); c00036_3300029.. (original name was: 3300029080.a:Ga0169200_100375); c00037_3300029.. (original name was: 3300029080.a:Ga0169200_100095); c00038_3300029.. (original name was: 3300029080.a:Ga0169200_100471); c00039_3300029.. (original name was: 3300029080.a:Ga0169200_100323); c00040_3300029.. (original name was: 3300029080.a:Ga0169200_100417); c00041_3300029.. (original name was: 3300029080.a:Ga0169200_100275); c00042_3300029.. (original name was: 3300029080.a:Ga0169200_100995); c00043_3300029.. (original name was: 3300029080.a:Ga0169200_100510); c00044_3300029.. (original name was: 3300029080.a:Ga0169200_100160); c00045_3300029.. (original name was: 3300029080.a:Ga0169200_100261); c00046_3300029.. (original name was: 3300029080.a:Ga0169200_101795); c00047_3300029.. (original name was: 3300029080.a:Ga0169200_100825); c00048_3300029.. (original name was: 3300029080.a:Ga0169200_100121); c00049_3300029.. (original name was: 3300029080.a:Ga0169200_101229); c00050_3300029.. (original name was: 3300029080.a:Ga0169200_100356); c00051_3300029.. (original name was: 3300029080.a:Ga0169200_102044); c00052_3300029.. (original name was: 3300029080.a:Ga0169200_100686); c00053_3300029.. (original name was: 3300029080.a:Ga0169200_102022); c00054_3300029.. (original name was: 3300029080.a:Ga0169200_100179); c00055_3300029.. (original name was: 3300029080.a:Ga0169200_101257); c00056_3300029.. (original name was: 3300029080.a:Ga0169200_100287); c00057_3300029.. (original name was: 3300029080.a:Ga0169200_100190); c00058_3300029.. (original name was: 3300029080.a:Ga0169200_101048); c00059_3300029.. (original name was: 3300029080.a:Ga0169200_100272); c00060_3300029.. (original name was: 3300029080.a:Ga0169200_100660); c00061_3300029.. (original name was: 3300029080.a:Ga0169200_101202); c00063_3300029.. (original name was: 3300029080.a:Ga0169200_100799); c00064_3300029.. (original name was: 3300029080.a:Ga0169200_101428); c00065_3300029.. (original name was: 3300029080.a:Ga0169200_101234); c00066_3300029.. (original name was: 3300029080.a:Ga0169200_100361); c00067_3300029.. (original name was: 3300029080.a:Ga0169200_101255); c00068_3300029.. (original name was: 3300029080.a:Ga0169200_100382); c00069_3300029.. (original name was: 3300029080.a:Ga0169200_100393); c00070_3300029.. (original name was: 3300029080.a:Ga0169200_100274); c00071_3300029.. (original name was: 3300029080.a:Ga0169200_100565); c00072_3300029.. (original name was: 3300029080.a:Ga0169200_100468); c00073_3300029.. (original name was: 3300029080.a:Ga0169200_101767); c00074_3300029.. (original name was: 3300029080.a:Ga0169200_101476); c00076_3300029.. (original name was: 3300029080.a:Ga0169200_100797); c00077_3300029.. (original name was: 3300029080.a:Ga0169200_101734); c00078_3300029.. (original name was: 3300029080.a:Ga0169200_100473); c00079_3300029.. (original name was: 3300029080.a:Ga0169200_100504); c00080_3300029.. (original name was: 3300029080.a:Ga0169200_101236); c00081_3300029.. (original name was: 3300029080.a:Ga0169200_100169); c00082_3300029.. (original name was: 3300029080.a:Ga0169200_100848); c00083_3300029.. (original name was: 3300029080.a:Ga0169200_100654); c00084_3300029.. (original name was: 3300029080.a:Ga0169200_101089); c00085_3300029.. (original name was: 3300029080.a:Ga0169200_100119); c00086_3300029.. (original name was: 3300029080.a:Ga0169200_100701); c00087_3300029.. (original name was: 3300029080.a:Ga0169200_100185); c00088_3300029.. (original name was: 3300029080.a:Ga0169200_100864); c00089_3300029.. (original name was: 3300029080.a:Ga0169200_101064); c00090_3300029.. (original name was: 3300029080.a:Ga0169200_100870)

Compact view

c00062_3300029.. - Region 1 - NRPS

Download region GenBank file

Location: 10,794 - 47,409 nt. (total: 36,616 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 10793 - 47409:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg62_29

Search NORINE for peptide: strict or relaxed

AMP-binding (20..419): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLtdgGIsK
Nearest Stachelhaus code:: aeo
Stachelhaus code match:: 60% (weak)

AMP-binding (1033..1421): X

NRPSPredictor2: val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: val, leu, ile, abu, iva
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAmfsGAIfK
Nearest Stachelhaus code:: bht
Stachelhaus code match:: 60% (weak)

AMP-binding (2027..2418): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAiTTGgVsK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 70% (weak)

c00075_3300029.. - Region 1 - sactipeptide

Download region GenBank file

Location: 41,651 - 61,791 nt. (total: 20,141 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.