3300029732_18 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00024_3300029.. (original name was: 3300029732.a:Ga0245266_100309)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	NRPS	1	51,606

c00037_3300029.. (original name was: 3300029732.a:Ga0245266_100656)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	sactipeptide	14,774	34,959

c00038_3300029.. (original name was: 3300029732.a:Ga0245266_100387)

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	NRPS	13,166	57,002

Region	Type	From	To	Similarity
Region 24.1	NRPS	1	51,606
Region 37.1	sactipeptide	14,774	34,959
Region 38.1	NRPS	13,166	57,002

No secondary metabolite regions were found in these records:: c00001_3300029.. (original name was: 3300029732.a:Ga0245266_101491); c00002_3300029.. (original name was: 3300029732.a:Ga0245266_101367); c00003_3300029.. (original name was: 3300029732.a:Ga0245266_100797); c00004_3300029.. (original name was: 3300029732.a:Ga0245266_100774); c00005_3300029.. (original name was: 3300029732.a:Ga0245266_100771); c00006_3300029.. (original name was: 3300029732.a:Ga0245266_100521); c00007_3300029.. (original name was: 3300029732.a:Ga0245266_100481); c00008_3300029.. (original name was: 3300029732.a:Ga0245266_100214); c00009_3300029.. (original name was: 3300029732.a:Ga0245266_100184); c00010_3300029.. (original name was: 3300029732.a:Ga0245266_100107); c00011_3300029.. (original name was: 3300029732.a:Ga0245266_100077); c00012_3300029.. (original name was: 3300029732.a:Ga0245266_107506); c00013_3300029.. (original name was: 3300029732.a:Ga0245266_107050); c00014_3300029.. (original name was: 3300029732.a:Ga0245266_106933); c00015_3300029.. (original name was: 3300029732.a:Ga0245266_103869); c00016_3300029.. (original name was: 3300029732.a:Ga0245266_101901); c00017_3300029.. (original name was: 3300029732.a:Ga0245266_100658); c00018_3300029.. (original name was: 3300029732.a:Ga0245266_100283); c00019_3300029.. (original name was: 3300029732.a:Ga0245266_100636); c00020_3300029.. (original name was: 3300029732.a:Ga0245266_100213); c00021_3300029.. (original name was: 3300029732.a:Ga0245266_100306); c00022_3300029.. (original name was: 3300029732.a:Ga0245266_100232); c00023_3300029.. (original name was: 3300029732.a:Ga0245266_106894); c00025_3300029.. (original name was: 3300029732.a:Ga0245266_103122); c00026_3300029.. (original name was: 3300029732.a:Ga0245266_100290); c00027_3300029.. (original name was: 3300029732.a:Ga0245266_100615); c00028_3300029.. (original name was: 3300029732.a:Ga0245266_100145); c00029_3300029.. (original name was: 3300029732.a:Ga0245266_100646); c00030_3300029.. (original name was: 3300029732.a:Ga0245266_100065); c00031_3300029.. (original name was: 3300029732.a:Ga0245266_100094); c00032_3300029.. (original name was: 3300029732.a:Ga0245266_107468); c00033_3300029.. (original name was: 3300029732.a:Ga0245266_100379); c00034_3300029.. (original name was: 3300029732.a:Ga0245266_100499); c00035_3300029.. (original name was: 3300029732.a:Ga0245266_100612); c00036_3300029.. (original name was: 3300029732.a:Ga0245266_102050); c00039_3300029.. (original name was: 3300029732.a:Ga0245266_100950); c00040_3300029.. (original name was: 3300029732.a:Ga0245266_101109); c00041_3300029.. (original name was: 3300029732.a:Ga0245266_102670)

Compact view

c00024_3300029.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 51,606 nt. (total: 51,606 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 51606:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (cys)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg24_17

Search NORINE for peptide: strict or relaxed

AMP-binding (423..820): cys

NRPSPredictor2: cys

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: cys
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMFnvGvIWK
Nearest Stachelhaus code:: thr
Stachelhaus code match:: 70% (weak)

ctg24_20

Search NORINE for peptide: strict or relaxed

AMP-binding (14..394): dhb

NRPSPredictor2: dhb

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: dhb, sal
Small clusters prediction:: dhb, sal
Single AA prediction:: dhb

Stachelhaus prediction details:

Stachelhaus sequence:: aLPifGVVcK
Nearest Stachelhaus code:: dhb
Stachelhaus code match:: 60% (weak)

ctg24_29

Search NORINE for peptide: strict or relaxed

AMP-binding (12..418): X

NRPSPredictor2: (unknown)

SVM prediction details:

NOTE: outside applicability domain

Predicted physicochemical class:: N/A
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: hilFIAstsK
Nearest Stachelhaus code:: pro
Stachelhaus code match:: 40% (weak)

c00037_3300029.. - Region 1 - sactipeptide

Download region GenBank file

Location: 14,774 - 34,959 nt. (total: 20,186 nt) Show pHMM detection rules used

sactipeptide: (subtilosin or thuricin or TIGR04404 or TIGR03973)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Sactipeptides

Sactipeptide predictions

Sactipeptides - No core peptides found.

Sactipeptides

Core peptide predictions

No core peptides found.

c00038_3300029.. - Region 1 - NRPS

Download region GenBank file

Location: 13,166 - 57,002 nt. (total: 43,837 nt) Show pHMM detection rules used

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 13165 - 57002:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg38_37

Search NORINE for peptide: strict or relaxed

AMP-binding (247..650): X

NRPSPredictor2: (unknown)

SVM prediction details:

Predicted physicochemical class:: hydrophilic
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DlQDlGCVEK
Nearest Stachelhaus code:: lys
Stachelhaus code match:: 80% (moderate)