3300029857_22 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

c00055_3300029.. (original name was: 3300029857.a:Ga0245297_1001822)

Region	Type	From	To	Most similar known cluster		Similarity
Region 55.1	NRPS	1	19,497

c00100_3300029.. (original name was: 3300029857.a:Ga0245297_1007354)

Region	Type	From	To	Most similar known cluster		Similarity
Region 100.1	NRPS	1	5,162

Region	Type	From	To	Most similar known cluster	Similarity
Region 55.1	NRPS	1	19,497
Region 100.1	NRPS	1	5,162

No secondary metabolite regions were found in these records:: c00001_3300029.. (original name was: 3300029857.a:Ga0245297_1011208); c00002_3300029.. (original name was: 3300029857.a:Ga0245297_1010610); c00003_3300029.. (original name was: 3300029857.a:Ga0245297_1005997); c00004_3300029.. (original name was: 3300029857.a:Ga0245297_1004806); c00005_3300029.. (original name was: 3300029857.a:Ga0245297_1004093); c00006_3300029.. (original name was: 3300029857.a:Ga0245297_1003838); c00007_3300029.. (original name was: 3300029857.a:Ga0245297_1003797); c00008_3300029.. (original name was: 3300029857.a:Ga0245297_1011792); c00009_3300029.. (original name was: 3300029857.a:Ga0245297_1000326); c00010_3300029.. (original name was: 3300029857.a:Ga0245297_1005137); c00011_3300029.. (original name was: 3300029857.a:Ga0245297_1005162); c00012_3300029.. (original name was: 3300029857.a:Ga0245297_1004976); c00013_3300029.. (original name was: 3300029857.a:Ga0245297_1003131); c00014_3300029.. (original name was: 3300029857.a:Ga0245297_1001977); c00015_3300029.. (original name was: 3300029857.a:Ga0245297_1007821); c00016_3300029.. (original name was: 3300029857.a:Ga0245297_1012338); c00017_3300029.. (original name was: 3300029857.a:Ga0245297_1001728); c00018_3300029.. (original name was: 3300029857.a:Ga0245297_1001092); c00019_3300029.. (original name was: 3300029857.a:Ga0245297_1000445); c00020_3300029.. (original name was: 3300029857.a:Ga0245297_1000965); c00021_3300029.. (original name was: 3300029857.a:Ga0245297_1001227); c00022_3300029.. (original name was: 3300029857.a:Ga0245297_1000848); c00023_3300029.. (original name was: 3300029857.a:Ga0245297_1000337); c00024_3300029.. (original name was: 3300029857.a:Ga0245297_1005496); c00025_3300029.. (original name was: 3300029857.a:Ga0245297_1000750); c00026_3300029.. (original name was: 3300029857.a:Ga0245297_1006243); c00027_3300029.. (original name was: 3300029857.a:Ga0245297_1001976); c00028_3300029.. (original name was: 3300029857.a:Ga0245297_1003008); c00029_3300029.. (original name was: 3300029857.a:Ga0245297_1004607); c00030_3300029.. (original name was: 3300029857.a:Ga0245297_1001249); c00031_3300029.. (original name was: 3300029857.a:Ga0245297_1000865); c00032_3300029.. (original name was: 3300029857.a:Ga0245297_1005642); c00033_3300029.. (original name was: 3300029857.a:Ga0245297_1002842); c00034_3300029.. (original name was: 3300029857.a:Ga0245297_1000986); c00035_3300029.. (original name was: 3300029857.a:Ga0245297_1000321); c00036_3300029.. (original name was: 3300029857.a:Ga0245297_1000849); c00037_3300029.. (original name was: 3300029857.a:Ga0245297_1000568); c00038_3300029.. (original name was: 3300029857.a:Ga0245297_1001734); c00039_3300029.. (original name was: 3300029857.a:Ga0245297_1000645); c00040_3300029.. (original name was: 3300029857.a:Ga0245297_1001147); c00041_3300029.. (original name was: 3300029857.a:Ga0245297_1001917); c00042_3300029.. (original name was: 3300029857.a:Ga0245297_1001899); c00043_3300029.. (original name was: 3300029857.a:Ga0245297_1001117); c00044_3300029.. (original name was: 3300029857.a:Ga0245297_1002279); c00045_3300029.. (original name was: 3300029857.a:Ga0245297_1008501); c00046_3300029.. (original name was: 3300029857.a:Ga0245297_1007688); c00047_3300029.. (original name was: 3300029857.a:Ga0245297_1002115); c00048_3300029.. (original name was: 3300029857.a:Ga0245297_1012473); c00049_3300029.. (original name was: 3300029857.a:Ga0245297_1000810); c00050_3300029.. (original name was: 3300029857.a:Ga0245297_1002872); c00051_3300029.. (original name was: 3300029857.a:Ga0245297_1000333); c00052_3300029.. (original name was: 3300029857.a:Ga0245297_1002985); c00053_3300029.. (original name was: 3300029857.a:Ga0245297_1003512); c00054_3300029.. (original name was: 3300029857.a:Ga0245297_1000799); c00056_3300029.. (original name was: 3300029857.a:Ga0245297_1002850); c00057_3300029.. (original name was: 3300029857.a:Ga0245297_1010719); c00058_3300029.. (original name was: 3300029857.a:Ga0245297_1002055); c00059_3300029.. (original name was: 3300029857.a:Ga0245297_1003453); c00060_3300029.. (original name was: 3300029857.a:Ga0245297_1002672); c00061_3300029.. (original name was: 3300029857.a:Ga0245297_1001275); c00062_3300029.. (original name was: 3300029857.a:Ga0245297_1011995); c00063_3300029.. (original name was: 3300029857.a:Ga0245297_1002162); c00064_3300029.. (original name was: 3300029857.a:Ga0245297_1003194); c00065_3300029.. (original name was: 3300029857.a:Ga0245297_1003639); c00066_3300029.. (original name was: 3300029857.a:Ga0245297_1002298); c00067_3300029.. (original name was: 3300029857.a:Ga0245297_1008215); c00068_3300029.. (original name was: 3300029857.a:Ga0245297_1000779); c00069_3300029.. (original name was: 3300029857.a:Ga0245297_1000470); c00070_3300029.. (original name was: 3300029857.a:Ga0245297_1000588); c00071_3300029.. (original name was: 3300029857.a:Ga0245297_1000683); c00072_3300029.. (original name was: 3300029857.a:Ga0245297_1000823); c00073_3300029.. (original name was: 3300029857.a:Ga0245297_1000393); c00074_3300029.. (original name was: 3300029857.a:Ga0245297_1001985); c00075_3300029.. (original name was: 3300029857.a:Ga0245297_1000863); c00076_3300029.. (original name was: 3300029857.a:Ga0245297_1001226); c00077_3300029.. (original name was: 3300029857.a:Ga0245297_1006543); c00078_3300029.. (original name was: 3300029857.a:Ga0245297_1000970); c00079_3300029.. (original name was: 3300029857.a:Ga0245297_1001561); c00080_3300029.. (original name was: 3300029857.a:Ga0245297_1001303); c00081_3300029.. (original name was: 3300029857.a:Ga0245297_1001310); c00082_3300029.. (original name was: 3300029857.a:Ga0245297_1001802); c00083_3300029.. (original name was: 3300029857.a:Ga0245297_1000272); c00084_3300029.. (original name was: 3300029857.a:Ga0245297_1002670); c00085_3300029.. (original name was: 3300029857.a:Ga0245297_1002715); c00086_3300029.. (original name was: 3300029857.a:Ga0245297_1001128); c00087_3300029.. (original name was: 3300029857.a:Ga0245297_1003242); c00088_3300029.. (original name was: 3300029857.a:Ga0245297_1003440); c00089_3300029.. (original name was: 3300029857.a:Ga0245297_1002812); c00090_3300029.. (original name was: 3300029857.a:Ga0245297_1001241); c00091_3300029.. (original name was: 3300029857.a:Ga0245297_1005288); c00092_3300029.. (original name was: 3300029857.a:Ga0245297_1000489); c00093_3300029.. (original name was: 3300029857.a:Ga0245297_1012424); c00094_3300029.. (original name was: 3300029857.a:Ga0245297_1001032); c00095_3300029.. (original name was: 3300029857.a:Ga0245297_1000237); c00096_3300029.. (original name was: 3300029857.a:Ga0245297_1000516); c00097_3300029.. (original name was: 3300029857.a:Ga0245297_1000640); c00098_3300029.. (original name was: 3300029857.a:Ga0245297_1001418); c00099_3300029.. (original name was: 3300029857.a:Ga0245297_1001414); c00101_3300029.. (original name was: 3300029857.a:Ga0245297_1004175); c00102_3300029.. (original name was: 3300029857.a:Ga0245297_1001803); c00103_3300029.. (original name was: 3300029857.a:Ga0245297_1001609); c00104_3300029.. (original name was: 3300029857.a:Ga0245297_1007003); c00105_3300029.. (original name was: 3300029857.a:Ga0245297_1000904); c00106_3300029.. (original name was: 3300029857.a:Ga0245297_1001975)

Compact view

c00055_3300029.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 19,497 nt. (total: 19,497 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 19497:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg55_1

Search NORINE for peptide: strict or relaxed

AMP-binding (514..905): X

NRPSPredictor2: phe, trp, phg, tyr, bht

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aromatic
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DAiTTGgVsK
Nearest Stachelhaus code:: tyr
Stachelhaus code match:: 70% (weak)

c00100_3300029.. - Region 1 - NRPS

Download region GenBank file

Location: 1 - 5,162 nt. (total: 5,162 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: (cds(Condensation and (AMP-binding or A-OX)) or (Condensation and AMP-binding))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

Detailed domain annotation

Selected features only

Show module domains

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 5162:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg100_1

Search NORINE for peptide: strict or relaxed

AMP-binding (20..419): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: phe, trp, phg, tyr, bht
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVLtdgGIsK
Nearest Stachelhaus code:: aeo
Stachelhaus code match:: 60% (weak)

AMP-binding (1033..1421): X

NRPSPredictor2: gly, ala, val, leu, ile, abu, iva

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DamfSGVVlK
Nearest Stachelhaus code:: glu
Stachelhaus code match:: 60% (weak)