FastQCFastQC Report
Tue 7 May 2013
bin_W-DeltaSymb.fastq.keep

Summary

[OK] Basic Statistics

Measure Value
Filename bin_W-DeltaSymb.fastq.keep
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 5136427
Filtered Sequences 0
Sequence length 150
%GC 50

[FAIL] Per base sequence quality

Per base quality graph

[FAIL] Per sequence quality scores

Per Sequence quality graph

[WARN] Per base sequence content

Per base sequence content

[OK] Per base GC content

Per base GC content graph

[OK] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[OK] Sequence Duplication Levels

Duplication level graph

[OK] Overrepresented sequences

No overrepresented sequences

[WARN] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTTTT 5165805 7.200785 9.490885 145-146
AAAAA 4403060 6.453753 7.440298 75-79
ATTTT 2434060 3.427175 4.6623073 1
GGGGG 2824040 3.3784244 4.722837 145-146
AAAAT 2251725 3.2674572 4.125959 1
CCGGC 2260485 3.0046227 3.388328 4