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WARNING. WARNING. WARNING. 

This project has been automatically analyzed by the 'draftQD.pl' script, a
crude zeroth order, project clean up script, designed to identify and remove
low quality and contaminant reads from a project. The heuristics used by the
script may both remove valid project data and fail to remove bona fide
contaminants. The following sets of reads have been removed from the project
fasta in this edit_dir only. The trace data of possible contaminants has not
been removed from the project. Therefore, if you are using automated assembly
procedures which recreate a project fasta from data in the partitions, then
reads removed in this edit_dir will be present in new file. 

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Even after removal of 54000 (!!) problem reads, the GC plot shows a pronounced
and distinct second peak at >about 70% GC.  A GC plot of the singlets matches
very well the second GC peak of the main assembly.  Based on the calculated
depth and genome size, the project still has far too many contigs which is
consitent with a contaminant. There are about 6000 reads in the assembly and
another several thousand in the singlets file with 0.7 GC fraction which
corresponds to roughly 10% contaminant (after cleanup). Blast of singlets
against nt produced many significant plasmid, transposon, vector, e coli, and
chloroplast hits. 

reads removed from fasta:

    6423 reads.2RdContigs
   40356 reads.lowQual.q20lt100
     494 reads.possible.eukaryota
   54231 total