genelib report for 3634484, SFNA

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameGlomus intraradices
genus_speciesGlomus intraradices
strain
source_librarysource_library_name
vector_name
source_dnasource_dna_nameglin_0001
source_dna_number3634484
source_dna_typeWhole Genome
seq_projectproject_number3634484
project_typeProduction
draft_analysis_group_desmicrobe4
deadline
seq_librarylibrary_nameSFNA
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userdscott
date_entered14-FEB-06
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number110976
dna_received
sample_description
ribosomal_profile

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192908989N/A
Failed0610N/A

Contigs Output: 89

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
841
21
13

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(84)_SFNA39599.9848gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
99.8848gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
99.8848Glomus intraradices#1764 bp##rna
99.4848gi|14275538|emb|Y17640.2|GFA17640 Glomus fasciculatum 18S rRNA gene, partial, isolate BEG53, clone pKL5-3a
99.5848gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene
CLUSTER0(84)_SFNA41199.8878gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
99.7878gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
99.7878Glomus intraradices#1764 bp##rna
99.3878gi|14275538|emb|Y17640.2|GFA17640 Glomus fasciculatum 18S rRNA gene, partial, isolate BEG53, clone pKL5-3a
99.4878gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene
CLUSTER0(84)_SFNA43399.8877gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
99.7877gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
99.7877Glomus intraradices#1764 bp##rna
99.3877gi|14275538|emb|Y17640.2|GFA17640 Glomus fasciculatum 18S rRNA gene, partial, isolate BEG53, clone pKL5-3a
99.4877gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene
CLUSTER0(84)_SFNA452100877gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
99.9877gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
99.9877Glomus intraradices#1764 bp##rna
99.5877gi|14275538|emb|Y17640.2|GFA17640 Glomus fasciculatum 18S rRNA gene, partial, isolate BEG53, clone pKL5-3a
99.7877gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene
CLUSTER4(2)_SFNA43799.2786gi|2645176|dbj|D83027.1| Cnidium officinale gene for 18S rRNA, complete sequence
99.2786gi|2645177|dbj|D83028.1| Ligusticum chuanxiong gene for 18S rRNA, complete sequence
99.2786gi|7595372|gb|AF206852.1| Apium graveolens 18S ribosomal RNA gene, complete sequence
99.2786Apium graveolens#1739 bp##rna
99.2786Ligusticum chuanxiong#1808 bp##rna
CLUSTER1(1)_SFNA43689.7662gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
89.6662gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
89.6662Glomus intraradices#1764 bp##rna
89.4662gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene
89.4662Glomus intraradices#1747 bp##rna
CLUSTER2(1)_SFNA47190.5630gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
90.3630gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
90.3630gi|14275538|emb|Y17640.2|GFA17640 Glomus fasciculatum 18S rRNA gene, partial, isolate BEG53, clone pKL5-3a
90.3630Glomus intraradices#1764 bp##rna
90.3630gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene
CLUSTER3(1)_SFNA42396.9779gi|49066430|gb|AY635831.1| Glomus intraradices isolate AFTOL-ID 48 18S ribosomal RNA gene, partial sequence
96.8779gi|14252959|emb|AJ301859.1|GIN301859 Glomus intraradices partial 18S rRNA gene, clone pWD164-1-5
96.8779Glomus intraradices#1764 bp##rna
96.5779gi|14275538|emb|Y17640.2|GFA17640 Glomus fasciculatum 18S rRNA gene, partial, isolate BEG53, clone pKL5-3a
96.5779gi|2743|emb|X58725.1|GI18SRRNA G.intraradices 18S rRNA gene