genelib report for 4000189, SCSW

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameMicromonas pusilla NOUM17 (RCC 299)
genus_speciesMicromonas pusilla
strainNOUM17 (RCC 299)
source_librarysource_library_name
vector_name
source_dnasource_dna_nameMipu_0002
source_dna_number4000189
source_dna_typeWhole Genome
seq_projectproject_number4000189
project_type2005 Microbe Projects
draft_analysis_group_des
deadline30-SEP-05
seq_librarylibrary_nameSCSW
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userdscott
date_entered21-OCT-05
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number112716
dna_received
sample_description
ribosomal_profile

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192939393N/A
Failed0300N/A

Contigs Output: 93

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
931

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER0(93)_SCSW686599.9866gi|33327225|gb|AF525874.1| Uncultured marine eukaryote clone UEPACMp5 18S ribosomal RNA gene, complete sequence
99.9866gi|65427923|gb|AY954994.1| Micromonas pusilla strain CCMP1545 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.9866gi|65427932|gb|AY955003.1| Micromonas pusilla strain CCMP490 genotype A 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.9866gi|65427934|gb|AY955005.1| Micromonas pusilla strain CCMP491 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.7866gi|33327218|gb|AF525867.1| Uncultured marine eukaryote clone UEPAC40p3 18S ribosomal RNA gene, complete sequence
CLUSTER0(93)_SCSW686999.9874gi|33327225|gb|AF525874.1| Uncultured marine eukaryote clone UEPACMp5 18S ribosomal RNA gene, complete sequence
99.9874gi|65427923|gb|AY954994.1| Micromonas pusilla strain CCMP1545 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.9874gi|65427932|gb|AY955003.1| Micromonas pusilla strain CCMP490 genotype A 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.9874gi|65427934|gb|AY955005.1| Micromonas pusilla strain CCMP491 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.7874gi|33327218|gb|AF525867.1| Uncultured marine eukaryote clone UEPAC40p3 18S ribosomal RNA gene, complete sequence
CLUSTER0(93)_SCSW6879100859gi|33327225|gb|AF525874.1| Uncultured marine eukaryote clone UEPACMp5 18S ribosomal RNA gene, complete sequence
100859gi|65427923|gb|AY954994.1| Micromonas pusilla strain CCMP1545 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
100859gi|65427932|gb|AY955003.1| Micromonas pusilla strain CCMP490 genotype A 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
100859gi|65427934|gb|AY955005.1| Micromonas pusilla strain CCMP491 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.8859gi|33327218|gb|AF525867.1| Uncultured marine eukaryote clone UEPAC40p3 18S ribosomal RNA gene, complete sequence
CLUSTER0(93)_SCSW6895100870gi|33327225|gb|AF525874.1| Uncultured marine eukaryote clone UEPACMp5 18S ribosomal RNA gene, complete sequence
100870gi|65427923|gb|AY954994.1| Micromonas pusilla strain CCMP1545 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
100870gi|65427932|gb|AY955003.1| Micromonas pusilla strain CCMP490 genotype A 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
100870gi|65427934|gb|AY955005.1| Micromonas pusilla strain CCMP491 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence
99.8870gi|33327218|gb|AF525867.1| Uncultured marine eukaryote clone UEPAC40p3 18S ribosomal RNA gene, complete sequence