genelib report for 4000265, SUCS

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Dehalococcoides sp. VS
	genus_species	Dehalococcoides sp.
	strain	VS
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Desp_0002
	source_dna_number	4000265
	source_dna_type	Whole Genome
seq_project	project_number	4000265
	project_type	2005 Microbe Projects
	draft_analysis_group_des
	deadline	30-SEP-05
seq_library	library_name	SUCS
	library_type	16s ribosomal
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	1.5
	plates_expected
	depth_target
	insert_user	dscott
	date_entered	24-JUN-05
seq_lib_vector	vector_name	pCR4-TOPO
shadow_parent	library_name
account	account_no	625909
	account_name	Seq General, Program Management
account_group	account_group	SEQUENCING DEPT ACCOUNTS
institution	code_name
sample	sample_number	112770
	dna_received
	sample_description
	ribosomal_profile

Processing Summary:

Reads Input: 192

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	192	95	95	95	N/A
Failed	0	1	0	0	N/A

Contigs Output: 95

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
52	1
19	1
10	1
8	1
2	1
1	4

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER2(52)_SUCS406	100	1414	Dehalococcoides sp. VS AY323233.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1376	chloroethene-contaminated site clone DHC-lf13 sp. AF388542.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1376	chloroethene-contaminated site clone DHC-dll sp. AF388536.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1376	chloroethene-contaminated sludge pond clone DHC-bmtv sp. AF388533.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1377	chloroethene-contaminated site clone DHC-vic sp. AF388550.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
CLUSTER2(52)_SUCS422	100	1420	Dehalococcoides sp. VS AY323233.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1376	chloroethene-contaminated site clone DHC-lf13 sp. AF388542.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1376	chloroethene-contaminated site clone DHC-dll sp. AF388536.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1376	chloroethene-contaminated sludge pond clone DHC-bmtv sp. AF388533.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1377	chloroethene-contaminated site clone DHC-vic sp. AF388550.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
CLUSTER2(52)_SUCS477	100	1420	Dehalococcoides sp. VS AY323233.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1376	chloroethene-contaminated site clone DHC-lf13 sp. AF388542.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1376	chloroethene-contaminated site clone DHC-dll sp. AF388536.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1376	chloroethene-contaminated sludge pond clone DHC-bmtv sp. AF388533.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1377	chloroethene-contaminated site clone DHC-vic sp. AF388550.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
CLUSTER2(52)_SUCS478	100	1421	Dehalococcoides sp. VS AY323233.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1377	chloroethene-contaminated site clone DHC-lf13 sp. AF388542.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	100	1377	chloroethene-contaminated site clone DHC-dll sp. AF388536.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1377	chloroethene-contaminated sludge pond clone DHC-bmtv sp. AF388533.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	99.9	1378	chloroethene-contaminated site clone DHC-vic sp. AF388550.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
CLUSTER1(19)_SUCS423	97.2	1445	-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
	93.8	1448	mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
	93.4	1448	anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
	93.5	1451	mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
	93.2	1449	anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER1(19)_SUCS438	97.1	1445	-temperature biodegraded Canadian oil reservoir clone PL-10B5 AY570596.1 (Bacteria; Bacteroidetes; Bacteroidales)
	93.7	1448	mesophilic anaerobic BSA digester clone BSA1B-12 AB175366.1 (Bacteria; Bacteroidetes; Bacteroidales)
	93.4	1448	anaerobic digestor clone BC27 U81676.2 (Bacteria; Bacteroidetes; Bacteroidales)
	93.5	1451	mesophilic anaerobic BSA digester clone BSA1B-13 AB175367.1 (Bacteria; Bacteroidetes; Bacteroidales)
	93.1	1449	anaerobic sludge clone EUB50-2 AY693829.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER3(10)_SUCS389	99.7	1442	chlorobenzene-degrading consortium clone IA-10 AJ488067.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	97.8	1390	Clostridium sp. str. FCB90-3 AJ229251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.6	1443	-temperature biodegraded Canadian oil reservoir clone PL-23B11 AY570608.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	92.6	1263	Clostridium-like species U27711.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.6	89	Clostridium-like species U27711.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	92.6	1263	Clostridium-like species U27710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.6	88	Clostridium-like species U27710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER3(10)_SUCS430	99.7	1442	chlorobenzene-degrading consortium clone IA-10 AJ488067.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	97.8	1390	Clostridium sp. str. FCB90-3 AJ229251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.6	1443	-temperature biodegraded Canadian oil reservoir clone PL-23B11 AY570608.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	92.6	1263	Clostridium-like species U27711.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.6	89	Clostridium-like species U27711.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	92.6	1263	Clostridium-like species U27710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.6	88	Clostridium-like species U27710.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
CLUSTER5(8)_SUCS419	99.7	1457	sulfate-reducing fluidized-bed reactor clone SR_FBR_L44 AY340839.1 (Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema)
	99.8	1450	gold mine isolate str. SA-10 AY695841.1 (Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema)
	99.7	1457	gold mine isolate str. SA-8 AY695839.1 (Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema)
	99.7	1438	TCE-contaminated site clone ccslm209 AY133081.1 (Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema)
	95.3	1459	TCB-transforming consortium clone SJA-102 AJ009481.1 (Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema)
CLUSTER4(2)_SUCS424	99.4	1413	soil collected near uranium mill tailings Gittersee/Coschuetz clone Gitt-GS-109 AJ582209.1 (Bacteria; Bacteroidetes; Bacteroidales)
	97.6	1347	uranium mill tailing clone KF-Gitt2-47 AJ295642.1 (Bacteria; Bacteroidetes; Bacteroidales)
	95.4	1427	Bacteroides sp. 22C AY554420.1 (Bacteria; Bacteroidetes; Bacteroidales)
	95.3	1429	anaerobic digestor clone BB23 AF129860.1 (Bacteria; Bacteroidetes; Bacteroidales)
	95.3	1429	anaerobic digestor clone BB23 AF129860.1 (Bacteria; Bacteroidetes; Bacteroidales)
CLUSTER0(1)_SUCS416	97.9	1443	bioreactor clone mle1-42 AF280863.1 (Bacteria; Synergistes; Synergistes)
	97.3	973	DCE dechlorinating consortium clone DCE29 AJ249260.1 (Bacteria; Synergistes; Synergistes)
	94.2	451	DCE dechlorinating consortium clone DCE29 AJ249260.1 (Bacteria; Synergistes; Synergistes)
	92.4	763	termite gut homogenate clone Rs-N28 AB089064.2 (Bacteria; Synergistes; Synergistes)
	96.5	198	termite gut homogenate clone Rs-N28 AB089064.2 (Bacteria; Synergistes; Synergistes)
	92.2	179	termite gut homogenate clone Rs-N28 AB089064.2 (Bacteria; Synergistes; Synergistes)
	92	599	bioreactor clone tbr1-2 AF280820.1 (Bacteria; Synergistes; Thermanaerovibrio)
	89.4	444	bioreactor clone tbr1-2 AF280820.1 (Bacteria; Synergistes; Thermanaerovibrio)
	96.7	150	bioreactor clone tbr1-2 AF280820.1 (Bacteria; Synergistes; Thermanaerovibrio)
	91.2	588	bioreactor clone mle1-5 AF280844.1 (Bacteria; Synergistes; Thermanaerovibrio)
	88.1	447	bioreactor clone mle1-5 AF280844.1 (Bacteria; Synergistes; Thermanaerovibrio)
	96.7	150	bioreactor clone mle1-5 AF280844.1 (Bacteria; Synergistes; Thermanaerovibrio)
CLUSTER6(1)_SUCS462	98.8	1427	Dehalococcoides sp. VS AY323233.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	98.8	1383	chloroethene-contaminated site clone DHC-lf13 sp. AF388542.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	98.8	1383	chloroethene-contaminated site clone DHC-dll sp. AF388536.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	98.7	1383	chloroethene-contaminated sludge pond clone DHC-bmtv sp. AF388533.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
	98.6	1384	chloroethene-contaminated site clone DHC-vic sp. AF388550.1 (Bacteria; Chloroflexi; "Dehalococcoidetes)
CLUSTER7(1)_SUCS459	93.8	1437	Sedimentibacter saalensis AJ404680.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	93.2	1434	-temperature biodegraded Canadian oil reservoir clone PL-5B8 AY570591.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	90.7	1407	uranium mine sediment clone P3IB-23 AF414571.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	91.3	1372	mesophilic anaerobic BSA digester clone BSA1B-05 AB175359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	90.8	1397	Sedimentibacter sp. str. BRS2 AY221992.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
CLUSTER8(1)_SUCS476	90	1105	chlorobenzene-degrading consortium clone IA-10 AJ488067.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	94.8	210	chlorobenzene-degrading consortium clone IA-10 AJ488067.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	89.3	1029	Clostridium sp. str. FCB90-3 AJ229251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	96.8	156	Clostridium sp. str. FCB90-3 AJ229251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	88	1029	-temperature biodegraded Canadian oil reservoir clone PL-23B11 AY570608.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	94.7	206	-temperature biodegraded Canadian oil reservoir clone PL-23B11 AY570608.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	84.5	1007	anoxic bulk soil flooded rice microcosm clone BSV87 clone AJ229231.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	84.1	497	anoxic bulk soil flooded rice microcosm clone BSV30 AJ229192.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)
	87.6	170	anoxic bulk soil flooded rice microcosm clone BSV30 AJ229192.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae)