| bio_class_genus_species | bio_classification_type | Single Organism |
|---|---|---|
| bio_classification_name | Shewanella putrefaciens 200 | |
| genus_species | Shewanella putrefaciens | |
| strain | 200 | |
| source_library | source_library_name | |
| vector_name | ||
| source_dna | source_dna_name | Shpu_0004 |
| source_dna_number | 4001141 | |
| source_dna_type | Whole Genome | |
| seq_project | project_number | 4001141 |
| project_type | 2004 Microbe Projects | |
| draft_analysis_group_des | ||
| deadline | 30-SEP-05 | |
| seq_library | library_name | SUCB |
| library_type | 16s ribosomal | |
| sequencing_type | Ribosomal | |
| internal_customer | Ribosomal Sequencing | |
| re_array | ||
| insert_size_type | small | |
| target_insert_size | 1.5 | |
| plates_expected | ||
| depth_target | ||
| insert_user | dscott | |
| date_entered | 24-JUN-05 | |
| seq_lib_vector | vector_name | pCR4-TOPO |
| shadow_parent | library_name | |
| account | account_no | 625909 |
| account_name | Seq General, Program Management | |
| account_group | account_group | SEQUENCING DEPT ACCOUNTS |
| institution | code_name | |
| sample | sample_number | 113229 |
| dna_received | ||
| sample_description | ||
| ribosomal_profile |
| Read Pairing | Assemble | Qual Filters | Blast Filter | Chimera Checking | |
|---|---|---|---|---|---|
| Passed | 192 | 63 | 61 | 61 | N/A |
| Failed | 0 | 33 | 2 | 0 | N/A |
| Size | Number of Clusters |
|---|---|
| 60 | 1 |
| 1 | 1 |
| Cluster Rep ID | Pct-Id | Align len | Hit |
|---|---|---|---|
| CLUSTER0(60)_SUCB409 | 99.2 | 878 | Joinvillea ascendens#1754 bp##rna |
| 99.2 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 99.2 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 98.9 | 878 | Festuca rubra#1745 bp##rna | |
| 98.9 | 879 | Oryza sativa#1754 bp##rna | |
| CLUSTER0(60)_SUCB411 | 99.2 | 878 | Joinvillea ascendens#1754 bp##rna |
| 99.2 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 99.2 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 98.9 | 878 | Festuca rubra#1745 bp##rna | |
| 98.9 | 879 | Oryza sativa#1754 bp##rna | |
| CLUSTER0(60)_SUCB413 | 99.1 | 878 | Joinvillea ascendens#1754 bp##rna |
| 99.1 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 99.1 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 98.7 | 878 | Festuca rubra#1745 bp##rna | |
| 98.7 | 879 | Oryza sativa#1754 bp##rna | |
| CLUSTER0(60)_SUCB430 | 99.2 | 878 | Joinvillea ascendens#1754 bp##rna |
| 99.2 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 99.2 | 878 | Joinvillea ascendens#1754 bp##rna | |
| 98.9 | 878 | Festuca rubra#1745 bp##rna | |
| 98.9 | 879 | Oryza sativa#1754 bp##rna | |
| CLUSTER1(1)_SUCB419 | 89.2 | 732 | Festuca rubra#1745 bp##rna |
| 90.2 | 652 | Joinvillea ascendens#1754 bp##rna | |
| 90.2 | 652 | Joinvillea ascendens#1754 bp##rna | |
| 90.2 | 652 | Joinvillea ascendens#1754 bp##rna | |
| 88.7 | 732 | Flagellaria indica#1747 bp##rna |