genelib report for 4001263, SCTG

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Lactobacillus helveticus
	genus_species	Lactobacillus helveticus
	strain
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Lahe_0001
	source_dna_number	4001263
	source_dna_type	Whole Genome
seq_project	project_number	4001263
	project_type	WFO
	draft_analysis_group_des
	deadline	30-SEP-05
seq_library	library_name	SCTG
	library_type	16s ribosomal Bacteria
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	1.5
	plates_expected
	depth_target
	insert_user	dscott
	date_entered	21-OCT-05
seq_lib_vector	vector_name	pCR4-TOPO_eubacteria
shadow_parent	library_name
account	account_no	626881
	account_name	Sequencing Technology, GT Program
account_group	account_group	PROGRAMS ACCOUNTS
institution	code_name
sample	sample_number	113307
	dna_received
	sample_description
	ribosomal_profile

Processing Summary:

Reads Input: 288

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	192	80	79	79	N/A
Failed	96	16	1	0	N/A

Contigs Output: 79

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
77	1
1	2

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER0(77)_SCTG5593	100	1486	Lactobacillus helveticus AY369116.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.6	1486	Lactobacillus gallinarum str. ATCC 33199 AJ417737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.4	1486	Lactobacillus suntoryeus str. LH5 AY675251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.4	1486	Lactobacillus suntoryeus str. M4 AY644397.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.3	1486	Lactobacillus suntoryeus str. LH AY675248.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
CLUSTER0(77)_SCTG5609	99.7	1486	Lactobacillus helveticus AY369116.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.3	1486	Lactobacillus gallinarum str. ATCC 33199 AJ417737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.1	1486	Lactobacillus suntoryeus str. LH5 AY675251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.1	1486	Lactobacillus suntoryeus str. M4 AY644397.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99	1486	Lactobacillus suntoryeus str. LH AY675248.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
CLUSTER0(77)_SCTG5625	100	1486	Lactobacillus helveticus AY369116.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.6	1486	Lactobacillus gallinarum str. ATCC 33199 AJ417737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.4	1486	Lactobacillus suntoryeus str. LH5 AY675251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.4	1486	Lactobacillus suntoryeus str. M4 AY644397.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.3	1486	Lactobacillus suntoryeus str. LH AY675248.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
CLUSTER0(77)_SCTG5646	100	1486	Lactobacillus helveticus AY369116.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.6	1486	Lactobacillus gallinarum str. ATCC 33199 AJ417737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.4	1486	Lactobacillus suntoryeus str. LH5 AY675251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.4	1486	Lactobacillus suntoryeus str. M4 AY644397.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	99.3	1486	Lactobacillus suntoryeus str. LH AY675248.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
CLUSTER1(1)_SCTG5601	94.8	1260	Lactobacillus helveticus AY369116.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	94.4	1260	Lactobacillus gallinarum str. ATCC 33199 AJ417737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	94.3	1260	Lactobacillus suntoryeus str. LH5 AY675251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	94.2	1260	Lactobacillus suntoryeus str. SA AY445815.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	94.2	1260	Lactobacillus suntoryeus str. M4 AY644397.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
CLUSTER2(1)_SCTG5600	96.9	1464	Lactobacillus helveticus AY369116.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	96.5	1464	Lactobacillus gallinarum str. ATCC 33199 AJ417737.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	96.4	1464	Lactobacillus suntoryeus str. M4 AY644397.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	96.3	1464	Lactobacillus suntoryeus str. LH5 AY675251.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)
	96.4	1454	Lactobacillus suntoryeus str. SA AY445815.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus delbrueckii et a)