| Cluster Rep ID | Pct-Id | Align len | Hit |
| CLUSTER1(50)_SAWT390 | 99.3 | 1411 | coal effluent wetland clone ARCP160 AF523941.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Eplasma) |
| 92.1 | 1050 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.6 | 190 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 92 | 1051 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 341 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.8 | 1043 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.8 | 291 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.9 | 870 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 92.9 | 339 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 86.4 | 169 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| CLUSTER1(50)_SAWT392 | 99.1 | 1409 | coal effluent wetland clone ARCP160 AF523941.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Eplasma) |
| 91.9 | 1049 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 189 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.8 | 1050 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 340 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.6 | 1043 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.8 | 291 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.7 | 870 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 92.9 | 339 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 86.4 | 169 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| CLUSTER1(50)_SAWT422 | 99.3 | 1401 | coal effluent wetland clone ARCP160 AF523941.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Eplasma) |
| 92 | 1041 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 189 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.9 | 1042 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 340 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.8 | 1043 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.8 | 291 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 91.4 | 1040 | acid mine drainage clone AS4 AF544223.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Dplasma) |
| 94.3 | 279 | acid mine drainage clone AS4 AF544223.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Dplasma) |
| CLUSTER1(50)_SAWT436 | 99.3 | 1409 | coal effluent wetland clone ARCP160 AF523941.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Eplasma) |
| 92.1 | 1049 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 189 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 92 | 1050 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.5 | 340 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 91.8 | 1043 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.8 | 291 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.9 | 870 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 92.9 | 339 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 86.4 | 169 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| CLUSTER0(28)_SAWT428 | 99.7 | 1409 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 98.9 | 1413 | coal effluent wetland clone ARCP128 AF523940.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 95.7 | 1410 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 94.6 | 1403 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.8 | 1416 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| CLUSTER0(28)_SAWT432 | 99.7 | 1407 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 98.9 | 1411 | coal effluent wetland clone ARCP128 AF523940.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 95.7 | 1406 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 94.6 | 1403 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.8 | 1412 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| CLUSTER0(28)_SAWT446 | 99.6 | 1409 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 98.9 | 1413 | coal effluent wetland clone ARCP128 AF523940.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 95.6 | 1409 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 94.5 | 1403 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |
| 93.7 | 1415 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| CLUSTER2(3)_SAWT391 | 99.9 | 1415 | coal effluent wetland clone ARCP121 AF523936.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 96.8 | 1421 | acid mine drainage clone AS10 AF544221.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Bplasma) |
| 95.4 | 1408 | acid mine drainage clone ASL1 AF544224.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 94.6 | 1412 | coal effluent wetland clone ARCP128 AF523940.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Aplasma) |
| 93.6 | 1418 | acid mine drainage clone AS1 AF544219.1 (Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Cplasma) |