genelib report for 4001421, SCUY

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Halorubrum lacusprofundi
	genus_species	Halorubrum lacusprofundi
	strain
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Hala_0001
	source_dna_number	4001421
	source_dna_type	Whole Genome
seq_project	project_number	4001421
	project_type	2006 CSP
	draft_analysis_group_des
	deadline	30-SEP-06
seq_library	library_name	SCUY
	library_type	16s ribosomal Archaea
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	1.5
	plates_expected
	depth_target
	insert_user	dscott
	date_entered	08-NOV-05
seq_lib_vector	vector_name	pCR4-TOPO_archaea
shadow_parent	library_name
account	account_no	625909
	account_name	Seq General, Program Management
account_group	account_group	SEQUENCING DEPT ACCOUNTS
institution	code_name
sample	sample_number	113445
	dna_received
	sample_description
	ribosomal_profile

Processing Summary:

Reads Input: 192

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	192	45	42	41	N/A
Failed	0	51	3	1	N/A

Contigs Output: 41

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
26	1
7	1
1	8

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER0(26)_SCUY10465	99.7	1418	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	99.6	1418	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	98.1	1418	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	97.7	1417	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	97.5	1417	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER0(26)_SCUY10466	99.7	1403	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	99.6	1403	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	98.1	1403	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	97.7	1403	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	97.5	1403	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER0(26)_SCUY10471	99.8	1413	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	99.7	1413	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	98.2	1413	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	97.8	1413	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	97.6	1413	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER1(7)_SCUY10525	97.4	966	"Thermotoga subterranea" U22664.1 (Bacteria; Thermotogae; Thermotoga)
	97	960	Thermotoga lettingae str. TMO AF355615.1 (Bacteria; Thermotogae; Thermotoga)
	96.6	961	Thermotoga elfii X80790.1 (Bacteria; Thermotogae; Thermotoga)
	99.5	624	Shigella flexneri 2a str. 301 NC_004337.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.5	624	Shigella flexneri 2a str. 2457T NC_004741.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER2(1)_SCUY10480	91.2	645	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	88.4	507	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	91.2	645	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	88.6	507	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.4	645	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	87.2	507	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.1	645	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	86.6	507	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	89.9	645	haloarchaeon str. PIG.8 AJ270249.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	85.2	507	haloarchaeon str. PIG.8 AJ270249.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER3(1)_SCUY10517	98.6	792	"Thermotoga subterranea" U22664.1 (Bacteria; Thermotogae; Thermotoga)
	88.4	138	"Thermotoga subterranea" U22664.1 (Bacteria; Thermotogae; Thermotoga)
	98	786	Thermotoga lettingae str. TMO AF355615.1 (Bacteria; Thermotogae; Thermotoga)
	87.7	138	Thermotoga lettingae str. TMO AF355615.1 (Bacteria; Thermotogae; Thermotoga)
	97.7	787	Thermotoga elfii X80790.1 (Bacteria; Thermotogae; Thermotoga)
	87.7	138	Thermotoga elfii X80790.1 (Bacteria; Thermotogae; Thermotoga)
	95	817	Escherichia coli str. K12 D83536.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	94.6	817	Salmonella subsp. enterica serovar Typhi str. CT18 subsp. AL627279.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER4(1)_SCUY10512	95	1368	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	94.8	1368	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	93.4	1368	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	93	1368	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	93	1362	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER5(1)_SCUY10486	91.5	693	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	87.4	388	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	91.3	693	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	87.4	388	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.3	693	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	86.3	388	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.2	693	haloarchaeon str. PIG.8 AJ270249.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.5	693	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	86.6	388	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER6(1)_SCUY10510	92	660	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	92	649	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.5	660	haloarchaeon str. PIG.8 AJ270249.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.7	648	haloarchaeon str. PW1.1 AJ270248.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.5	660	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER7(1)_SCUY10477	94.2	952	"Thermotoga subterranea" U22664.1 (Bacteria; Thermotogae; Thermotoga)
	93.6	950	Thermotoga elfii X80790.1 (Bacteria; Thermotogae; Thermotoga)
	93.7	949	Thermotoga lettingae str. TMO AF355615.1 (Bacteria; Thermotogae; Thermotoga)
	98	614	Achromobacter subsp. xylosoxidans str. ATCC 9220 AF411021.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	98	614	Achromobacter xylosoxidans str. AU0665 AF411019.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
CLUSTER8(1)_SCUY10496	96	1402	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	95.9	1402	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	94.4	1402	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	94	1402	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	93.9	1402	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
CLUSTER9(1)_SCUY10481	92.7	1353	Halorubrum lacusprofundi X82170.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	92.8	1353	Halorubrum lacusprofundi U17365.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	91.4	1353	Halorubrum saccharovorum U17364.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	91.1	1353	haloarchaeon str. 54R AJ270251.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)
	90.9	1353	Halorubrum saccharovorum X82167.1 (Archaea; Euryarchaeota; Halobacteria; Halorubrum)