genelib report for 4001422, SCUO

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Methanothermus fervidus
	genus_species	Methanothermus fervidus
	strain
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Mefe_0001
	source_dna_number	4001422
	source_dna_type	Whole Genome
seq_project	project_number	4001422
	project_type	2006 CSP
	draft_analysis_group_des
	deadline	30-SEP-06
seq_library	library_name	SCUO
	library_type	16s ribosomal Bacteria
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	1.5
	plates_expected
	depth_target
	insert_user	dscott
	date_entered	31-OCT-05
seq_lib_vector	vector_name	pCR4-TOPO_eubacteria
shadow_parent	library_name
account	account_no	625909
	account_name	Seq General, Program Management
account_group	account_group	SEQUENCING DEPT ACCOUNTS
institution	code_name
sample	sample_number	113446
	dna_received
	sample_description
	ribosomal_profile

Processing Summary:

Reads Input: 1725

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	1725	474	472	472	N/A
Failed	0	6	2	0	N/A

Contigs Output: 472

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
321	1
37	1
30	1
26	1
21	1
5	1
4	1
3	1
2	5
1	15

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER2(321)_SCUO393	99.9	1464	Escherichia coli J01695.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli str. K-12 M87049.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli V00348.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli str. K12 U00096.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli O157:H7 str. RIMD0509952 AB035925.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER2(321)_SCUO462	99.8	1463	Enterobacter hormaechei subsp. steigerwaltii AJ853890.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.7	1463	soil clone 431-1 AF423262.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.5	1463	soil clone 816-1 AF423294.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.5	1463	soil clone 1389-1 AF423223.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.5	1454	Enterobacter cloacae Nr. 3 Y17665.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER2(321)_SCUO670	99.9	1464	Escherichia coli J01695.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli str. K-12 M87049.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli V00348.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli str. K12 U00096.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1464	Escherichia coli O157:H7 str. RIMD0509952 AB035925.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER2(321)_SCUO709	100	1470	Escherichia coli J01695.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	100	1470	Escherichia coli str. K-12 M87049.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	100	1470	Escherichia coli V00348.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	100	1470	Escherichia coli str. K12 U00096.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	99.9	1470	Escherichia coli O157:H7 str. RIMD0509952 AB035925.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER0(37)_SCUO564	99.9	1460	Stenotrophomonas maltophilia str. e-a21 AJ293470.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1460	Stenotrophomonas maltophilia ON2 AJ306833.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.6	1467	Stenotrophomonas maltophilia str. c6 AJ293468.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1460	Lake Wai'ele'ele water clone LWSR-59 AY345544.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.5	1460	Stenotrophomonas maltophilia str. LMG 957 AJ131114.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
CLUSTER0(37)_SCUO653	99.9	1460	Stenotrophomonas maltophilia str. e-a21 AJ293470.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1467	Stenotrophomonas maltophilia str. c6 AJ293468.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1460	Stenotrophomonas maltophilia ON2 AJ306833.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1460	Lake Wai'ele'ele water clone LWSR-59 AY345544.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.5	1467	Stenotrophomonas maltophilia str. c20 AJ293469.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
CLUSTER0(37)_SCUO697	99.9	1460	Stenotrophomonas maltophilia str. e-a21 AJ293470.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1467	Stenotrophomonas maltophilia str. c6 AJ293468.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1460	Stenotrophomonas maltophilia ON2 AJ306833.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.7	1460	Lake Wai'ele'ele water clone LWSR-59 AY345544.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.5	1467	Stenotrophomonas maltophilia str. c20 AJ293469.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
CLUSTER1(30)_SCUO582	100	1453	Achromobacter subsp. xylosoxidans str. ATCC 9220 AF411021.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	100	1453	Achromobacter xylosoxidans str. AU0665 AF411019.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.9	1453	Achromobacter xylosoxidans str. AU1011 AF411020.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.9	1453	Achromobacter subsp. xylosoxidans str. NFRI-A1 AB161691.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.7	1453	Portugal clone AJ306836.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
CLUSTER1(30)_SCUO651	99.7	1453	Portugal clone AJ306836.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.5	1453	Alcaligenes sp. 151 AJ002802.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.5	1453	Achromobacter subsp. xylosoxidans str. ATCC 9220 AF411021.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.5	1453	Achromobacter xylosoxidans str. AU0665 AF411019.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.5	1453	Achromobacter sp. clone:TSL-17 clone TSL-17 sp. AB076883.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
CLUSTER1(30)_SCUO684	100	1453	Achromobacter subsp. xylosoxidans str. ATCC 9220 AF411021.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	100	1453	Achromobacter xylosoxidans str. AU0665 AF411019.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.9	1453	Achromobacter xylosoxidans str. AU1011 AF411020.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.9	1453	Achromobacter subsp. xylosoxidans str. NFRI-A1 AB161691.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	99.7	1453	Portugal clone AJ306836.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
CLUSTER4(26)_SCUO484	100	1458	Pseudomonas aeruginosa PAO1 NC_002516.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	100	1458	Pseudomonas aeruginosa str. AL98 AJ249451.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	100	1458	Pseudomonas sp. str. Bu34 AF031152.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	100	1458	Pseudomonas aeruginosa str. 1001 AF216704.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	100	1458	Pseudomonas aeruginosa str. 42A2 NCBI 40045 AJ309500.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER4(26)_SCUO608	99.9	1458	Pseudomonas aeruginosa PAO1 NC_002516.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas aeruginosa str. AL98 AJ249451.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas sp. str. Bu34 AF031152.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas aeruginosa str. 1001 AF216704.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas aeruginosa str. 42A2 NCBI 40045 AJ309500.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER4(26)_SCUO688	99.9	1458	Pseudomonas aeruginosa PAO1 NC_002516.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas aeruginosa str. AL98 AJ249451.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas sp. str. Bu34 AF031152.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas aeruginosa str. 1001 AF216704.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
	99.9	1458	Pseudomonas aeruginosa str. 42A2 NCBI 40045 AJ309500.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Pseudomonadaceae)
CLUSTER3(21)_SCUO499	99.8	1455	Comamonas testosteroni M11224.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1455	Comamonas testosteroni str. JCM 10170 AB064318.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1455	Comamonas testosteroni str. MBIC3840 R2 AB007996.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1455	Comamonas testosteroni str. MBIC3841 R5 AB007997.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1454	Comamonas testosteroni SB3 AJ606335.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
CLUSTER3(21)_SCUO500	99.8	1455	Comamonas testosteroni M11224.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1455	Comamonas testosteroni str. JCM 10170 AB064318.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1455	Comamonas testosteroni str. MBIC3840 R2 AB007996.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1455	Comamonas testosteroni str. MBIC3841 R5 AB007997.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1454	Comamonas testosteroni SB3 AJ606335.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
CLUSTER16(5)_SCUO680	99.9	1455	Delftia tsuruhatensis str. HR4 AY302438.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1454	rice rhizoplane isolate str. RRP3-34 AJ536680.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1454	rice rhizoplane isolate str. RRP2-8 AJ536681.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1454	bulk rice field soil isolate str. RBS3-89 AJ536682.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1454	rice rhizoplane isolate str. RRP-E3 AJ536683.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
CLUSTER10(4)_SCUO528	99.9	1458	Stenotrophomonas sp. str. LMG 19833 AJ300772.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.8	1459	Stenotrophomonas acidaminiphila str. ATCC 700917 AF273079.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.8	1459	Stenotrophomonas acidaminiphila str. AMX19 AF273080.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99.9	1457	Stenotrophomonas sp. str. BO AF156709.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
	99	1459	Waste-gas biofilter clone BIgi7 AJ318138.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Xanthomonadales; Stenotrophomonas)
CLUSTER8(3)_SCUO540	99.9	1412	patient's bronchoalveolar lavage isolate str. MDA2507 sp. AY238333.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	93.6	1258	CFB group isolate str. A1002 AF236015.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	93.4	1251	water 20 m downstream manure clone 150ds20 AY212601.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	92.6	1262	water 20 m downstream manure clone 167ds20 AY212618.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	93.5	139	water 20 m downstream manure clone 167ds20 AY212618.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	92.2	1262	Flavobacterium aquatile M62797.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
CLUSTER12(2)_SCUO567	99.9	1479	Exiguobacterium sp. str. BTAH1 AY205564.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Exiguobacterium)
	99.5	1484	Exiguobacterium sp. str. JL-42 AY745848.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Exiguobacterium)
	99.5	1484	Exiguobacterium sp. str. JL-35 AY745864.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Exiguobacterium)
	99.5	1484	Exiguobacterium sp. str. JL-25 AY745823.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Exiguobacterium)
	99.5	1484	Exiguobacterium sp. str. JL-36 AY745858.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Exiguobacterium)
CLUSTER17(2)_SCUO9699	99.5	1474	Bacillus fusiformis str. Z1 AY548950.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Planococcaceae)
	99.3	1474	Bacillus macroides str. LMG 18474 AJ628749.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Planococcaceae)
	99.4	1474	Bacillus fusiformis str. S3 AY548954.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Planococcaceae)
	99.3	1474	Bacillus fusiformis str. S10 AY548956.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Planococcaceae)
	99.3	1474	Bacillus sp. str. TUT1008 AB098577.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Planococcaceae)
CLUSTER19(2)_SCUO510	99.6	1455	Acinetobacter radioresistens X81666.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.6	1437	glacial ice isolate str. G50-TB2 AF479352.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.5	1434	glacial ice isolate str. SB150-2A1 AF479373.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.6	1408	Acinetobacter radioresistens str. M 17694T Group twelve Z93445.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.1	1438	glacial ice isolate str. AF479323.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
CLUSTER20(2)_SCUO652	99.5	1466	subgingival dental plaque isolate str. A08KA sp. AY005031.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales)
	99.5	1341	electricity-generating microbial fuel cell clone MFC-EB5 AJ630275.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales)
	98.5	1321	electricity-generating microbial fuel cell clone MFC-EB20 AJ630288.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales)
	95.5	1400	water 10 m downstream manure clone 249ds10 AY212697.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales)
	95.6	1376	aerobic phosphorus-removal ecosystem clone PHOS-HE23 AF314420.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Rhodocyclales)
CLUSTER6(2)_SCUO460	98.9	1472	Jeotgalicoccus halotolerans str. YKJ-101 AY028925.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae)
	97.4	1474	Jeotgalicoccus psychrophilus str. YKJ-115 AY028926.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae)
	98.7	1349	lacustrine subsurface sediment clone GL178.18 AY038633.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae)
	97.4	1293	deep-sea sediment isolate str. P_wp0225 AY188939.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae)
	94.2	154	deep-sea sediment isolate str. P_wp0225 AY188939.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae)
	93.5	1269	Macrococcus brunensis str. CCM 4811 AY119686.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Staphylococcaceae; Macrococcus)
CLUSTER11(1)_SCUO545	96.9	1471	Escherichia coli J01695.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	96.9	1471	Escherichia coli str. K-12 M87049.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	96.9	1471	Escherichia coli V00348.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	96.9	1471	Escherichia coli str. K12 U00096.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	96.9	1468	phylotype OTU-1 swine intestine clone p-229-o5 AF371848.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER13(1)_SCUO606	95.1	1465	Escherichia coli J01695.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	95.1	1465	Escherichia coli str. K-12 M87049.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	95.1	1465	Escherichia coli V00348.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	95.1	1465	Escherichia coli str. K12 U00096.2 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	95	1465	Escherichia coli O157:H7 str. RIMD0509952 AB035925.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER14(1)_SCUO694	99.1	1410	Sphingomonas sp. JRL-5 5 AF181572.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingopyxis)
	99.3	1361	Sphingomonas sp. str. 86 AY177366.2 (Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingopyxis)
	98.6	1393	Sphingopyxis composta str. Kw07 AY563034.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingopyxis)
	98.6	1393	Sphingomonas sp. str. Kw07 AB187587.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingopyxis)
	98.3	1412	Sphingomonas sp. str. KT-1 AB022601.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingopyxis)
CLUSTER15(1)_SCUO524	94.6	1371	pink microbial mat clone YJQ-8 AY569285.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	94.1	1371	heating system biofilm clone SK8EF AY753402.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	94	1370	Alkaliphilus crotonatoxidans str. B11-2 AF467248.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	93.9	1368	Alkaliphilus sp. 1 AY554415.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	94.4	1299	Alkaliphilus transvaalensis str. SAGM1 AB037677.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
CLUSTER18(1)_SCUO526	93.7	1431	patient's bronchoalveolar lavage isolate str. MDA2507 sp. AY238333.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	87.9	1391	water 20 m upstream manure clone 15up AY212611.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	89	784	Flavobacterium sp. str. A265 U85888.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	87.4	437	Flavobacterium sp. str. A265 U85888.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	89	784	Flavobacterium sp. str. A265 U85888.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	87.4	437	Flavobacterium sp. str. A265 U85888.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
	88.7	849	freshwater clone PRD01b006B AF289166.1 (Bacteria; Bacteroidetes; Flavobacteriales; Sporocytophaga)
CLUSTER21(1)_SCUO672	99.9	1385	Brevundimonas diminuta X87274.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
	99.8	1385	Brevundimonas diminuta str. LMG 2089 (T) AJ227778.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
	99.6	1382	Brevundimonas diminuta M59064.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
	99.9	1366	deepest sea mud Mariana Trench clone AB002633.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
	99.7	1377	Nitrobacteria iranicum str. 101 AY578913.1 (Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales)
CLUSTER22(1)_SCUO707	99.6	1455	Acinetobacter sp. str. 'anoxic' AY055373.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.5	1455	MM_2339 AJ244765.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.5	1455	activated sludge clone T17 Z93992.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.4	1455	MM_2349 AJ244764.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
	99.5	1455	extracted transducing cf. Acinetobacter johnsonii clone BioIuz K32 proteobacterium AF324537.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Moraxellaceae; Acinetobacter)
CLUSTER23(1)_SCUO679	94.3	1467	Shigella sonnei X96964.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	94.3	1467	intestine Zophobas mori clone AJ487022.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	94.2	1467	Shigella flexneri X96963.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	94.1	1467	Escherichia coli L10328.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
	94.1	1467	Shigella flexneri 2a str. 2457T AE016990.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Enterobacteriales)
CLUSTER24(1)_SCUO9767	96	1432	-temperature biodegraded Canadian oil reservoir clone PL-5B8 AY570591.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	96.6	1370	mesophilic anaerobic BSA digester clone BSA1B-05 AB175359.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	96	1435	Sedimentibacter saalensis AJ404680.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	95.6	1371	Sedimentibacter hydroxybenzoicus L11305.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
	94.8	1396	Sedimentibacter sp. str. BRS2 AY221992.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Peptostreptococcaceae)
CLUSTER25(1)_SCUO487	99.9	1447	Microbacterium paraoxydans str. CF36 AJ491806.1 (Bacteria; Actinobacteria; Actinobacteridae; Microbacteriaceae)
	99.8	1447	Microbacterium sp. str. CME1 AY547556.1 (Bacteria; Actinobacteria; Actinobacteridae; Microbacteriaceae)
	99.5	1447	Microbacterium sp. str. AS-44 AJ391205.1 (Bacteria; Actinobacteria; Actinobacteridae; Microbacteriaceae)
	99.7	1436	Microbacterium oxydans str. S28n AY509223.1 (Bacteria; Actinobacteria; Actinobacteridae; Microbacteriaceae)
	99.4	1447	Microbacterium sp. str. VKM Ac-2051 AB042085.1 (Bacteria; Actinobacteria; Actinobacteridae; Microbacteriaceae)
CLUSTER26(1)_SCUO561	92.4	1253	decayed velvetleaf seed clone S1-4-CL9 AY728066.1 (Bacteria; Bacteroidetes; Saprospiraceae)
	92.9	1201	EBPR sludge lab scale clone LPB08 AF527580.1 (Bacteria; Bacteroidetes; Saprospiraceae)
	92	1255	sedimentary rock clone MIZ31 AB179522.1 (Bacteria; Bacteroidetes; Saprospiraceae)
	98.1	105	sedimentary rock clone MIZ31 AB179522.1 (Bacteria; Bacteroidetes; Saprospiraceae)
	91.7	1252	lake water clone S10.17 AY752128.1 (Bacteria; Bacteroidetes; Saprospiraceae)
	91.3	1251	lake water clone SW11 AJ575719.1 (Bacteria; Bacteroidetes; Saprospiraceae)
CLUSTER27(1)_SCUO681	99.8	1479	Bacillus anthracis str. Sterne AF176321.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
	99.8	1479	Bacillus anthracis AF155951.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
	99.8	1479	Bacillus anthracis str. Ames AF155950.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
	99.8	1479	Bacillus thuringiensis str. B8 AF155955.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
	99.8	1479	Bacillus cereus str. 2000031503 AY138277.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Bacillaceae/Planococcaceae; Bacillus cereus et al.)
CLUSTER5(1)_SCUO9768	96.7	1450	Achromobacter subsp. xylosoxidans str. ATCC 9220 AF411021.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	96.7	1450	Achromobacter xylosoxidans str. AU0665 AF411019.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	96.6	1450	Achromobacter xylosoxidans str. AU1011 AF411020.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	96.6	1450	Achromobacter subsp. xylosoxidans str. NFRI-A1 AB161691.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
	96.3	1450	Portugal clone AJ306836.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae)
CLUSTER7(1)_SCUO9751	99.5	1454	Clostridium celerecrescens X71848.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
	99.7	1447	Clostridium sp. str. ArC5 AF443594.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
	99.5	1454	Clostridium sp. str. CITR8 AY221993.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
	99.6	1446	Clostridium celerecrescens AJ295659.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
	99.4	1454	Portuguese dry smoked sausages (chouricos) type Ribatejano isolate str. Te63R AY587830.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Lachnospiraceae; Clostridium sphenoides et al.)
CLUSTER9(1)_SCUO410	98.7	1489	Streptococcus suis str. 89-4109-1 AF009501.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus)
	98.6	1477	Streptococcus suis str. 86-5192 AF009495.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus)
	98.6	1466	Streptococcus bovis str. NCDO2127 AF429766.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus)
	98.3	1491	Streptococcus suis str. SAP 77 AF284578.2 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus)
	98.6	1467	cf. Streptococcus suis clone Welshpool 44 AF290487.1 (Bacteria; Firmicutes (incl. basal lineag; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus)