genelib report for 4001426, SCCF

Library Information (from Project Tracking System DB):

bio_class_genus_species	bio_classification_type	Single Organism
	bio_classification_name	Acidovorax JS42
	genus_species	Acidovorax
	strain	JS42
source_library	source_library_name
	vector_name
source_dna	source_dna_name	Acid_0001
	source_dna_number	4001426
	source_dna_type	Whole Genome
seq_project	project_number	4001426
	project_type	2006 CSP
	draft_analysis_group_des
	deadline	30-SEP-06
seq_library	library_name	SCCF
	library_type	16s ribosomal Bacteria
	sequencing_type	Ribosomal
	internal_customer	Ribosomal Sequencing
	re_array
	insert_size_type	small
	target_insert_size	1.5
	plates_expected
	depth_target
	insert_user	dscott
	date_entered	19-AUG-05
seq_lib_vector	vector_name	pCR4-TOPO_eubacteria
shadow_parent	library_name
account	account_no	625909
	account_name	Seq General, Program Management
account_group	account_group	SEQUENCING DEPT ACCOUNTS
institution	code_name
sample	sample_number	113449
	dna_received
	sample_description
	ribosomal_profile

Processing Summary:

Reads Input: 192

	Read Pairing	Assemble	Qual Filters	Blast Filter	Chimera Checking
Passed	192	94	94	94	N/A
Failed	0	2	0	0	N/A

Contigs Output: 94

Number of Cluster by Size (Number of Members)

Size	Number of Clusters
94	1

Cluster Representatives Blast Hits

Cluster Rep ID	Pct-Id	Align len	Hit
CLUSTER0(94)_SCCF399	100	1456	Acidovorax sp. str. 3DHB1 AF458096.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1456	Diaphorobacter nitroreducens str. NA10B AB064317.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1456	anaerobic sludge clone OS1L-9 AB076866.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1456	-temperature biodegraded Canadian oil reservoir clone PL-30B5 AY570616.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1455	Acidovorax sp. str. LW1 AJ130765.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
CLUSTER0(94)_SCCF417	100	1451	Acidovorax sp. str. 3DHB1 AF458096.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	Diaphorobacter nitroreducens str. NA10B AB064317.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	anaerobic sludge clone OS1L-9 AB076866.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	-temperature biodegraded Canadian oil reservoir clone PL-30B5 AY570616.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1450	Acidovorax sp. str. LW1 AJ130765.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
CLUSTER0(94)_SCCF419	99.9	1451	Acidovorax sp. str. 3DHB1 AF458096.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1451	Diaphorobacter nitroreducens str. NA10B AB064317.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1451	anaerobic sludge clone OS1L-9 AB076866.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.8	1451	-temperature biodegraded Canadian oil reservoir clone PL-30B5 AY570616.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.7	1451	Acidovorax sp. str. LW1 AJ130765.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
CLUSTER0(94)_SCCF441	100	1451	Acidovorax sp. str. 3DHB1 AF458096.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	Diaphorobacter nitroreducens str. NA10B AB064317.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	anaerobic sludge clone OS1L-9 AB076866.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	-temperature biodegraded Canadian oil reservoir clone PL-30B5 AY570616.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)
	99.9	1451	Acidovorax sp. str. LW1 AJ130765.1 (Bacteria; Proteobacteria; Gamma(beta)proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae)