genelib report for 4001441, SFBU

Library Information (from Project Tracking System DB):

bio_class_genus_speciesbio_classification_typeSingle Organism
bio_classification_nameMycosphaerella fijiensis
genus_speciesMycosphaerella fijiensis
strain
source_librarysource_library_name
vector_name
source_dnasource_dna_nameMyfi_0001
source_dna_number4001441
source_dna_typeWhole Genome
seq_projectproject_number4001441
project_type2006 CSP
draft_analysis_group_des
deadline30-SEP-05
seq_librarylibrary_nameSFBU
library_type18s ribosomal Eukarya
sequencing_typeRibosomal
internal_customerRibosomal Sequencing
re_array
insert_size_typesmall
target_insert_size.7
plates_expected
depth_target
insert_userdscott
date_entered13-JAN-06
seq_lib_vectorvector_namepCR4-TOPO_eukarya
shadow_parentlibrary_name
accountaccount_no625909
account_nameSeq General, Program Management
account_groupaccount_groupSEQUENCING DEPT ACCOUNTS
institutioncode_name
samplesample_number113452
dna_received
sample_description
ribosomal_profile

Processing Summary:

Reads Input: 192

Read PairingAssembleQual FiltersBlast FilterChimera Checking
Passed192939292N/A
Failed0310N/A

Contigs Output: 92

Number of Cluster by Size (Number of Members)

SizeNumber of Clusters
761
52
41
12

Cluster Representatives Blast Hits

Cluster Rep IDPct-IdAlign lenHit
CLUSTER1(76)_SFBU398100870gi|38201505|gb|AY357266.1| Anguillospora rubescens strain CCM F-11298 18S ribosomal RNA gene, partial sequence
99.8870gi|28412358|gb|AY190258.1| Dothideomycete sp. G17-R295 18S ribosomal RNA gene, partial sequence
99.8870gi|28412359|gb|AY190259.1| Dothideomycete sp. G17-R297 18S ribosomal RNA gene, partial sequence
99870gi|32347263|gb|AY220611.1| Capnobotryella renispora UAMH 9870 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99870gi|32347264|gb|AY220612.1| Capnobotryella renispora CBS 214.90 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
CLUSTER1(76)_SFBU401100865gi|38201505|gb|AY357266.1| Anguillospora rubescens strain CCM F-11298 18S ribosomal RNA gene, partial sequence
99.8865gi|28412358|gb|AY190258.1| Dothideomycete sp. G17-R295 18S ribosomal RNA gene, partial sequence
99.8865gi|28412359|gb|AY190259.1| Dothideomycete sp. G17-R297 18S ribosomal RNA gene, partial sequence
99865gi|32347263|gb|AY220611.1| Capnobotryella renispora UAMH 9870 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99865gi|32347264|gb|AY220612.1| Capnobotryella renispora CBS 214.90 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
CLUSTER1(76)_SFBU425100869gi|38201505|gb|AY357266.1| Anguillospora rubescens strain CCM F-11298 18S ribosomal RNA gene, partial sequence
99.8869gi|28412358|gb|AY190258.1| Dothideomycete sp. G17-R295 18S ribosomal RNA gene, partial sequence
99.8869gi|28412359|gb|AY190259.1| Dothideomycete sp. G17-R297 18S ribosomal RNA gene, partial sequence
99869gi|32347263|gb|AY220611.1| Capnobotryella renispora UAMH 9870 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99869gi|32347264|gb|AY220612.1| Capnobotryella renispora CBS 214.90 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
CLUSTER1(76)_SFBU441100872gi|38201505|gb|AY357266.1| Anguillospora rubescens strain CCM F-11298 18S ribosomal RNA gene, partial sequence
99.8872gi|28412358|gb|AY190258.1| Dothideomycete sp. G17-R295 18S ribosomal RNA gene, partial sequence
99.8872gi|28412359|gb|AY190259.1| Dothideomycete sp. G17-R297 18S ribosomal RNA gene, partial sequence
99872gi|32347263|gb|AY220611.1| Capnobotryella renispora UAMH 9870 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
99872gi|32347264|gb|AY220612.1| Capnobotryella renispora CBS 214.90 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
CLUSTER0(5)_SFBU41099.9871Filobasidium floriforme#1758 bp##rna
99.7871gi|24742990|emb|AJ515167.1|UBA515167 Uncultured soil basidiomycete partial 18S rRNA gene, clone r90-02
97.9871gi|46405612|gb|AY520208.1| Basidiomycete yeast sp. BG02-5-23-001-C2 18S ribosomal RNA gene, partial sequence
97.9863gi|23504804|emb|AJ506031.1|URH506031 Uncultured rhizosphere basidiomycete partial 18S rRNA gene, clone RSC-CHU-60
97.7873gi|23504770|emb|AJ505997.1|URH505997 Uncultured rhizosphere basidiomycete partial 18S rRNA gene, clone RSC-CHU-13
CLUSTER3(5)_SFBU43399.7859Chytridiomycetes sp.#1726 bp##rna
99.3549gi|6707256|gb|AH009052.1|SEG_AF164301S Batrachochytrium dendrobatidis 18S ribosomal RNA and 18S ribosomal RNA genes, partial sequence
100274gi|6707256|gb|AH009052.1|SEG_AF164301S Batrachochytrium dendrobatidis 18S ribosomal RNA and 18S ribosomal RNA genes, partial sequence
99.3548gi|6707184|gb|AF164301.1|AF164301S1 Batrachochytrium dendrobatidis 18S ribosomal RNA gene, partial sequence
92.9606gi|49066425|gb|AY635826.1| Entophlyctis helioformis isolate AFTOL-ID 40 18S ribosomal RNA gene, partial sequence
92.6606gi|49066429|gb|AY635830.1| Catenomyces sp. JEL342 isolate AFTOL-ID 47 18S ribosomal RNA gene, partial sequence
CLUSTER2(4)_SFBU422100874gi|4835919|gb|AF141949.1| Fusarium equiseti 18S ribosomal RNA, partial sequence
100874Fusarium equiseti#1477 bp##rna
99.5874gi|4835917|gb|AF141947.1| Fusarium cerealis 18S ribosomal RNA, partial sequence
99.5874Fusarium cerealis#1477 bp##rna
99.4874gi|6979791|gb|AF219122.1|AF219122 Fusarium oxysporum f. sp. vasinfectum isolate Ag149-I 18S ribosomal RNA gene, partial sequence
CLUSTER4(1)_SFBU39188.9687gi|38201505|gb|AY357266.1| Anguillospora rubescens strain CCM F-11298 18S ribosomal RNA gene, partial sequence
89.1688gi|3779186|gb|U77668.1|CBU77668 Coccodinium bartschii 18S ribosomal RNA gene, partial sequence
89.1688Coccodinium bartschii#1719 bp##rna
88.8687gi|28412358|gb|AY190258.1| Dothideomycete sp. G17-R295 18S ribosomal RNA gene, partial sequence
88.8687gi|28412359|gb|AY190259.1| Dothideomycete sp. G17-R297 18S ribosomal RNA gene, partial sequence
CLUSTER5(1)_SFBU42697.2863Filobasidium floriforme#1758 bp##rna
97863gi|24742990|emb|AJ515167.1|UBA515167 Uncultured soil basidiomycete partial 18S rRNA gene, clone r90-02
95.5863gi|46405612|gb|AY520208.1| Basidiomycete yeast sp. BG02-5-23-001-C2 18S ribosomal RNA gene, partial sequence
95.2855gi|23504804|emb|AJ506031.1|URH506031 Uncultured rhizosphere basidiomycete partial 18S rRNA gene, clone RSC-CHU-60
95865gi|23504770|emb|AJ505997.1|URH505997 Uncultured rhizosphere basidiomycete partial 18S rRNA gene, clone RSC-CHU-13